tmem147 (LOC106605633)


Basic Information

Item Value
gene id tmem147
gene name LOC106605633
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 24077675 ~ 24081015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021625604.2
accacagccacaaagttataaaccccgcctatttctacaatttatattcttaaaatctgatttggaACCTTAGAAAatccacactgctaaccttatgcataaccaccctaaccttaaattaagaccaaaaggcacatttttgtttttaattttctACGATATAGCCAATtacgactttgtggctgtggtaactactgGAAAACTAGTTTCCGTCCTTCTACCAACGCGTTAGCAAACTAGCATTAGCATCTTAATAATCCCTCGGTCAACCTGAACTCGTTGGAGGATTCGCCAGTGTTGGACTCCCTGGCAATATGACGCTATTTCATTTCGGGAATTGCTTTGCCTTGGCTTATTTTCCCTACTTTATAACCTACAAATGCAGTGGATTATCAGAATATAATGCATTCTGGAGATGTGTTCAAGCAGGAGCTACCTACCTATTTGTGCAGCTATGCAAGATGCTATTTCTGGCCACATTTTTCCCTACGTGGGAGGGAGGAGCTGGCGTGTATGACTTTGTTGGTGAGTTTATGAAGGCCACGGTGGACCTAGCAGACCTTCTGGGCCTGCATCTGGTCATGTCCAGGAACGCAGGGAAGGGAGAGTACAAGATCATGGTGGCAGCGATGGGATGGGCCACAGCAGAGCTCGTTATGTCAAGGTGTATACCTCTATGGGTGGGTGccagaggcattgagtttgactGGAAGTACATACAGATGAGCTTCGACTCCAACATCAGCCTGGTGCACTATATCGCCATGGCAGCAGTGGTGTGGATGTTCACGCGGTACGACCTCCCGAAGAGCTTCCGTCTGCCTGTGACTGTACTGCTAGGGCTGTGTGTATACAAGGCCTTCCTCATGGAGTTGTTTGTCCATGTGTTCCTGCTGGGGAGCTGGACAGCCCTCCTGGTGAAGGCGGTGCTCACTGGATCcatctccctctgttctctcttcctTTTCGTCACACTGGTGCACAGCAACTGAGACTGGCTGGGAGCCCAAACAAAGAGggtctttaacacacacacacagggcctttCAACCAGACTGCGCCTGTACAGATTAATTTTGTATCGCTCAGAAAGATGGCAGGAATATGAGCATTCATGATTTCAGACTTTTTTTGTTATgatacttgttttttttaaatgtatgattTATTATTGTGCTGGAATTAGTACGGTAGATTGAGTATTTATAACAAGTGGATGACTCTTAAGCGTTGTAGTACAATTACTATACTACTTTAACATGTAAGCAGATGGTACAATACTGTTGTTACACTGTGTGTGCTCAGCTGCATTACTGCAGGTATGAAAGAGATTAACTTAATCTCATTCAACATGATGAAATACAAATGTTGGCACACTTCTTGTCACATGACTGAAGCAGCATAATGGCTTATTTATGTTGTAAGATTACATGACATGGTAACAGTGGGTTATGCTACTCTATGGAAATTTAGTGAGGTGTGTGTGAATGGCCAATAAATGACTTCATATGCTA
>XM_021625614.2
CCTTAGAAAatccacactgctaaccttatgcataaccaccctaaccttaaattaagaccaaaaggcacatttttgtttttaattttctACGATATAGCCAATtacgactttgtggctgtggtaactactgGAAAACTAGTTTCCGTCCTTCTACCAACGCGTTAGCAAACTAGCATTAGCATCTTAATAATCCCTCGGTCAACCTGAGTAAGTACAGACTCGTTGGAGGATTCGCCAGTGTTGGACTCCCTGGCAATATGACGCTATTTCATTTCGGGAATTGCTTTGCCTTGGCTTATTTTCCCTACTTTATAACCTACAAATGCAGTGGATTATCAGAATATAATGCATTCTGGAGATGTGTTCAAGCAGGAGCTACCTACCTATTTGTGCAGCTATGCAAGATGCTATTTCTGGCCACATTTTTCCCTACGTGGGAGGGAGGAGCTGGCGTGTATGACTTTGTTGGTGAGTTTATGAAGGCCACGGTGGACCTAGCAGACCTTCTGGGCCTGCATCTGGTCATGTCCAGGAACGCAGGGAAGGGAGAGTACAAGATCATGGTGGCAGCGATGGGATGGGCCACAGCAGAGCTCGTTATGTCAAGGTGTATACCTCTATGGGTGGGTGccagaggcattgagtttgactGGAAGTACATACAGATGAGCTTCGACTCCAACATCAGCCTGGTGCACTATATCGCCATGGCAGCAGTGGTGTGGATGTTCACGCGGTACGACCTCCCGAAGAGCTTCCGTCTGCCTGTGACTGTACTGCTAGGGCTGTGTGTATACAAGGCCTTCCTCATGGAGTTGTTTGTCCATGTGTTCCTGCTGGGGAGCTGGACAGCCCTCCTGGTGAAGGCGGTGCTCACTGGATCcatctccctctgttctctcttcctTTTCGTCACACTGGTGCACAGCAACTGAGACTGGCTGGGAGCCCAAACAAAGAGggtctttaacacacacacacagggcctttCAACCAGACTGCGCCTGTACAGATTAATTTTGTATCGCTCAGAAAGATGGCAGGAATATGAGCATTCATGATTTCAGACTTTTTTTGTTATgatacttgttttttttaaatgtatgattTATTATTGTGCTGGAATTAGTACGGTAGATTGAGTATTTATAACAAGTGGATGACTCTTAAGCGTTGTAGTACAATTACTATACTACTTTAACATGTAAGCAGATGGTACAATACTGTTGTTACACTGTGTGTGCTCAGCTGCATTACTGCAGGTATGAAAGAGATTAACTTAATCTCATTCAACATGATGAAATACAAATGTTGGCACACTTCTTGTCACATGACTGAAGCAGCATAATGGCTTATTTATGTTGTAAGATTACATGACATGGTAACAGTGGGTTATGCTACTCTATGGAAATTTAGTGAGGTGTGTGTGAATGGCCAATAAATGACTTCATATGCTA
>XM_036943064.1
GAAGAGAGGATGCTAGCAAACTCGTTGGAGGATTCGCCAGTGTTGGACTCCCTGGCAATATGACGCTATTTCATTTCGGGAATTGCTTTGCCTTGGCTTATTTTCCCTACTTTATAACCTACAAATGCAGTGGATTATCAGAATATAATGCATTCTGGAGATGTGTTCAAGCAGGAGCTACCTACCTATTTGTGCAGCTATGCAAGATGCTATTTCTGGCCACATTTTTCCCTACGTGGGAGGGAGGAGCTGGCGTGTATGACTTTGTTGGTGAGTTTATGAAGGCCACGGTGGACCTAGCAGACCTTCTGGGCCTGCATCTGGTCATGTCCAGGAACGCAGGGAAGGGAGAGTACAAGATCATGGTGGCAGCGATGGGATGGGCCACAGCAGAGCTCGTTATGTCAAGGTGTATACCTCTATGGGTGGGTGccagaggcattgagtttgactGGAAGTACATACAGATGAGCTTCGACTCCAACATCAGCCTGGTGCACTATATCGCCATGGCAGCAGTGGTGTGGATGTTCACGCGGTACGACCTCCCGAAGAGCTTCCGTCTGCCTGTGACTGTACTGCTAGGGCTGTGTGTATACAAGGCCTTCCTCATGGAGTTGTTTGTCCATGTGTTCCTGCTGGGGAGCTGGACAGCCCTCCTGGTGAAGGCGGTGCTCACTGGATCcatctccctctgttctctcttcctTTTCGTCACACTGGTGCACAGCAACTGAGACTGGCTGGGAGCCCAAACAAAGAGggtctttaacacacacacacagggcctttCAACCAGACTGCGCCTGTACAGATTAATTTTGTATCGCTCAGAAAGATGGCAGGAATATGAGCATTCATGATTTCAGACTTTTTTTGTTATgatacttgttttttttaaatgtatgattTATTATTGTGCTGGAATTAGTACGGTAGATTGAGTATTTATAACAAGTGGATGACTCTTAAGCGTTGTAGTACAATTACTATACTACTTTAACATGTAAGCAGATGGTACAATACTGTTGTTACACTGTGTGTGCTCAGCTGCATTACTGCAGGTATGAAAGAGATTAACTTAATCTCATTCAACATGATGAAATACAAATGTTGGCACACTTCTTGTCACATGACTGAAGCAGCATAATGGCTTATTTATGTTGTAAGATTACATGACATGGTAACAGTGGGTTATGCTACTCTATGGAAATTTAGTGAGGTGTGTGTGAATGGCCAATAAATGACTTCATATGCTA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021625604.2 False 1514 mRNA 0.44 7 24077675 24081015
XM_021625614.2 False 1457 mRNA 0.44 7 24077742 24081015
XM_036943064.1 True 1259 mRNA 0.45 7 24078086 24081015

Neighbor

gene id symbol gene type direction distance location
LOC100135863 LOC106577739 coding upstream 1450 24069369 ~ 24076225 (+)
LOC100136301 LOC106605632 coding upstream 23011 24041681 ~ 24054664 (+)
LOC110538629 LOC106605631 coding upstream 61731 24001565 ~ 24015944 (+)
LOC110538573 fxyd9b coding upstream 80313 23984319 ~ 23997362 (+)
LOC110538617 NA coding upstream 102717 23970410 ~ 23974958 (+)
LOC110538661 LOC106605634 coding downstream 25629 24106644 ~ 24124814 (+)
LOC110538727 LOC106605639 coding downstream 109875 24190890 ~ 24200234 (+)
LOC110538747 LOC106578439 coding downstream 120084 24201099 ~ 24238678 (+)
LOC110538776 LOC106605668 coding downstream 179373 24260388 ~ 24270406 (+)
LOC110538793 LOC106605640 coding downstream 215152 24296167 ~ 24320738 (+)
G124087 NA non-coding upstream 21555 24055823 ~ 24056120 (+)
G124080 NA non-coding upstream 50020 24027437 ~ 24027655 (+)
G124079 NA non-coding upstream 51586 24025804 ~ 24026089 (+)
G124069 NA non-coding upstream 86841 23988981 ~ 23990834 (+)
G124049 NA non-coding upstream 93615 23980826 ~ 23984060 (+)
G124113 NA non-coding downstream 34432 24115447 ~ 24115658 (+)
G124115 NA non-coding downstream 36217 24117232 ~ 24117456 (+)
G124119 NA non-coding downstream 48583 24129598 ~ 24129956 (+)
G124122 LOC106578386 non-coding downstream 65051 24146066 ~ 24146722 (+)
G124124 LOC106605585 non-coding downstream 68078 24149093 ~ 24154800 (+)
LOC110538497 LOC106605627 other upstream 196039 23861576 ~ 23881639 (+)
G123980 NA other upstream 252173 23824693 ~ 23825502 (+)
G122459 LOC106578191 other upstream 1266412 22810767 ~ 22811263 (+)
apoc4 NA other upstream 1727739 22348543 ~ 22349936 (+)
LOC110537939 apoc1 other upstream 1731060 22342491 ~ 22346615 (+)
G124121 LOC106605585 other downstream 65846 24146861 ~ 24148593 (+)
LOC110538915 LOC106605649 other downstream 459989 24540963 ~ 24544247 (+)
G124451 LOC106578403 other downstream 792036 24873051 ~ 24873834 (+)
LOC110534557 LOC106605501 other downstream 1296469 25377221 ~ 25396334 (+)
G125934 NA other downstream 1601865 25682880 ~ 25757853 (+)

Expression


Co-expression Network