si:dkeyp-84f3.5 (LOC106605600)


Basic Information

Item Value
gene id si:dkeyp-84f3.5
gene name LOC106605600
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 22953581 ~ 22965449 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624811.2
TATTTGTTTGCGAACGTCCATAAtaccgaagaagaagaagaatggcTGATGGTCTCCGCCCCTTTCTCCTCCGGATTCTTGTAATTACTATGTAGAAAAAATGGGAAGAACTAGCGGGGAACCGGTGGATACAACACGATTCGCAATGTAACATAAGTGGAGCGATATAACGAATGGGCAGAGAACGTCTATACTAATCGGACTTTAGAAATGTGTTCTGACCAGACAAAGGAAGAGTTCTACAAAACAAGGTGCTCATGAAGAATGGAACTAACCATGTTTAACTTTGATCATTGAACACACCCTAATGGATTACGTAAGCTCCGCTGAACCAGATGTTGATGCCTTCATCTGCACAGAATGTGGGGATGGCTTCAGGCGCTACCTCGACTTGGTTAAACACATTACTGTTCATGAACGACTCAGGACTCATGAACAAACAGATTCGTTTTCCCTTGACAGTTTACCCAATGGGTTTCAAGTTCCCCGTGAATATGCTCTCCATGAAAACGGAACTTTCATAGTGGTTGACAGATCTGGACCATCAAACAACCCATCTTCAACTCTTTCACCTTATCAGAATTCAAAGACCATTGTACTCAAAACTAAGCCAGCAAAAACTGATCTACGTGTCAACACAGTGTCTCACTCCCAGTGCCGCAGTGTCTCTCCTCTAAAACAGTACCGATGCGAAACATGTGGAAAATTGTTTAACAACCAGCTGAGTTTACAACGACATCAACAGTATCGTAATTTAGAGCAAGGTTATAAGTGCACCTTGTGTTGCAAGATCTTCACAGATAAAGAGAGGCTAAGGGAACATCTCCAAGAACATGCCCATGAAATATTTTACTGCTGTGGTCAGTGTGGAAAACGCTTTCTGAAACAAGAGACCCTGTATGCTCATCAAAAAGAGCAGCATGGATCGCTGGGGCTCAAACAAATGGGGAAGTCAGACAATGGTCAAGAGAACATAATACAGAAAACATATCCCTGTAAGAAGTGTAATCTGTGTTTTTTCTGGCTCTCCGACTTGCAGAGCCACTTACTGAGTCATTCCAAAGACAAACCATTATCTGTGAACTCTTCATCCAAAATCGAGCAACAGTCTCAGAAAGATGAGCTATCACATACCATCGAGTACAGTGACGGCACCCCTACAGATGTGACTAAACAGTACAGCAGCGGCACCCCTACTACCGATGTGACCAAACAGTATAGCAGTGACGCAACTGTTGATGTGAAGACCCACAATGGCAAATCTGATTCCAAAACACCATCCTCTTTCAGACCATACCGCTGTGGTTTGTGTGGAGATCGCTTCCAACAGTTAACAGACTTGAAGGAGCATCATCTTACCCATCAGACACAAGAAGAAATTGACAAGTTAAATAAGGATTCAGAGTCACAAAGAGTTGTAAAAAGGCGGCGAAGGTATACTGGCATTGAGTGCATCGTAACAAAAGCACCTGCAAGGAAGGGAGGAAGGCCCCCACTTTATAAAAAAGGCTCTGGGACAAAATTACATCCATGCAAGCACTGCCACCGTGTATTCAGTCACTCTAGTAGTCTTTCTCGGCACAATAGATCCCACAAGGGGACTCTTCACACTTGTGTTCTCTGTGGGAAACATTTTCCACAACGCTGTGATGTCCGGAGGCATATAGCCATGTATCACAAACCTGAATTGGAGAAGAAGCCAAGTCTTAAGTACTTGGCATTGCATTCTAAACCAGATGGTGGTTCCCAATTGAATTCTGATGTGTTGGAACAGAATGCGTCATCTGAAGGAAAACCCAAGAAATCTTTAGACGGTGTTGTAACAGAATTGGACAGTGACAATGGTGACGATCAACAAACCACATCTACTGGAGAAGTGTTCGCTGCTCCTAAGGCACGGAGGAACTACAAGTGTGACCAATGTGGGAAAAAGTTTGGGCTGCTGTGTGTGTACCAACGGCATTTGCGGTACCACAAAAGGGAACCGGGTAGTGAAATGGTTAAGTGCCCTCGCTGCCCAAGTCGCTTCCGGAGTTCTTCTGCTCTAGGGCGCCATCTTGAGATTCACCCAAGTCAGTCAAGCGGGGAAACGGACATGGAAGGACGGGTATCCCCCACTGCTGACTCCAATccagacctggactctgaccaAGACAATGCAAAGGATTTAGTCGGTCATGGGGACATTGACGATGGCAAGGGTGGGAATGGTGAAAACATTGGTCCAGCAGAGGTGCTGTATGAATGCACTGAGTGTACAGAGACCTTTTCTTCCTTGCAGAAGTTTCTGAAGCACCAGAGTTCTCATGGGTCCGATAACCTTGGATAATGGAAACTATATGCATGGTATTTATATCCTGAGGTCTGAACCCTAACTTGAGATCGATGCACATACCACAAATTGTTGCACTGTTATGCAGACCTCAATTCATGATTTACGGAAGTCCGAGTTACTTGCACATGTCTCAAGTTAGGATTGTTTCCTTGATGATGGAGCAGTTAACAAGTGTTTTATGCTATGAATTGAGGAACTACAACCAGTATGGTTCTTGTGGTGGGTGGGTCATTAATTCTGAACTTTGATGTAGCACTGCATAGATCAAGATGGTGACTGGGAATTACTgaaatttttaaaatgtattttctacGATCATGTGAATTTGAGGTCTGTTTTGTATCAATGTTTTAGATGGTTTTGGTTACTTCCAGTTAAACCTTTGACATTACCCCTGGAAAGGCCATGGTGTGGGAATAATGCCTTAATATGCTCTGAGAGCATTATTGAAGCTAGTAGTCGAGCACAATTTGCTAAAGACCAAGTGGAAATAACATTTTTGCAGATAGATTTGGACCCATGCAAAGCGTTAAGATGGTCTGAGGTAACAATGACTGTCCATTTTGTAAAGTAATTAGAAATGTTTTTTTGCAAGTGCAATTCCATTGGGATTTTGCTTTAAAACAATTTAAGATGTTATTTATTTGCATTTGCCAAGTCTTTACAACCATGGTGTCTTTCTCAAGATCAAAAAAACCTGTCAAGGTCAGATGTTCCCAAACTACCAGACCAGgaatgtttatcattttgaaAGGCTTTCTCATGTATCATATTTTCACTATATTGTGTTCTTGTCTATCAATTCACTTAATGGTTCTGTTATCTAGATTAGTGGTTCCCAATGAGGTACTtcacagggggtacttgagatgactcatgagaccataggtaggtctactggtaaaatgcacatgggggggtacttcaggggttgtctgggcagagcaaaattcagttggtggtacagtaaccgaaaaagattgggaaccactgctctagatgTTTTCTGCTGCCAGTCCTCCGGGTGGCCACTGATCTGTTCACATGATCAGCATGTTTTTCCATAAGGCACGACAAAGTCCAGTGATTCCAATGCAAGCCACACGTAGCATTGTGATGtaaattaacattttcaaatggTACTGTTGCTTCCTTTATTGCCTACCAAACGAGAACACATGCATTGGCCCTGATTTTATGTTAATTTTGTGCCATTAAAGTTGAAAGAAATTTA

Function

NR:

description
zinc finger protein 271-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624811.2 True 3569 mRNA 0.43 2 22953581 22965449

Neighbor

gene id symbol gene type direction distance location
LOC110538037 LOC106605599 coding downstream 3811 22907086 ~ 22949770 (-)
im:7147486 LOC106605599 coding downstream 54061 22883978 ~ 22899520 (-)
LOC110538076 LOC106578103 coding downstream 70645 22864942 ~ 22882936 (-)
LOC110534486 NA coding downstream 99735 22853130 ~ 22853846 (-)
LOC118936533 LOC106605595 coding downstream 102731 22847803 ~ 22850850 (-)
LOC110538268 LOC106605601 coding upstream 2602 22968051 ~ 22971540 (-)
LOC110538089 LOC106605603 coding upstream 153933 23119382 ~ 23129010 (-)
LOC110538224 LOC106605608 coding upstream 211011 23176460 ~ 23200956 (-)
LOC110538290 LOC106605611 coding upstream 259040 23224489 ~ 23233768 (-)
LOC110538325 lin37 coding upstream 297014 23262463 ~ 23267059 (-)
G123310 NA non-coding downstream 21947 22930936 ~ 22931634 (-)
G123300 NA non-coding downstream 29556 22923826 ~ 22924025 (-)
G123299 NA non-coding downstream 29980 22923194 ~ 22923601 (-)
G123296 NA non-coding downstream 35034 22918328 ~ 22918547 (-)
G123283 NA non-coding downstream 63602 22889732 ~ 22889979 (-)
G123337 NA non-coding upstream 16893 22982342 ~ 22982609 (-)
G123346 NA non-coding upstream 27613 22993062 ~ 22993274 (-)
G123348 has1 non-coding upstream 29530 22994979 ~ 22995225 (-)
G123306 LOC100194703 non-coding upstream 36757 23002206 ~ 23003912 (-)
G123307 NA non-coding upstream 40390 23005839 ~ 23006807 (-)
G122972 NA other downstream 575421 22376153 ~ 22378160 (-)
LOC110537842 NA other downstream 796047 22120579 ~ 22157534 (-)
G122829 LOC106605673 other downstream 925864 22026299 ~ 22027717 (-)
G122761 LOC106578847 other downstream 1097680 21851433 ~ 21856413 (-)
G122733 LOC106592382 other downstream 1141149 21796507 ~ 21812432 (-)
G123308 NA other upstream 39537 23004986 ~ 23005812 (-)
G123435 NA other upstream 220191 23185640 ~ 23199252 (-)
LOC110538355 LOC106577931 other upstream 314730 23279116 ~ 23281851 (-)
G124840 NA other upstream 938390 23903839 ~ 23904677 (-)
LOC110538705 LOC106577653 other upstream 1193718 24144519 ~ 24172836 (-)

Expression


Co-expression Network