LOC110538629 (LOC106605631)


Basic Information

Item Value
gene id LOC110538629
gene name LOC106605631
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 24001565 ~ 24015944 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021625568.2
CACCCACACAGGCCTCCTCTAAACATAATGAGCTGCCAGGGACggacaggggagggggagagagaacgtAATTGCTTGCTTTACACAGCttgtaggcaggcagacagtttaggcagagagacacagaagaacgcttggagagattgagaggaggcacaaaataaaaaaaagagagaagtaAGATAAAAGGGAAACAAATCACCAACAGCAAAAAAATGGATCCCAACAAGATGCCAAACGCCCCACCACCAGGCTGGAACCCAGATGAGAAGTCTGGGATGGGACAACCAGCTCCTCCACCCTACCAGGACCACCCCCAGTACCCCAACACAGGATACCCTGTACCAGCAGGCTACCCCGCCAATCCCCAGGGATACGCACCACCGCCCCAGTATGGAGGAGCTCCTGGGGCCCCTTACGGCCAGCCATACCCCCAGGGAGAGTACCCCCAGTCCACCGTCACAGTCCAGCCTACGGTGTTTGTGACCCGTGGAGCTCTGCCTTACCCTCTGCCAGACTACCTGGGCTACTCCATTTTCACCATGCTGTGCTGCTGCCTGCCACTTGGCATCGCTGCACTTATCTACTCCATCTCGACTCGAGACGCCAACAACCAGGGTCAGCAGCAGGTTGCTGAGAGGAGTTCTCGTCTAGCACGGATACTGAACCACTCCGCCCTGGGTATCGGCATCACCGTCATCATCCTGTACATCGTCTACGTCGTCATCCTGGCCAAAAATATCCACTGATCTGACACATAAACACCGGCTAGCACCACAGCCACCGCTTCTCTCAACCCCAGCCCCCAAAATCATCCTGATCTTGACCACATACAGTAGGTGCCAGTTACAGGCACTTTCCAAAGAGATACATAATGCTGTTTATTCATCAATGCTTTTTTTAAAACTATATATCTAATGACTTGCTTTTTTAAATACCTGCAGACAGGATAGTTTAAATTGTTAATTCATTTGTCTGTTTAATTTGAATTTTAATATACATAAATAAACAACAAATTATGGATACTGATAGTTTTTTGGACTATGTCTAATAAATGTCTAAAGGATAGTGTATGTGTATTCACTGTGTATGGATAAGTCATATCAGAGTTTAGAGACACATTTGACAATGTTATGAGAATGCATCAGAAAGAGACTATTCTTAAAGTCTGAGAGGACATGTATTACTTGATGTCAATACACAAAGGGCCAGTAAGGTTAACACTCACATGAATAAACATTTTGCAACTCAAT

Function

NR:

description
transmembrane protein 91-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021625568.2 True 1253 mRNA 0.47 2 24001565 24015944

Neighbor

gene id symbol gene type direction distance location
LOC110538573 fxyd9b coding upstream 4203 23984319 ~ 23997362 (+)
LOC110538617 NA coding upstream 26607 23970410 ~ 23974958 (+)
LOC110538566 LOC106605629 coding upstream 32251 23946773 ~ 23969314 (+)
LOC110538544 LOC106605665 coding upstream 64531 23924568 ~ 23937034 (+)
LOC110538531 NA coding upstream 114852 23882624 ~ 23887290 (+)
LOC100136301 LOC106605632 coding downstream 25737 24041681 ~ 24054664 (+)
LOC100135863 LOC106577739 coding downstream 53425 24069369 ~ 24076225 (+)
tmem147 LOC106605633 coding downstream 61731 24077675 ~ 24081015 (+)
LOC110538661 LOC106605634 coding downstream 90700 24106644 ~ 24124814 (+)
LOC110538727 LOC106605639 coding downstream 174946 24190890 ~ 24200234 (+)
G124069 NA non-coding upstream 10731 23988981 ~ 23990834 (+)
G124049 NA non-coding upstream 17505 23980826 ~ 23984060 (+)
G124024 NA non-coding upstream 98427 23902903 ~ 23903138 (+)
G124023 NA non-coding upstream 100012 23901270 ~ 23901553 (+)
G124017 NA non-coding upstream 109478 23891853 ~ 23892087 (+)
G124079 NA non-coding downstream 9860 24025804 ~ 24026089 (+)
G124080 NA non-coding downstream 11493 24027437 ~ 24027655 (+)
G124087 NA non-coding downstream 39879 24055823 ~ 24056120 (+)
G124113 NA non-coding downstream 99503 24115447 ~ 24115658 (+)
G124115 NA non-coding downstream 101288 24117232 ~ 24117456 (+)
LOC110538497 LOC106605627 other upstream 119929 23861576 ~ 23881639 (+)
G123980 NA other upstream 176063 23824693 ~ 23825502 (+)
G122459 LOC106578191 other upstream 1190302 22810767 ~ 22811263 (+)
apoc4 NA other upstream 1651629 22348543 ~ 22349936 (+)
LOC110537939 apoc1 other upstream 1654950 22342491 ~ 22346615 (+)
G124121 LOC106605585 other downstream 130917 24146861 ~ 24148593 (+)
LOC110538915 LOC106605649 other downstream 525060 24540963 ~ 24544247 (+)
G124451 LOC106578403 other downstream 857107 24873051 ~ 24873834 (+)
LOC110534557 LOC106605501 other downstream 1361540 25377221 ~ 25396334 (+)
G125934 NA other downstream 1666936 25682880 ~ 25757853 (+)

Expression


Co-expression Network