hspb6 (hspb6l)


Basic Information

Item Value
gene id hspb6
gene name hspb6l
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 23276038 ~ 23278785 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021625104.2
ACTCTACGTCTCAAACGGGATTTTACACGGTGACCCTTCCCAGCAACAATTTGAAAGGTCTTTGAGGTTCAAGCGTATTCGGTATTATTTACAATATTCCAGATTTGACAAGGACTATAAAAACCATCGCTGTAGTCTTTACGAATCAATCACTTTCTGAACCTCCGCAGTGAAGGGGATATATTATAGTTGAATTATTTCTTGCTTCATTCTAACAACTTCTATTAGGCTAATAGTTTCTCGAATCGTCCAATAAATACGCGAAATGGACTTCGATCTGCCACCCACTTTTCCAGCCAGCGGTATCGCATGGGAGAGGGTCCTGCCGCCTCTTCTTCCCGGGCTGAACGGGACATTCGGGCTGTACTCATTCACGCCGTCGGAGCTGCTCACCCCAGTGACGGAGCAAACTGGCTCTGCACAGGTGTGTTGTGACCACAGTCGATTCACAGTTCAGGTTGATGTGAAACACTTCAACCCAGAGGAGCTGATGGTCAAGGTGACAGGAGACTTTGTGGAGGTCCAAGGGAAACACAAAGAGAAAAAAGATGGGTCGGGGCTGGTGACGCGACAGTTTAACCGGCGCTACAGGATTCCAGAGGGAGTGGACTCCATGGCTCTGGAGTCGGCTGTGTCGCCTGAAGGCATCCTCATCATATCGGCCCCTATGCTGCAGGGGGAGAACTCCAGACACCTGCCCCACTCAGAATCATGAGCATACACACCATAAGAACAAACACACAATCCATAGGAACCAGTGTTGTGGGGGTAGTAGtaaactacatgtagttcaactagtaatttaactacattttgcagtagcttggtggcaGTTCATATCTGGTAGTTTGCtacacagcaaaaaaaaaagtagttaactactggaactacacactacttctTTTGCAAATTGAAAACATGGGTGAAGTAGGCAATCATTTCCTTTTTCAGTATTACCCCTTTCTAATTCTCATTTGAAACAGTTGTTTAATATGCTAAATTACACTTTCTGTTAACATCTTACTACagagtgatctgttcttgcaatttgtagtctgaCATTTATAATTTAAAATAGTTTATCGCAAAGAAGTTTGCAATTTTTCAAATTAACTTTagttaaagaaaataaaaaagtagTTATGGGTatcttaacttcttccagtgtgaagtaattggtaacTTGGTAAACTGTACACACACCAAATAAGGATAGAAGCAAAAATACAGGCACGCTCTCCTCCAACAGACATATCAAACACTCACCAAGGAGCTGGTGCCTGCCTGTACCAAAACACCCATTAACTAAGCTGTCACAGCATTAAAATTAGGTTTGTACATATTAACAGGACAGATCTCTCATTTAAAAGCATCCCTCATCCTAAAGAATCCCATTTAACTCATCAATCTTAATATTTTTATGGAACCATTTATTGTAAATATGATATAAAACCATTGAAAATGTTGATTTGATTGTGTGGCGTGTCTAATGCCCTCTAAATCATGTGTAAAGGTTAACAATCAGATTATCAAGAATGTTCACAAAACCCAACTGTAAGGTTGTTGTATATTTAACTATTCATTGTAAAAAGAGAATTTGTTAACAAAAATAAATGCACTATATTTcggtacaaaaataaaaatgctgTTGAATTGA
>XM_021625096.2
GGCAGTGTTGAATGTCAATTGCCAAATCACCAGAAGGGGCTCCCAATAGGTGTCAAGGAAAACGACCATGTAAGCTTAATTAAAAAGGTGCACTATCACACGTACACTATATGATTATAATGGAGAATATAGTAACAGTTCTTCATATTTAGGTTGATATGATAGGGAGGAGTGTTCCTTAAGGCAGGTCCCCACGCTATCGAAGCATTTGATCACAACTAAAATAAAATCATTATTCCCAGGGGGTCTGGTGGTGAATCCAAAGCAAGCAGGGTGCCCCACAGCGAAGTTCCCGCCTCATTATCTAACTCCTGCTATCATAAATACAGACCGTAACTGGCACTTCCACAGTTTGTCAGGGAAAAGGGCAGTCAGATACACGGACGCAGCAATCCATCCTATTGGCAGTCAGAACATAATAGGACTTGCAGGCATCTCATAACGACGCGAAATGGACTTCGATCTGCCACCCACTTTTCCAGCCAGCGGTATCGCATGGGAGAGGGTCCTGCCGCCTCTTCTTCCCGGGCTGAACGGGACATTCGGGCTGTACTCATTCACGCCGTCGGAGCTGCTCACCCCAGTGACGGAGCAAACTGGCTCTGCACAGGTGTGTTGTGACCACAGTCGATTCACAGTTCAGGTTGATGTGAAACACTTCAACCCAGAGGAGCTGATGGTCAAGGTGACAGGAGACTTTGTGGAGGTCCAAGGGAAACACAAAGAGAAAAAAGATGGGTCGGGGCTGGTGACGCGACAGTTTAACCGGCGCTACAGGATTCCAGAGGGAGTGGACTCCATGGCTCTGGAGTCGGCTGTGTCGCCTGAAGGCATCCTCATCATATCGGCCCCTATGCTGCAGGGGGAGAACTCCAGACACCTGCCCCACTCAGAATCATGAGCATACACACCATAAGAACAAACACACAATCCATAGGAACCAGTGTTGTGGGGGTAGTAGtaaactacatgtagttcaactagtaatttaactacattttgcagtagcttggtggcaGTTCATATCTGGTAGTTTGCtacacagcaaaaaaaaaagtagttaactactggaactacacactacttctTTTGCAAATTGAAAACATGGGTGAAGTAGGCAATCATTTCCTTTTTCAGTATTACCCCTTTCTAATTCTCATTTGAAACAGTTGTTTAATATGCTAAATTACACTTTCTGTTAACATCTTACTACagagtgatctgttcttgcaatttgtagtctgaCATTTATAATTTAAAATAGTTTATCGCAAAGAAGTTTGCAATTTTTCAAATTAACTTTagttaaagaaaataaaaaagtagTTATGGGTatcttaacttcttccagtgtgaagtaattggtaacTTGGTAAACTGTACACACACCAAATAAGGATAGAAGCAAAAATACAGGCACGCTCTCCTCCAACAGACATATCAAACACTCACCAAGGAGCTGGTGCCTGCCTGTACCAAAACACCCATTAACTAAGCTGTCACAGCATTAAAATTAGGTTTGTACATATTAACAGGACAGATCTCTCATTTAAAAGCATCCCTCATCCTAAAGAATCCCATTTAACTCATCAATCTTAATATTTTTATGGAACCATTTATTGTAAATATGATATAAAACCATTGAAAATGTTGATTTGATTGTGTGGCGTGTCTAATGCCCTCTAAATCATGTGTAAAGGTTAACAATCAGATTATCAAGAATGTTCACAAAACCCAACTGTAAGGTTGTTGTATATTTAACTATTCATTGTAAAAAGAGAATTTGTTAACAAAAATAAATGCACTATATTTcggtacaaaaataaaaatgctgTTGAATTGA

Function

NR:

description
alpha-crystallin B chain-like

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021625104.2 False 1657 mRNA 0.40 4 23276038 23278328
XM_021625096.2 True 1843 mRNA 0.41 4 23276038 23278785

Neighbor

gene id symbol gene type direction distance location
LOC110538325 lin37 coding downstream 8979 23262463 ~ 23267059 (-)
LOC110538290 LOC106605611 coding downstream 42270 23224489 ~ 23233768 (-)
LOC110538224 LOC106605608 coding downstream 75082 23176460 ~ 23200956 (-)
LOC110538089 LOC106605603 coding downstream 147028 23119382 ~ 23129010 (-)
LOC110538268 LOC106605601 coding downstream 304498 22968051 ~ 22971540 (-)
LOC110538355 LOC106577931 coding upstream 331 23279116 ~ 23281851 (-)
igflr1 tm149 coding upstream 96094 23374879 ~ 23379768 (-)
LOC110538238 LOC106605616 coding upstream 114884 23393669 ~ 23405426 (-)
LOC110538371 NA coding upstream 141514 23420299 ~ 23445208 (-)
LOC110538151 LOC106577862 coding upstream 177955 23456740 ~ 23520468 (-)
G123656 NA non-coding downstream 20784 23252782 ~ 23255254 (-)
G123660 NA non-coding downstream 23372 23252405 ~ 23252666 (-)
G123647 LOC106605609 non-coding downstream 39149 23236354 ~ 23236889 (-)
G123429 NA non-coding downstream 104996 23170798 ~ 23171042 (-)
G123821 NA non-coding upstream 275414 23554199 ~ 23554769 (-)
G123822 NA non-coding upstream 276207 23554992 ~ 23555203 (-)
G123859 NA non-coding upstream 345917 23624702 ~ 23624901 (-)
G123863 NA non-coding upstream 347959 23626744 ~ 23627011 (-)
G123882 NA non-coding upstream 372517 23651302 ~ 23651533 (-)
G123435 NA other downstream 76786 23185640 ~ 23199252 (-)
G123308 NA other downstream 270226 23004986 ~ 23005812 (-)
G122972 NA other downstream 897878 22376153 ~ 22378160 (-)
LOC110537842 NA other downstream 1118504 22120579 ~ 22157534 (-)
G122829 LOC106605673 other downstream 1248321 22026299 ~ 22027717 (-)
G124840 NA other upstream 625054 23903839 ~ 23904677 (-)
LOC110538705 LOC106577653 other upstream 880382 24144519 ~ 24172836 (-)
G125003 NA other upstream 990441 24269226 ~ 24270136 (-)
G125043 NA other upstream 1045795 24324580 ~ 24324836 (-)

Expression


Co-expression Network