Gene
RNA
| Item | Value |
|---|---|
| gene id | bcam |
| gene name | LOC106577531 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 22399657 ~ 22499146 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| basal cell adhesion molecule-like |
| id | description |
|---|---|
| K06578 | LU, CD239; Lutheran blood group glycoprotein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036942438.1 | False | 2605 | mRNA | 0.53 | 17 | 22399657 | 22499146 |
| XM_036942444.1 | True | 2584 | mRNA | 0.53 | 16 | 22399657 | 22499146 |
22,380,000
22,390,000
22,400,000
22,410,000
22,420,000
22,430,000
22,440,000
22,450,000
22,460,000
22,470,000
22,480,000
22,490,000
22,500,000
22,510,000
22,520,000
22,530,000
22,540,000
22,550,000
22,560,000
22,570,000
22,580,000
NC_048566.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537898 | LOC106605692 | coding | downstream | 83589 | 22314451 ~ 22316068 (-) |
| LOC110537882 | LOC106577487 | coding | downstream | 146171 | 22236828 ~ 22253486 (-) |
| LOC110537877 | LOC106577478 | coding | downstream | 164733 | 22229800 ~ 22234924 (-) |
| LOC110537752 | LOC106577440 | coding | downstream | 200817 | 22180756 ~ 22198840 (-) |
| LOC110537803 | LOC106577461 | coding | downstream | 224304 | 22172692 ~ 22175353 (-) |
| rps19 | LOC100689943 | coding | upstream | 26038 | 22525184 ~ 22531056 (-) |
| cadm4 | LOC106577561 | coding | upstream | 51782 | 22550928 ~ 22749138 (-) |
| LOC110534479 | LOC106578237 | coding | upstream | 256206 | 22755352 ~ 22774315 (-) |
| si:ch211-79k12.2 | LOC106605590 | coding | upstream | 275362 | 22774508 ~ 22779710 (-) |
| LOC118938460 | LOC106605577 | coding | upstream | 280898 | 22780044 ~ 22791836 (-) |
| G123044 | NA | non-coding | downstream | 14861 | 22384146 ~ 22384796 (-) |
| G122967 | apoa2 | non-coding | downstream | 43585 | 22354585 ~ 22356072 (-) |
| G122973 | NA | non-coding | downstream | 53029 | 22342611 ~ 22346628 (-) |
| G122891 | NA | non-coding | downstream | 219258 | 22179991 ~ 22180399 (-) |
| G123149 | NA | non-coding | upstream | 111604 | 22610750 ~ 22624269 (-) |
| G123150 | NA | non-coding | upstream | 112880 | 22612026 ~ 22616872 (-) |
| G123158 | NA | non-coding | upstream | 136896 | 22636042 ~ 22660713 (-) |
| G123247 | NA | non-coding | upstream | 267107 | 22766253 ~ 22767773 (-) |
| G122972 | NA | other | downstream | 21497 | 22376153 ~ 22378160 (-) |
| LOC110537842 | NA | other | downstream | 242123 | 22120579 ~ 22157534 (-) |
| G122829 | LOC106605673 | other | downstream | 371940 | 22026299 ~ 22027717 (-) |
| G122761 | LOC106578847 | other | downstream | 543756 | 21851433 ~ 21856413 (-) |
| G122733 | LOC106592382 | other | downstream | 587225 | 21796507 ~ 21812432 (-) |
| G123308 | NA | other | upstream | 505840 | 23004986 ~ 23005812 (-) |
| G123435 | NA | other | upstream | 686494 | 23185640 ~ 23199252 (-) |
| LOC110538355 | LOC106577931 | other | upstream | 781033 | 23279116 ~ 23281851 (-) |
| G124840 | NA | other | upstream | 1404693 | 23903839 ~ 23904677 (-) |
| LOC110538705 | LOC106577653 | other | upstream | 1660021 | 24144519 ~ 24172836 (-) |
