Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110485092 |
| gene name | LOC106605522 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 26746971 ~ 26765817 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| CUB domain-containing protein 1-like |
| id | description |
|---|---|
| K06732 | CDCP1, CD318; CUB domain-containing protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021556142.2 | True | 2855 | mRNA | 0.54 | 10 | 26746971 | 26765817 |
26,728,000
26,732,000
26,736,000
26,740,000
26,744,000
26,748,000
26,752,000
26,756,000
26,760,000
26,764,000
26,768,000
NC_048566.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485091 | LOC106605521 | coding | upstream | 5191 | 26738924 ~ 26741780 (+) |
| trnar-acg-2 | NA | coding | upstream | 105732 | 26641167 ~ 26641239 (+) |
| LOC110539196 | LOC106605517 | coding | upstream | 133534 | 26596265 ~ 26613437 (+) |
| LOC110539212 | LOC106605509 | coding | upstream | 161530 | 26581768 ~ 26585441 (+) |
| LOC110539182 | LOC106605509 | coding | upstream | 165175 | 26579758 ~ 26581796 (+) |
| rwdd1 | rwdd1 | coding | downstream | 4647 | 26770464 ~ 26779479 (+) |
| LOC110485096 | LOC106605526 | coding | downstream | 47667 | 26813484 ~ 26823336 (+) |
| LOC110485145 | LOC106579269 | coding | downstream | 132112 | 26897929 ~ 26903411 (+) |
| LOC110533712 | NA | coding | downstream | 139084 | 26904901 ~ 26909167 (+) |
| LOC110485187 | LOC106605537 | coding | downstream | 151578 | 26917395 ~ 26934478 (+) |
| G126748 | NA | non-coding | upstream | 85604 | 26660012 ~ 26661367 (+) |
| G126695 | NA | non-coding | upstream | 183629 | 26563047 ~ 26563342 (+) |
| G126694 | NA | non-coding | upstream | 184963 | 26561498 ~ 26562008 (+) |
| G126664 | LOC106579390 | non-coding | upstream | 188335 | 26558016 ~ 26558636 (+) |
| G126680 | NA | non-coding | upstream | 219969 | 26526699 ~ 26527002 (+) |
| G127188 | NA | non-coding | downstream | 26211 | 26792028 ~ 26792291 (+) |
| G127202 | NA | non-coding | downstream | 59495 | 26825312 ~ 26825904 (+) |
| G127209 | NA | non-coding | downstream | 62431 | 26828248 ~ 26828451 (+) |
| G127211 | NA | non-coding | downstream | 64378 | 26830195 ~ 26830696 (+) |
| G127216 | NA | non-coding | downstream | 68290 | 26834107 ~ 26855129 (+) |
| G126727 | LOC106581475 | other | upstream | 118322 | 26626849 ~ 26628649 (+) |
| G126387 | LOC105417071 | other | upstream | 696867 | 26049850 ~ 26050104 (+) |
| G125934 | NA | other | upstream | 989118 | 25682880 ~ 25757853 (+) |
| LOC110534557 | LOC106605501 | other | upstream | 1364659 | 25377221 ~ 25396334 (+) |
| G124451 | LOC106578403 | other | upstream | 1873137 | 24873051 ~ 24873834 (+) |
| G127190 | cf113 | other | downstream | 28393 | 26794210 ~ 26795762 (+) |
| G127198 | LOC106605538 | other | downstream | 91881 | 26857698 ~ 26861242 (+) |
| LOC110485212 | LOC106605536 | other | downstream | 382359 | 27147880 ~ 27175747 (+) |
| G127644 | LOC106605534 | other | downstream | 424174 | 27189991 ~ 27190593 (+) |
| LOC110485466 | LOC106605529 | other | downstream | 536261 | 27288172 ~ 27303644 (+) |
