trnar-acg-2


Basic Information

Item Value
gene id trnar-acg-2
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26641167 ~ 26641239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnar-acg-2
GGGctagtggcgcaatggataacgcgtctgactacggatcagaagattctaggttcgactcctggctagCTCG

Function

NR:

description
PREDICTED: uncharacterized protein LOC109530881 isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-acg-2 True 73 mRNA 0.56 1 26641167 26641239

Neighbor

gene id symbol gene type direction distance location
LOC110539196 LOC106605517 coding upstream 27730 26596265 ~ 26613437 (+)
LOC110539212 LOC106605509 coding upstream 55726 26581768 ~ 26585441 (+)
LOC110539182 LOC106605509 coding upstream 59371 26579758 ~ 26581796 (+)
LOC110539173 LOC106605512 coding upstream 93664 26452681 ~ 26547503 (+)
cdk14 LOC106605507 coding upstream 310186 26123713 ~ 26330981 (+)
LOC110485091 LOC106605521 coding downstream 97685 26738924 ~ 26741780 (+)
LOC110485092 LOC106605522 coding downstream 105732 26746971 ~ 26765817 (+)
rwdd1 rwdd1 coding downstream 129225 26770464 ~ 26779479 (+)
LOC110485096 LOC106605526 coding downstream 172245 26813484 ~ 26823336 (+)
LOC110485145 LOC106579269 coding downstream 256690 26897929 ~ 26903411 (+)
G126695 NA non-coding upstream 77825 26563047 ~ 26563342 (+)
G126694 NA non-coding upstream 79159 26561498 ~ 26562008 (+)
G126664 LOC106579390 non-coding upstream 82531 26558016 ~ 26558636 (+)
G126679 NA non-coding upstream 114131 26525778 ~ 26527036 (+)
G126748 NA non-coding downstream 18773 26660012 ~ 26661367 (+)
G127165 LOC106605523 non-coding downstream 119203 26760442 ~ 26761528 (+)
G127188 NA non-coding downstream 150789 26792028 ~ 26792291 (+)
G127202 NA non-coding downstream 184073 26825312 ~ 26825904 (+)
G127209 NA non-coding downstream 187009 26828248 ~ 26828451 (+)
G126727 LOC106581475 other upstream 12518 26626849 ~ 26628649 (+)
G126387 LOC105417071 other upstream 591063 26049850 ~ 26050104 (+)
G125934 NA other upstream 883314 25682880 ~ 25757853 (+)
LOC110534557 LOC106605501 other upstream 1258855 25377221 ~ 25396334 (+)
G124451 LOC106578403 other upstream 1767333 24873051 ~ 24873834 (+)
G127190 cf113 other downstream 152971 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 216459 26857698 ~ 26861242 (+)
LOC110485212 LOC106605536 other downstream 506937 27147880 ~ 27175747 (+)
G127644 LOC106605534 other downstream 548752 27189991 ~ 27190593 (+)
LOC110485466 LOC106605529 other downstream 660839 27288172 ~ 27303644 (+)

Expression


Co-expression Network