cnfn (LOC106605555)


Basic Information

Item Value
gene id cnfn
gene name LOC106605555
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 21645294 ~ 21647486 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623793.2
TCATGGAAATGGCATTGTCACCATATGATGATGTCACCATGGGTATAAGAGCAAAGGGCCCCGTGGCGCTCCCATTCACAGCTTTTCCCAAAGCTCACCCAGGATATCTAAGGCCCCAGTGGAGACTGACAGGAATTGAGCACCAGCAGTAATGGCTTATCAGAGTGAGATGGTGATCAGCTCCCAGCCTCAGGTCACCATCAACAACTACACCGTGACCTCCTCTGGGTCCTCAGATTGGAGCTCCAACGTTTGTGACTGCTGCGATGACTGCGGCATCTGTCTGTGTGCGATCTTCGTGCCCTGTATCCTGGGTTGTAAAGTTGCACAGGACAATGGGGACAGTTGCTGTGTGCCTTTCCTCCCTGGAGCTTTGATCGCCCTGAGGACAAGCATCCGGAGCAAATACAGCATCTCTGGTTCCGTGTGTGATGACTGGGTAGTTATGACCTGCCTGCCTTTCTGCGGACTCTGTCAGATGGCCAGGGAGCAGAAGATGAGAGGCTGATCGGTTAAATGAGGGGAATAGGTACAGGCTTAATGGCAATCATGCATCCAGTCATGGGAAAAAAAACACAGTGTGCCTTCTGACGTCACAGGTACGATGTCACAGCCTGGTTGGAATATCCTATGCTTTGAACACAACTTTGTTGAAGTATTGCCTTGACTGTGGCCAGTCCATCATATATTTATTATGGGCTGTGCAATACTTTTAAAATATCATTATACTACTAAAGAACCGTACCTTAAACTATACATTATAGTTTACTACTATGAGGCACTTTATATAGTGGTGTTTTTTCTATCATTATCCAATGGTGTGTATTTGCTTGTCGGAAAATGACCTGATTGAGATGtttcagatttcaataaagcacAATTTTCACATTCAAAAGAAAGTTGTTCTTCACTTTTTTTCATTTccatagagatggagaggaacatcCAGGGGTAGAAAAGTCAAGAATGTGCTTTTCTACCAAAGCTTTTTTTGGCACATTCTTGACTGGAGTCCCTGGGTTTTCTTCTCCCTCTCGATGTAAATAAAGAACAATAAATGGAGAGCAACTTTCAATTGAATGTGTCCCATGACTTCGG

Function

NR:

description
cornifelin homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623793.2 True 1098 mRNA 0.45 4 21645294 21647486

Neighbor

gene id symbol gene type direction distance location
LOC110534450 LOC106605556 coding downstream 11649 21631390 ~ 21633645 (-)
LOC118944069 LOC106605559 coding downstream 48759 21595236 ~ 21596535 (-)
LOC110534443 LOC106605563 coding downstream 50824 21586978 ~ 21594470 (-)
LOC118938339 LOC106605559 coding downstream 58438 21578149 ~ 21586856 (-)
LOC110537611 NA coding downstream 89427 21553518 ~ 21555867 (-)
LOC110537643 LOC106605567 coding upstream 65519 21713005 ~ 21721635 (-)
LOC110537847 mrpl17 coding upstream 468163 22114700 ~ 22118083 (-)
LOC110537842 NA coding upstream 473093 22120579 ~ 22157534 (-)
LOC110537803 LOC106577461 coding upstream 525206 22172692 ~ 22175353 (-)
LOC110537752 LOC106577440 coding upstream 534359 22180756 ~ 22198840 (-)
G121756 NA non-coding downstream 98257 21490267 ~ 21547037 (-)
G121754 NA non-coding downstream 159795 21483135 ~ 21485499 (-)
G121739 NA non-coding downstream 182023 21463050 ~ 21463271 (-)
G121590 NA non-coding downstream 228347 21416552 ~ 21416947 (-)
G121848 NA non-coding upstream 20733 21668219 ~ 21671696 (-)
G121851 NA non-coding upstream 25302 21672788 ~ 21673005 (-)
G121847 LOC106605554 non-coding upstream 26468 21673954 ~ 21676881 (-)
G121863 NA non-coding upstream 35978 21683464 ~ 21683681 (-)
G121867 NA non-coding upstream 37128 21684614 ~ 21684847 (-)
G121738 NA other downstream 182264 21462693 ~ 21463030 (-)
G121533 LOC106583873 other downstream 298607 21288616 ~ 21346687 (-)
G121421 LOC106576258 other downstream 586445 21056598 ~ 21058849 (-)
G121208 NA other downstream 1017594 20626557 ~ 20627700 (-)
G122733 LOC106592382 other upstream 149021 21796507 ~ 21812432 (-)
G122761 LOC106578847 other upstream 203947 21851433 ~ 21856413 (-)
G122829 LOC106605673 other upstream 378813 22026299 ~ 22027717 (-)
G122972 NA other upstream 728667 22376153 ~ 22378160 (-)

Expression


Co-expression Network