Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110534504 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 23391260 ~ 23391711 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| G protein-activated inward rectifier potassium channel 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110534504 | True | 452 | mRNA | 0.58 | 1 | 23391260 | 23391711 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944131 | LOC106605615 | coding | upstream | 25831 | 23360583 ~ 23365429 (+) |
| LOC110538034 | kmt2b | coding | upstream | 47368 | 23282564 ~ 23343892 (+) |
| LOC110534494 | LOC106577938 | coding | upstream | 115168 | 23267159 ~ 23277132 (+) |
| LOC110538320 | LOC106605612 | coding | upstream | 129398 | 23261103 ~ 23261862 (+) |
| LOC110538364 | ctrl | coding | upstream | 136003 | 23252834 ~ 23255257 (+) |
| LOC110538396 | NA | coding | downstream | 35558 | 23427269 ~ 23429493 (+) |
| zmp:0000001114 | LOC106605621 | coding | downstream | 129179 | 23520890 ~ 23552337 (+) |
| nphs1 | LOC106605624 | coding | downstream | 307308 | 23699019 ~ 23759218 (+) |
| LOC110538452 | fxyd5b | coding | downstream | 380876 | 23772587 ~ 23795850 (+) |
| LOC110538480 | NA | coding | downstream | 446126 | 23837837 ~ 23849316 (+) |
| G123518 | NA | non-coding | upstream | 449 | 23377609 ~ 23390811 (+) |
| G123508 | NA | non-coding | upstream | 23303 | 23367496 ~ 23367957 (+) |
| G123507 | NA | non-coding | upstream | 24243 | 23366773 ~ 23367017 (+) |
| G123464 | LOC106577931 | non-coding | upstream | 109790 | 23280139 ~ 23281470 (+) |
| G123528 | LOC106605616 | non-coding | downstream | 1889 | 23393600 ~ 23395702 (+) |
| G123515 | NA | non-coding | downstream | 44442 | 23436153 ~ 23460205 (+) |
| G123558 | NA | non-coding | downstream | 57326 | 23449037 ~ 23461548 (+) |
| G123578 | LOC106605617 | non-coding | downstream | 91645 | 23483356 ~ 23520453 (+) |
| G123616 | LOC106605622 | non-coding | downstream | 170376 | 23562087 ~ 23564462 (+) |
| G122459 | LOC106578191 | other | upstream | 579997 | 22810767 ~ 22811263 (+) |
| apoc4 | NA | other | upstream | 1041324 | 22348543 ~ 22349936 (+) |
| LOC110537939 | apoc1 | other | upstream | 1044645 | 22342491 ~ 22346615 (+) |
| G122030 | NA | other | upstream | 1372445 | 22015130 ~ 22018815 (+) |
| LOC110537735 | LOC106595974 | other | upstream | 1566166 | 21821165 ~ 21825285 (+) |
| G123980 | NA | other | downstream | 432982 | 23824693 ~ 23825502 (+) |
| LOC110538497 | LOC106605627 | other | downstream | 470206 | 23861576 ~ 23881639 (+) |
| G124121 | LOC106605585 | other | downstream | 755150 | 24146861 ~ 24148593 (+) |
| LOC110538915 | LOC106605649 | other | downstream | 1149293 | 24540963 ~ 24544247 (+) |
| G124451 | LOC106578403 | other | downstream | 1481340 | 24873051 ~ 24873834 (+) |
