bcl3 (LOC106605697)


Basic Information

Item Value
gene id bcl3
gene name LOC106605697
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 22203952 ~ 22229724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624309.2
gaatgagagagagacagtttacGGACTATTTGATTCGTTGCAATAAAAGGAACATAATTGCCTACTGATTTTCTTCACTTGCCTACCTGCAGTTATATTGCAGGTGTGTTACCGTCAGTTAGGTTATTCGGTTAGTCTTATTTATCATATTCAAAACATTTACCACAATTCAGTTGTgtgatttaatttatttcaattatcAGTGTCCACAAATTctcaaaaggaacatttatggATTTGGAGAATAGCCTCGAGACATTCTTGTTTTGGCATGGCAAATTACATTATTAAACTCCAAATGCAAAACGACATTTGGATACTTTCGTGGAGAAGGAGACTGTGCCTAGGCTATAGAAGACATAAATTGAATTGGCATTTGAATCACTGCTATGTTTTGAGACGACAAACTCCTGAGGCTGATTCCAGGATACTTGATCCGTGTTCATGCCGAGGACCATGACCATGAACGGTCACCAGACTCAAACCACAGTGCCACTGGATTTGCGCACCACAAATAGGGAGTGTGGGAACGGTGCCGACGGGACTCCCACCAGCAAAGGTCGCTCCGTTCGGGCGAGAGTACCGTATCCCACTGCCCCACACACGGAGGATGACTGTCCAAACGGAAATGCCAGCCCGACGGTGGAGCCGCTGGCACATCGTTGTGGATCATCGTTGATAAAACCTCCTGTGAACACGGGAAACCCGGCAGTTCTGGAGAAAAAACACTCCCCAGTTGTAACTTATCACACGCCATTCACTCCGAACCCTGGTGAGCGCAGCACAACAGACACACGAACACGGGACATATCTTCCTCGAGGCTTCCTTTTAGGAAACGTCAATTTCCTACCGAATGGGAGACGCCGGAACAGCCACGTAACCCACCCGAGAGAGATGAGGGCTTATCCCCCTACAAAAACAAAGACTTGTGCAGCAGACCGAGTCCTCCAAATAATTTTTTAAAGAGCTACGACAATGAGAATATTGGTTCCCTGGCATCGGTCTCACACAGACAATTGTCCGTCGCCCGCGGTTTTGACAATGGACACCAAAGCGTCGATCCGGCTCGTTCAACGCAAGCACTCCGTCCTTACTgTCACCCAGATCCCTATCCAGGGTACCCATTCTACTCCTGGCCCAGCAGGTCACCGCTGGTTGTGAACGtgcctgtctctcccctccagtcctctctttaCCCGACGGGACATCCCGAACACCTGCTGGCAGATGTTGCCCAGGCGACGTGCCAAGACAACGACGGTGACACGGCTCTTCACATAGCAGTGGTGCAGGGGCAGGAAGCTCAGATCCAAAGAATGATCCTTCTCCTGGGACTGGTTCACACAGACCTGGACATCTATAACAACCTGAGACAGacCCCTCTTCATCTGGCTGTCATTACCCATCAGGCCCAGCTGGTGGGGGCGTTGCTGCGTGCGGGTGCTGATCCGGGGGCTCTGGACCGTAACGGTCAGACAGCGGTCCACCTCTGCTGTGAACACGGCCAGCAGGCCTGCCTCTCTGTGGTgctttcccacccctccatcttgACTTGCCTGGAGGTCAGGAACTATGAGGgcCTCACCCCTCTCCACCTAGCTGTACAGGGTGGAGACAAGGAGCTGGTCAGAATACTGCTGGATGCTGGGGCGGACATCAATGCTATGGACATCAAGAGTGGCCACAGTCCTCTCATACACGCAGTAGAGAACCACAATATGGACATGGTGCACTTCCTCATAGAGAATGACTGTAATGTGAATGGCCAGTCGTACAGTGGGAACACGGCCCTGCACAGTGCCTGTGGGCGAGGCCAGGTAGACACAGCCAGGCTGCTACTGAAGAACAGAGCCGACAGCAGTGTGAAGAACTACCACAATGACACCCCTGCGATGGTGGCCAAGAACAAGATGGTAACAGATGTACTACGAGGGAAGGGCTCCAGAAACCAGCAGCCCAAAGCTCAACAGTGTGTACCAGCCTCACCACACAGGAGCACACCCCACTCACAGAACAGAGGTTCCCCATCTCCCAGCCTAGGCCTTTCACCATTGGCCACTCCCACAGTTTCGCCTCTTCACCACAACGCATCCCATTCCCCCCGGGcacctcccactccctctcctcaCAGCCAATCAGCAGAGAGCCTGTCAGGCCGCCAGTCTCCAATGAAGATCCAGGAGAGCGAACAGCTGCCGGTGAGGCTTGACTCCGACAGGATGACTGCAGTGGACATCAGCATGACCCAGAGAAGGGCCTACAGCTACCCTCCAGCAATGCACCACCAGTCCCCCATCACTGATGCTCAAATAGGACATTTACTAGCCTACTACTCCCCTGGAGTCCAGAGACCTCTTTATCCAGAGCCTCCCTTTATCGTCCTCCACACCAACATCCCTTACCCAGCCACTGCCTCCCAAATGACCCCTGGCCAATCCCGGCCCTCCAGCGACCAATCAGATGTCTCCATCACGAGCGTCAGCATGGGCAAAGGTAACGGTTGACAAAGAGGTGCACTTTCAGTATCCCTgctgaattattggttggtgaccAGAAGGACTTGAGCTTAAAACAAAGAGGAACAGTTTATTTATTACTGTTGGACTATAGAGCTTATGCTGGTATGATTATGTTCCTCTAGCGCTCAGCTGGATGCATATGGATTTGTAAAGGGACTAATGCAATGAAACCTACACTGGAAGAATGAACGTTATCGCAGTTTCCTGAATAGACTGCATTCAGAACTGTtatcaccgtgtgtgtgtgtgtgatgggctGTGTGGAAACTGGAGCTCCTACCTTACTTGAAACTCATTATTTTTCAGGCTCACTGTTGTTTACTTTGAATAATTGATAAGTCCAAGAATAAATATTTTTCTATGCA

Function

NR:

description
B-cell lymphoma 3 protein homolog

GO: NA

KEGG:

id description
K09258 BCL3; B-cell CLL/lymphoma protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624309.2 True 2885 mRNA 0.51 9 22203952 22229724

Neighbor

gene id symbol gene type direction distance location
LOC110537812 tryp coding upstream 21868 22154760 ~ 22182084 (+)
LOC110537837 NA coding upstream 31967 22170979 ~ 22171985 (+)
LOC110537790 trp-ii coding upstream 53208 22148943 ~ 22150744 (+)
LOC110537821 trp-ii coding upstream 71867 22130096 ~ 22132085 (+)
LOC110537757 LOC106605699 coding upstream 88671 22077990 ~ 22115281 (+)
LOC118938435 NA coding downstream 23928 22253652 ~ 22302236 (+)
LOC110537912 LOC106605691 coding downstream 89378 22319102 ~ 22320715 (+)
LOC110537922 LOC106605689 coding downstream 102568 22332292 ~ 22336707 (+)
LOC110537939 apoc1 coding downstream 112767 22342491 ~ 22346615 (+)
apoc4 NA coding downstream 118819 22348543 ~ 22349936 (+)
G122065 NA non-coding upstream 30901 22172712 ~ 22173051 (+)
G122077 NA non-coding upstream 101670 22102015 ~ 22102282 (+)
arhgef1b arhgef1 non-coding upstream 179619 21967678 ~ 22024337 (+)
G122030 NA non-coding upstream 185137 22015130 ~ 22018815 (+)
G122026 NA non-coding upstream 216328 21986931 ~ 21987624 (+)
G122135 LOC106605692 non-coding downstream 84721 22314445 ~ 22316058 (+)
G122225 NA non-coding downstream 144268 22373992 ~ 22374650 (+)
G122242 LOC106577531 non-coding downstream 182137 22411861 ~ 22412408 (+)
G122256 NA non-coding downstream 200086 22429810 ~ 22431364 (+)
G122325 LOC106577561 non-coding downstream 344393 22574117 ~ 22578051 (+)
LOC110537735 LOC106595974 other upstream 378858 21821165 ~ 21825285 (+)
G121677 NA other upstream 617851 21585421 ~ 21586101 (+)
LOC118938333 LOC106605563 other upstream 656918 21532987 ~ 21547038 (+)
LOC110509768 LOC106576258 other upstream 1188061 20990131 ~ 21058856 (+)
G122459 LOC106578191 other downstream 581043 22810767 ~ 22811263 (+)
G123980 NA other downstream 1594969 23824693 ~ 23825502 (+)
LOC110538497 LOC106605627 other downstream 1632193 23861576 ~ 23881639 (+)

Expression


Co-expression Network