LOC118938772 (cg024)


Basic Information

Item Value
gene id LOC118938772
gene name cg024
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26576953 ~ 26579337 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036943657.1
TATGGCAGTAATCTGCTGAAGGTAAAACTGCAGTTGAATAATCCATTCTCAGTTTTTGTTACAACGGGCAGTTTGAAGGATCATGTGATTTAAATTTGGATACTGGAAGAAAGAGTTCAACAACACCAACTCTTGGCATGGAATTTGTTGCTACTATATAAGAGTCCAAGAGATATGTGGTCTGGAAGATGGACAAGGACAACCTCATCAGTTTAGACAAGCAGGAAGGAGTGGGAATAGGATTCTACAGTCCACTAGATGTTACCATTAACACAGACGAGGGAGAGGTCCTCTGTCGAACCTACCAGATGAACAACTTCACAGTTCACCAGACCTCACCTCCATACAAACAGGTTGTTTTTGTCTTGGAGCAAAACAAAACTGGCTTACCTCTGGATTATATTAAGAAGCTGGAGGCAGTGGAAACCAACGGCTACAGCGGTCCGTCCATTTTAGATGACATCACCGCGTTGAAACCTGCTGATAAAGGAAAAAGCTTGTAGATGGTACCAGAGGAAAGAAGATGAAAGAGAA
>XR_005036029.1
tggaaaaagtacccaattgccatacttgagtaaaagtaaatataccttaatagaaaatgactcaaataaaagtgGAACGAGTgtttcaaacacatcaaacacgtgTTTGACTACTTTCTGTTTCGTTTATGGCAGTAATCTGCTGAAGGTAAAACTGCAGTTGAATAATCCATTCTCAGTTTTTGTTACAACGGGCAGTTTGAAGGATCATGTGATTTAAATTTGGATACTGGAAGAAAGAGTTCAACAACACCAACTCTTGGCATGGAATTTGTTGCTACTATATAAGAGTCCAAGAGATATGTGGTCTGGAAGATGGACAAGGACAACCTCATCAGTTTAGACAAGTCCTAGTAAAATTCTGGTTCCAGTGGAAAGAGTGATACAACTGATTGAACGTACAGTATGTCGGCAGGAAGGAGTGGGAATAGGATTCTACAGTCCACTAGATGTTACCATTAACACAGACGAGGGAGAGGTCCTCTGTCGAACCTACCAGATGAACAACTTCACAGTTCACCAGACCTCACCTCCATACAAACAGGTTGTTTTTGTCTTGGAGCAAAACAAAACTGGCTTACCTCTGGATTATATTAAGAAGCTGGAGGCAGTGGAAACCAACGGCTACAGCGGTCCGTCCATTTTAGATGACATCACCGCGTTGAAACCTGCTGATAAAGGAAAAAGCTTGTAGATGGTACCAGAGGAAAGAAGATGAAAGAGAA

Function

NR:

description
gamma-glutamylcyclotransferase-like

GO:

id name namespace
GO:0006750 glutathione biosynthetic process biological_process
GO:0003839 gamma-glutamylcyclotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036943657.1 False 534 mRNA 0.42 4 26576953 26579210
XR_005036029.1 True 725 mRNA 0.40 5 26576953 26579337

Neighbor

gene id symbol gene type direction distance location
LOC110539162 LOC106605511 coding downstream 17819 26550832 ~ 26559134 (-)
LOC110539098 LOC106605503 coding downstream 786694 25669026 ~ 25790259 (-)
si:ch211-198c19.1 LOC106605502 coding downstream 1116071 25459554 ~ 25460882 (-)
LOC110539072 cep162 coding downstream 1133437 25428983 ~ 25443516 (-)
LOC110533704 cep162 coding downstream 1149254 25417440 ~ 25427699 (-)
ggctb ggct coding upstream 6454 26585791 ~ 26588645 (-)
LOC110539269 LOC106579366 coding upstream 50239 26629576 ~ 26640996 (-)
LOC110539285 LOC106579350 coding upstream 62621 26641958 ~ 26675649 (-)
lars2 lars2 coding upstream 104021 26683358 ~ 26726160 (-)
LOC110485094 LOC106605523 coding upstream 181048 26760385 ~ 26762634 (-)
G127085 NA non-coding downstream 12621 26564092 ~ 26564332 (-)
G127084 NA non-coding downstream 14225 26562396 ~ 26562728 (-)
G127051 NA non-coding downstream 29451 26543904 ~ 26547502 (-)
G126992 NA non-coding downstream 138698 26436470 ~ 26438255 (-)
G126944 NA non-coding downstream 217317 26359141 ~ 26359636 (-)
G127080 NA non-coding upstream 46829 26626166 ~ 26626619 (-)
G127074 NA non-coding upstream 47356 26626693 ~ 26628603 (-)
G127131 NA non-coding upstream 104831 26684168 ~ 26684638 (-)
G127268 NA non-coding upstream 157504 26736841 ~ 26737779 (-)
G127083 NA other downstream 14826 26561614 ~ 26562127 (-)
G125305 NA other downstream 1800326 24775220 ~ 24776627 (-)
LOC110538887 LOC106605647 other downstream 2042424 24531424 ~ 24540898 (-)
G125043 NA other downstream 2252117 24324580 ~ 24324836 (-)
G125003 NA other downstream 2306817 24269226 ~ 24270136 (-)
LOC110485245 ubr5 other upstream 691923 27231538 ~ 27278158 (-)
G129250 NA other upstream 1186820 27766157 ~ 27766532 (-)
LOC110485663 LOC106579570 other upstream 1517345 27933389 ~ 28149986 (-)
G129582 NA other upstream 1730982 28310319 ~ 28310732 (-)

Expression


Co-expression Network