ggctb (ggct)


Basic Information

Item Value
gene id ggctb
gene name ggct
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26585791 ~ 26588645 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021626147.2
CCAACAGGGGTGTAAACATAAATCCATGTGCATGCAAGCAAACATGACTGATGGATTGGCCTATTTGTCAAAGCATCAGCTGCAACACACCACTAACTTCTCTGTCCACAAGACAGCGCTATGCAGGCTTGTTGCATCACACTGTGAATGACATGCTGGTGTGACTGTGAGCTCAGCCAGCTCAGGCCATAAGGCTCAGCAACCAGCAGGCTGTTTGTGTATTGTGTGGCAGTGGTGGGCAGCgcacagtacagcacagggcAGGCCCGATGGATTAGCATGATAATGGGGAGTCAGTGAGTGGAGAGAGGGCTGGTATAAAAGAGGGGGGTGCAGAGTTTGATCTCTGTCACAGTAGCGCTCATGACCTCACCTTGCGTCTCTGCTCCGCCTCCAAGCACTCTTGCTGACTGTggtttctctctattctctcctcctccctcctcctccttgtctTCCCTTGACTCATCCTCCTTGTCTTCCcttgactcctcctcctcaccctgcccttcctcctcctgctcctactccttctcctcctctctgtcagcaTGGATGACAACATAGAAATCCACACCTTCCTGTACTTTGCCTACGGCAGTAACCTACTGAAGGAAAGGCTCCAGCTCAAGAACCCCTCCGCTTCCATCCACTGTGTGGCCAGGCTCAAGgaCTACAAGCTGATATTTGGGAACTACAAGGGTCTGGCCAGTGACCGCTGGCATGGGGGTGTGGCGACCATCGAGAACAGCCCAGCGGACGAGGTGTGGGGAGTGGTATGGAGGATGAACGTGGCTGACCTCGAGTCTCTAGACAGccaggAGAACGTGAGACTAGGGGCCTACAGCCCTGTGGAGGTGAATGTGAAGACTCGGGGCCAAGAGCTCAACTGTCGCACCTACATCATGAACAGCTGTATTTACGCTCCACCGTCTCCACAGTACCTCAAGGTGATTTTAATGGGGGCGGAGCAGAATGGCTTGCCAAAGAACTACCAGGAGAAGCTGAGGTCCATCGAGACCAACAAGTATGAGGGCCCACTGCCTGTCATGGCTGAGCTGGAGCGGATTATGAAAAGAGCTAAGGAGAGAGCCAATCACCGATCTGACGCTTAACAACACCTGAAACAAACTGCCATGTTTAGGAACTCAACTCCTGGTAGGACAATTGAAGCAAACTTCTACAACTTCCACTGTCCTACCAAGAGTTGTTGAATATCTTCTCATC

Function

symbol description
ggct Enables gamma-glutamylcyclotransferase activity and protein homodimerization activity. Involved in release of cytochrome c from mitochondria. Located in cytosol.

NR:

description
gamma-glutamylcyclotransferase-like

GO: NA

KEGG:

id description
K00682 GGCT; gamma-glutamylcyclotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021626147.2 True 1227 mRNA 0.52 4 26585791 26588645

Neighbor

gene id symbol gene type direction distance location
LOC118938772 cg024 coding downstream 6454 26576953 ~ 26579337 (-)
LOC110539162 LOC106605511 coding downstream 26657 26550832 ~ 26559134 (-)
LOC110539098 LOC106605503 coding downstream 795532 25669026 ~ 25790259 (-)
si:ch211-198c19.1 LOC106605502 coding downstream 1124909 25459554 ~ 25460882 (-)
LOC110539072 cep162 coding downstream 1142275 25428983 ~ 25443516 (-)
LOC110539269 LOC106579366 coding upstream 40931 26629576 ~ 26640996 (-)
LOC110539285 LOC106579350 coding upstream 53313 26641958 ~ 26675649 (-)
lars2 lars2 coding upstream 94713 26683358 ~ 26726160 (-)
LOC110485094 LOC106605523 coding upstream 171740 26760385 ~ 26762634 (-)
LOC110485095 LOC106579313 coding upstream 193151 26781796 ~ 26786984 (-)
G127085 NA non-coding downstream 21459 26564092 ~ 26564332 (-)
G127084 NA non-coding downstream 23063 26562396 ~ 26562728 (-)
G127051 NA non-coding downstream 38289 26543904 ~ 26547502 (-)
G126992 NA non-coding downstream 147536 26436470 ~ 26438255 (-)
G126944 NA non-coding downstream 226155 26359141 ~ 26359636 (-)
G127080 NA non-coding upstream 37521 26626166 ~ 26626619 (-)
G127074 NA non-coding upstream 38048 26626693 ~ 26628603 (-)
G127131 NA non-coding upstream 95523 26684168 ~ 26684638 (-)
G127268 NA non-coding upstream 148196 26736841 ~ 26737779 (-)
G127083 NA other downstream 23664 26561614 ~ 26562127 (-)
G125305 NA other downstream 1809164 24775220 ~ 24776627 (-)
LOC110538887 LOC106605647 other downstream 2051262 24531424 ~ 24540898 (-)
G125043 NA other downstream 2260955 24324580 ~ 24324836 (-)
G125003 NA other downstream 2315655 24269226 ~ 24270136 (-)
LOC110485245 ubr5 other upstream 682615 27231538 ~ 27278158 (-)
G129250 NA other upstream 1177512 27766157 ~ 27766532 (-)
LOC110485663 LOC106579570 other upstream 1508037 27933389 ~ 28149986 (-)
G129582 NA other upstream 1721674 28310319 ~ 28310732 (-)

Expression


Co-expression Network