LOC110537757 (LOC106605699)


Basic Information

Item Value
gene id LOC110537757
gene name LOC106605699
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 22077990 ~ 22115281 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036942152.1
CACATGCATCGGCAAAAGACGAGAACGCGCGCCCTGTGTCTTCTCTGCTTCCCTCTCGGATACTGTCGTTTCCTGCATTCTAGTTGATTGGCAAGTGGGGCCGGGACGACCACTGAGTAGCGAAATCCTGGTATAAGATGGAGGTTTGTGAGAGACTTTTGTGCCTGGCCGTGGTGTCCAGCGTTCTCTGCGTTGGCTCGGTTCTGGGGAAATACGTGAGAGGTATCGTCAATACCAAGGAGGACTGGCTGTTCCTTACTCGCTTCTGTTTTCTCACTGATTTTGGACGTCTGGACTTCCGGTTCCGCTACCAAAAGtCGCGATGCTGTCAGAATATATTGCTCTACTTTGATGACAGCTCTCAGTGGCCAGCTGTGTACAAGAAGCCAGACAAGGACTGCTACCAGAAGGAGGCGGTGTTGAGACCAGAGAATAACCAGGTTATCAACCTGACCACACGCTACACCTGGTCTGGCTGTGTGgtggaaggagagggagatgaggaggtgcTGAGTTGTGTGGGAGGTCGTAGTTTCCGCTCggtgagggagagatggtggtACATCGCTCTCAGCAAGTGTGGGGGGGAAGGTTTGCAGCTGGAGTATGAGATGAAGCTGACCAATGGCCAGTCTTTCTGGACACAGCATTTCTCTGCAGACGAGTTTGGGATCCTGGAAACTGACATCACGTTCCTGGTTATCTTCTCCCTGGTCTTCATCCTCTCATGTTATTTTGCCTATAATCTGAAAGGAAGGCAGCTTCTCCATACGACATATAAGATGTTTATGACTGCGGCTGGTGTAGAGGttGTTAGCCTTCTGTTCCACTGTATCTACTGGGGCCTGTATGCCAGAGATGGAGTGGGCAACGGCAGTCTCAAGATAATGGggaaaTTACTGTTCTCTGTCAGTTTCCTGGTGTTCCTGCTGATGCTGATCCTGCTGGGAAAAGGCTTCACTGTCACCAGGGCGAGGATCAGCCACAGTGGATCTGTCAAGCTGTCCATCTACATGACAGTCTACACCGTCACCTATATCATCCTCTTCATATACGAGGCAGAGttcTTTGACCCAGGTGAGGTGCTGTATGCATATGACAGCCCGGCGGGCTACGGTCTGATGGGTCTCCAGCTGCTGGCCTACGTGTGGTTCTGCTACGCCGTCCTGATCTCCCTCAAACACTACCCTGAGAAACAACCCTTCTACATCCCCTTCTTCACGGCATACACACTCTGGTTTTTCGCTGTGCCCGTCATGGCTCTGATAGCTAACTTTGGCATCCCTCGCTGGGCACGGGAGAAGATCGTCAACGGCATCCAACTGGGAATCCACCTCTATGCTCACATCGTATTCCTCGCTATCACTCGGCCCTCTGCGGCCAATAAGAACTTCCCGTACCACGTGCGGACCTCTCAGATCGGGATCCTACTCTCTAGTCCGAAGGCGGGTGTGGCGAGTGAGAGTTTCCCCCACCATGCCTATGGGAACAGCTCCTTCCTGGGCGACTCCCAGCCCAACTTCACAGAACTCTTCTCCATCCAGTCGGGCCCAGTGAAGACGGTGGAGGAGACGGTGGCCCGGAAGGGACAGGAAGTGCAGAGGAACAGTGAGCATAAGATCATCACCACCACGGCCGACCTGTCGTTACCCACCTtccccccactccctccccccaTGCCCACCcgcctctccccccctccccctccacaacTCCCCTCCCACTTCACTGAGTACTTCAGCATGCAGGGGGGAGGGGGCATGGGCACCAAGgcatgagacagacagagagaaagaaagagggacacagagagaaagatcaCGAGGGAGGTGAAGATCAGGTAGCATAGAAAACAGGTCAAGCTATGTATAGCcacgagggaaggagggagggatatgaggaggaagagaaggggaagTCATTATAAGCAGACATGTGGAATGGAAATCCTAAATGTCCCATTTTGACCTCGGAATGGGAAAAAAGCTGAATAAAGAAGAGGATATGGCTGTGAGTTAAAGTGCTGAGCTTGTAAAAGAAAAAAGAAGCAATAAATATTTGAACATGAGCAGGGAGAGAGGCTGGAGAGTGGAGACTGAACAAAACTCCTATGAACACTTTTATTCAAGAATTTATAAGGCATCAATGGAGAGGCTGAGGGAAACGTGTAAATAGCTGAAGAGAATGAGTTACCATTACTCTAAAATAGTTGCAGAGTTTATATTACAAAAGGGATGTTTTTTCCCACATTGTCGAATTCCAAGTGATGCTGTGACCATTGCAATTCTCATGCCATTACATTGTACAAGAGTAAAATATTCACTCACACCctgaaacatacattttttttcttcatgtttGACAGATGTTAACACAAAATATAGAATTTCTCCATATAGAATATGTTGGGATGATTTATATTCTTATATATGTTGATTGCTCCAGGCTATAGGATTGATATACTGATGTTTAAGTGTACAATGTTCAGTTTACTGTGGACCACTGAGGTACGGCTAAAACAAGCATGTACTCCCTGTCTCTAAACTGATTATACTCCATGTGTTCATACAGTGCGTGTGCCTGTTGTACCAAACTACTATACAATAGCTGTGTATATTTCATACCATATAGGCTACCGAGGTGTTAATGTCACTTCTTCTCGATTTCTATTGGAACCTTATGTTACCTTATGTCATACTGTCCACAGACAACTGTTTTAACTCAGAATATTACTGTTCAGTTTTCACTGGAGTGCAAGATATTAGCTTGCTCTGAATGTAATTCCTTGATGTATGTAGACCTTGGTGAATGTATTAATGCAATAGAGCACAGGGAAAGGGGTGGTTTTAaagttaaattattattttttacatagaAATCATACTTATAGCTTGTTTTACTTTCAATTTCAGCCTCCGTCCTTGACACATGATTTAAGGAGGGAAAGTTGTCCAGCGAGGATGTGaactaacttcacaatcaccccccccccccccccccccccccgactagTATGTAATGATGTCATGTCAAACCTGTACATGTCTGTTTGTATGGCCGTTTCCCTCAGTGAAGTTGTACATCGGATCTGATACTGCGTGAGGGGCTCATTGTTGTTTATCCATAAGTAGGAACAGTAGTTCTTCCTGACCATGAAAAGTCCTGGGCCCATAAACAACTAAAGCAAACCTTTTAGAGTAACTGTGAAAGTAGTAGCACCAACGTCCTGTTTGTCCTGCATGAAGCACTTTAATGTTCCCCTTCTCTTAGTTTTCTGTTCCGCCATTTATTTCAAAGTGACTTTGATTAGCGCTTTAATCTGGATCATATGTATCCACACACTACATCCGATCATATTCCGGTATCAAATATACAAATGTTACCTGTAGATATGTTCATATTAATCAATGTCATCAAGTGTCATTATCAGACATATAAAAAATGTACATGATCTGAATCATATTAAGTTGATTAATGAAATAGCCTAATGATATCAAtgtaagggagggaggggggtattCACAAGACTGTGTCAAGGCCAATTTACCACCTGTTCTAAGAAATAGAAGtaatcaattacatttttttttattttttataacttGTTAATATCTGAGTATGAAACATGCACGTCTCTTTAATCATTTGGTGTGGGAGAAAGAATGGTGGTTAATTGACTGTTTCTAATGGTTTAATTAATAGCCCTTTACTACAGAAAGACAATGTCTGGAGTAGGCTTGGGTTGGTCAGACTGGTACAGCACATGTTATGTACATGAGAACATACGGTCAAAGGTATAATGTAGTCTAAAAAAGAATGACACTTGAATTAGATTGTTCTGGTGTTCTAAAGGTTGTCTCTGTAGGCGTTTATATATTTGTCTCTATTGCCATTACAGTCCACTGTTGTCCATGGTTACGGATGCCATTACTTGACTGAATAGATTTTGACAGACAGGTTCCAGTCATCCTGTACAACAAGCTGCATGATCAACTTATCTATGGTATTTGTCTATTATACACAGACACAAGTAGAAGACCAACGGGAGATGAGTGAGGGTTTGATATGCATGACAGACAACAGCACAGCTTCCTGGGTATTTAGAAGGGTCTGGTTAAGAGCACATTACTGAAGCACTGTTTGAAATGAATGCATTTTAATGGTGTCAAATTAGGATATTCTGAATACGCTGTACATACACTTTTTGCCAAATTAAAATGGTTGGTTTTATTAGA
>XM_036942162.1
ACATGCATCGGCAAAAGACGAGAACGCGCGCCCTGTGTCTTCTCTGCTTCCCTCTCGGATACTGTCGTTTCCTGCATTCTAGTTGATTGGCAAGTGGGGCCGGGACGACCACTGAGTAGCGAAATCCTGGTATAAGATGGAGGTTTGTGAGAGACTTTTGTGCCTGGCCGTGGTGTCCAGCGTTCTCTGCGTTGGCTCGGTTCTGGGGAAATACGTGAGAGGTATCGTCAATACCAAGGAGGACTGGCTGTTCCTTACTCGCTTCTGTTTTCTCACTGATTTTGGACGTCTGGACTTCCGGTTCCGCTACCAAAAGtCGCGATGCTGTCAGAATATATTGCTCTACTTTGATGACAGCTCTCAGTGGCCAGCTGTGTACAAGAAGCCAGACAAGGACTGCTACCAGAAGGAGGCGGTGTTGAGACCAGAGAATAACCAGGTTATCAACCTGACCACACGCTACACCTGGTCTGGCTGTGTGgtggaaggagagggagatgaggaggtgcTGAGTTGTGTGGGAGGTCGTAGTTTCCGCTCggtgagggagagatggtggtACATCGCTCTCAGCAAGTGTGGGGGGGAAGGTTTGCAGCTGGAGTATGAGATGAAGCTGACCAATGGCCAGTCTTTCTGGACACAGCATTTCTCTGCAGACGAGTTTGGGATCCTGGAAACTGACATCACGTTCCTGGTTATCTTCTCCCTGGTCTTCATCCTCTCATGTTATTTTGCCTATAATCTGAAAGGAAGGCAGCTTCTCCATACGACATATAAGATGTTTATGACTGCGGCTGGTGTAGAGGttGTTAGCCTTCTGTTCCACTGTATCTACTGGGGCCTGTATGCCAGAGATGGAGTGGGCAACGGCAGTCTCAAGATAATGGggaaaTTACTGTTCTCTGTCAGTTTCCTGGTGTTCCTGCTGATGCTGATCCTGCTGGGAAAAGGCTTCACTGTCACCAGGGCGAGGATCAGCCACAGTGGATCTGTCAAGCTGTCCATCTACATGACAGTCTACACCGTCACCTATATCATCCTCTTCATATACGAGGCAGAGttcTTTGACCCAGGTGAGGTGCTGTATGCATATGACAGCCCGGCGGGCTACGGTCTGATGGGTCTCCAGCTGCTGGCCTACGTGTGGTTCTGCTACGCCGTCCTGATCTCCCTCAAACACTACCCTGAGAAACAACCCTTCTACATCCCCTTCTTCACGGCATACACACTCTGGTTTTTCGCTGTGCCCGTCATGGCTCTGATAGCTAACTTTGGCATCCCTCGCTGGGCACGGGAGAAGATCGTCAACGGCATCCAACTGGGAATCCACCTCTATGCTCACATCGTATTCCTCGCTATCACTCGGCCCTCTGCGGCCAATAAGAACTTCCCGTACCACGTGCGGACCTCTCAGATCGGGATCCTACTCTCTAGTCCGAAGGCGGGTGTGGCGAGTGAGAGTTTCCCCCACCATGCCTATGGGAACAGCTCCTTCCTGGGCGACTCCCAGCCCAACTTCACAGAACTCTTCTCCATCCAGTCGGGCCCAGTGAAGACGGTGGAGGAGACGGTGGCCCGGAAGGGACAGGAAGTGCAGAGGAACACCTCCGTCCTTGACACATGATTTAAGGAGGGAAAGTTGTCCAGCGAGGATGTGaactaacttcacaatcaccccccccccccccccccccccccgactagTATGTAATGATGTCATGTCAAACCTGTACATGTCTGTTTGTATGGCCGTTTCCCTCAGTGAAGTTGTACATCGGATCTGATACTGCGTGAGGGGCTCATTGTTGTTTATCCATAAGTAGGAACAGTAGTTCTTCCTGACCATGAAAAGTCCTGGGCCCATAAACAACTAAAGCAAACCTTTTAGAGTAACTGTGAAAGTAGTAGCACCAACGTCCTGTTTGTCCTGCATGAAGCACTTTAATGTTCCCCTTCTCTTAGTTTTCTGTTCCGCCATTTATTTCAAAGTGACTTTGATTAGCGCTTTAATCTGGATCATATGTATCCACACACTACATCCGATCATATTCCGGTATCAAATATACAAATGTTACCTGTAGATATGTTCATATTAATCAATGTCATCAAGTGTCATTATCAGACATATAAAAAATGTACATGATCTGAATCATATTAAGTTGATTAATGAAATAGCCTAATGATATCAAtgtaagggagggaggggggtattCACAAGACTGTGTCAAGGCCAATTTACCACCTGTTCTAAGAAATAGAAGtaatcaattacatttttttttattttttataacttGTTAATATCTGAGTATGAAACATGCACGTCTCTTTAATCATTTGGTGTGGGAGAAAGAATGGTGGTTAATTGACTGTTTCTAATGGTTTAATTAATAGCCCTTTACTACAGAAAGACAATGTCTGGAGTAGGCTTGGGTTGGTCAGACTGGTACAGCACATGTTATGTACATGAGAACATACGGTCAAAGGTATAATGTAGTCTAAAAAAGAATGACACTTGAATTAGATTGTTCTGGTGTTCTAAAGGTTGTCTCTGTAGGCGTTTATATATTTGTCTCTATTGCCATTACAGTCCACTGTTGTCCATGGTTACGGATGCCATTACTTGACTGAATAGATTTTGACAGACAGGTTCCAGTCATCCTGTACAACAAGCTGCATGATCAACTTATCTATGGTATTTGTCTATTATACACAGACACAAGTAGAAGACCAACGGGAGATGAGTGAGGGTTTGATATGCATGACAGACAACAGCACAGCTTCCTGGGTATTTAGAAGGGTCTGGTTAAGAGCACATTACTGAAGCACTGTTTGAAATGAATGCATTTTAATGGTGTCAAATTAGGATATTCTGAATACGCTGTACATACACTTTTTGCCAAATTAAAATGGTTGGTTTTATTAGA

Function

NR:

description
PREDICTED: transmembrane protein 145-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0019236 response to pheromone biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036942152.1 False 4235 mRNA 0.45 15 22077990 22115281
XM_036942162.1 True 2930 mRNA 0.46 16 22077991 22115281

Neighbor

gene id symbol gene type direction distance location
LOC110537667 LOC106577399 coding upstream 8741 22030063 ~ 22069249 (+)
LOC110537828 LOC106605673 coding upstream 48574 22024418 ~ 22029416 (+)
arhgef1b arhgef1 coding upstream 53653 21967678 ~ 22024337 (+)
LOC118938391 LOC106605706 coding upstream 111133 21903363 ~ 21966857 (+)
LOC110537720 LOC106578847 coding upstream 224287 21849271 ~ 21853703 (+)
LOC110537821 trp-ii coding downstream 14815 22130096 ~ 22132085 (+)
LOC110537790 trp-ii coding downstream 33662 22148943 ~ 22150744 (+)
LOC110537812 tryp coding downstream 39479 22154760 ~ 22182084 (+)
LOC110537837 NA coding downstream 55698 22170979 ~ 22171985 (+)
bcl3 LOC106605697 coding downstream 88671 22203952 ~ 22229724 (+)
G122030 NA non-coding upstream 59175 22015130 ~ 22018815 (+)
G122026 NA non-coding upstream 90366 21986931 ~ 21987624 (+)
G122022 NA non-coding upstream 119249 21958327 ~ 21958741 (+)
G121991 NA non-coding upstream 178375 21899397 ~ 21899615 (+)
G122065 NA non-coding downstream 57431 22172712 ~ 22173051 (+)
G122135 LOC106605692 non-coding downstream 199164 22314445 ~ 22316058 (+)
G122225 NA non-coding downstream 258711 22373992 ~ 22374650 (+)
G122242 LOC106577531 non-coding downstream 296580 22411861 ~ 22412408 (+)
G122256 NA non-coding downstream 314529 22429810 ~ 22431364 (+)
LOC110537735 LOC106595974 other upstream 252896 21821165 ~ 21825285 (+)
G121677 NA other upstream 491889 21585421 ~ 21586101 (+)
LOC118938333 LOC106605563 other upstream 530956 21532987 ~ 21547038 (+)
LOC110509768 LOC106576258 other upstream 1062099 20990131 ~ 21058856 (+)
LOC110537939 apoc1 other downstream 227246 22342491 ~ 22346615 (+)
apoc4 NA other downstream 233302 22348543 ~ 22349936 (+)
G122459 LOC106578191 other downstream 695486 22810767 ~ 22811263 (+)
G123980 NA other downstream 1709412 23824693 ~ 23825502 (+)
LOC110538497 LOC106605627 other downstream 1746636 23861576 ~ 23881639 (+)

Expression


Co-expression Network