Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110538076 |
| gene name | LOC106578103 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 22864942 ~ 22882936 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110538076 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036942632.1 | False | 7927 | mRNA | 0.44 | 5 | 22864942 | 22882607 |
| XM_036942637.1 | False | 7914 | mRNA | 0.44 | 5 | 22864942 | 22882607 |
| XM_021624653.2 | False | 7850 | mRNA | 0.44 | 5 | 22864942 | 22882631 |
| XM_036942633.1 | False | 7837 | mRNA | 0.44 | 5 | 22864942 | 22882631 |
| XM_036942634.1 | False | 7704 | mRNA | 0.44 | 4 | 22864942 | 22882631 |
| XM_036942636.1 | False | 7837 | mRNA | 0.44 | 5 | 22864942 | 22882631 |
| XM_036942635.1 | False | 7984 | mRNA | 0.44 | 5 | 22864942 | 22882923 |
| XM_036942630.1 | True | 8010 | mRNA | 0.44 | 5 | 22864942 | 22882936 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534486 | NA | coding | downstream | 11096 | 22853130 ~ 22853846 (-) |
| LOC118936533 | LOC106605595 | coding | downstream | 14092 | 22847803 ~ 22850850 (-) |
| LOC118938551 | LOC106605594 | coding | downstream | 19461 | 22839988 ~ 22845481 (-) |
| LOC110538050 | LOC106605593 | coding | downstream | 26434 | 22822697 ~ 22838508 (-) |
| LOC110538006 | LOC106605591 | coding | downstream | 51807 | 22803447 ~ 22813135 (-) |
| im:7147486 | LOC106605599 | coding | upstream | 1042 | 22883978 ~ 22899520 (-) |
| LOC110538037 | LOC106605599 | coding | upstream | 24150 | 22907086 ~ 22949770 (-) |
| si:dkeyp-84f3.5 | LOC106605600 | coding | upstream | 70645 | 22953581 ~ 22965449 (-) |
| LOC110538268 | LOC106605601 | coding | upstream | 85115 | 22968051 ~ 22971540 (-) |
| LOC110538089 | LOC106605603 | coding | upstream | 236446 | 23119382 ~ 23129010 (-) |
| G123277 | LOC106605579 | non-coding | downstream | 1688 | 22860225 ~ 22863254 (-) |
| G123242 | NA | non-coding | downstream | 9811 | 22854889 ~ 22855131 (-) |
| G123240 | NA | non-coding | downstream | 18479 | 22845750 ~ 22846463 (-) |
| G123234 | NA | non-coding | downstream | 25406 | 22838771 ~ 22839536 (-) |
| G123283 | NA | non-coding | upstream | 6796 | 22889732 ~ 22889979 (-) |
| G123296 | NA | non-coding | upstream | 35392 | 22918328 ~ 22918547 (-) |
| G123299 | NA | non-coding | upstream | 40258 | 22923194 ~ 22923601 (-) |
| G123300 | NA | non-coding | upstream | 40890 | 22923826 ~ 22924025 (-) |
| G123310 | NA | non-coding | upstream | 48000 | 22930936 ~ 22931634 (-) |
| G122972 | NA | other | downstream | 486782 | 22376153 ~ 22378160 (-) |
| LOC110537842 | NA | other | downstream | 707408 | 22120579 ~ 22157534 (-) |
| G122829 | LOC106605673 | other | downstream | 837225 | 22026299 ~ 22027717 (-) |
| G122761 | LOC106578847 | other | downstream | 1009041 | 21851433 ~ 21856413 (-) |
| G122733 | LOC106592382 | other | downstream | 1052510 | 21796507 ~ 21812432 (-) |
| G123308 | NA | other | upstream | 122050 | 23004986 ~ 23005812 (-) |
| G123435 | NA | other | upstream | 302704 | 23185640 ~ 23199252 (-) |
| LOC110538355 | LOC106577931 | other | upstream | 397243 | 23279116 ~ 23281851 (-) |
| G124840 | NA | other | upstream | 1020903 | 23903839 ~ 23904677 (-) |
| LOC110538705 | LOC106577653 | other | upstream | 1276231 | 24144519 ~ 24172836 (-) |
