LOC110485118 (cndp1)


Basic Information

Item Value
gene id LOC110485118
gene name cndp1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26849743 ~ 26858369 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021556194.2
ATAACATTTTCAAGTGTTAACCAATATATAAAAACTGTTTCACaataccaccacaccaccaaGGCATAAAAGTAGCCACAAAAACCGAGAGCAGCAAAATTGCAGTTCTCTCTTTATGTCTGGCACATGGACACTCTTTTCGTCGGCATTATGACAAAGTTCATTGTTGTTGCATTCTTGTTACTCCACACATCGGTttcctcttcgtcctcctcttcctcttctcctggagCAGCAGGCATGTTGAAACAACTGTTTCAATACATAGATGACCACCAAAATCAGTTTGTTCAGAGGCTGAGGGAGTGGGTTGCTGTTCAGAGTGACTCAGGAGATCACACAAAATGGGGAGAAGTTGAAAGGATCCTGAACATGACAGCAGTGAGGATCCAAGAGATGGGAGGCACAGTGGACATTGCAGATGTAGGCACTCATCAGCTGCCCAGTGGGGAGACTGTGTCACTTCCACCGGTGATACTGGCTGAGTTTGAGAGGGACCCAAAGAAAGCTACTCTCTGTATCTACGGCCATGTGGATGTCCAGCCAGCCAAGATGGCGGATGGCTGGACCACTGACCCCTTCAATCTAACAGAAATCAAAGGTAACCTGTATGGGCGAGGGGCCACGGACAACAAAGGGCCGGTCCTGGCCTGGCTTCATGCTGTTGAGTCCTACCAGGCCACAGAGAAGGAGATACCAGTGAATATAAAACTCATCATTGAGGGTCTGGAGGAGGTGGGCTCATACGGTCTGTTGGAGTTGACCAGGAAGAGAAACGACAGCTTCTTTGCAGATGTGGACTTCATAGTGATCTCTGACAACGTGTGGGCGACCAGAAACCCAGCCCTGACCTATGGAACCAGAGGGAGCAGCTATTTCTTTGTGGAGGTTGATGGCCCTAAACTGGACTTCCATTCTGGAGTGTATGGGGGTTCTATCCAGGAGCCCATGTCAGATCTGATAGCCTTACTGGGAAGTCTGTTGGACCACACAGGTAAGATCCTGGTTCCTGGGGTCACTGATGATGTCGCGCCCCTCACTGAGGATGAGAGGAAGCTCTATGACAACATTAGCTTTGACCTGGAGGAGATGAAGAGTGTGGCTGGGGTCAAACACTTCCTACAGGACACTAAGGAGGAAGTCCTCATGGCTCGATGGCGTAACCCATCCTTGTCCATCCACGGGATCCAGGGGGCCTTCTCAGAACCAGGCACCAAAACTGTCATCCCCAAACAGGTCACAGGGAAGTTCTCCATCCGACAGGTCCCCAACATGGACCCTCCAGATGTGGAGAGGAAGGTGAAGGAGCACCTTCAGCAGGTCTTCTCCACTCTAAAAAGCCCTAACAGGCTGAGGGTGACCGCAACTGTTGGGGCTAAACCATGGGTGGCTAACCTGAAGAACCCACAGTACGTTGCCGGACAAAGGGCAGTCAGAGAGGTGTTTGGAGTGGAACCGGAACTGATCCGTGAGGGCTCCACCATCCCTATCGCTCAGAACTTCCAAGAGGAGACAGGCAAGAGTGTGATGATGCTGCCTATAGGAGGCCATGATGATGGAGAGCACTCTCAGAACGAGAAGATCAGCAGGTACAACTACATTGAGGGGACGAAGCTGTTTGCTGCTTATTTTTATGAGCTTTCACTAGTAAAGTAGGTGCAGGATATATTTCTATCCAAGCTGTGACCATGATAAATATGCTGTAGGGGACAGCATTGTGCTACTTGAGTGCCCGGGTTTCCGTCAATAATGTTTGATTCCATGCTGTGACTCCACTCTcccagggtgtctcagggggagtgggaTATGCAACCAACACATGTCCATTTCACTACACAATGGATAGgttacacacttgtacatgtgtgtaaCAGGAAAAATATAACCACCCCTATTCGACCTTTGAACAGGTATTATTACATAGCCTGAATGAGGGTTATTGCATAAGTACAACATTTTAGCCCCCTCTAGAATAACTATttctactatttgtatttgtTGCATGTATTCTACTGTGGATTAACTAATAAAGGGGGCAAAGACaaatggtga

Function

symbol description
cndp1 Enables dipeptidase activity. Acts upstream of or within proteolysis and regulation of cellular protein metabolic process. Located in cytosol. Implicated in glomerulonephritis.

NR:

description
beta-Ala-His dipeptidase-like isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K05604 CNDP1; beta-Ala-His dipeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021556194.2 True 2052 mRNA 0.48 12 26849743 26858369

Neighbor

gene id symbol gene type direction distance location
LOC110485107 LOC106605539 coding downstream 10621 26834664 ~ 26839122 (-)
LOC110534567 cf113 coding downstream 35084 26794149 ~ 26814659 (-)
LOC110485095 LOC106579313 coding downstream 62759 26781796 ~ 26786984 (-)
LOC110485094 LOC106605523 coding downstream 87109 26760385 ~ 26762634 (-)
lars2 lars2 coding downstream 123583 26683358 ~ 26726160 (-)
LOC110485134 LOC106605538 coding upstream 42 26858411 ~ 26863425 (-)
LOC110485162 LOC106605541 coding upstream 53029 26911398 ~ 26917150 (-)
LOC110485234 LOC106605534 coding upstream 326141 27184510 ~ 27202253 (-)
LOC110485460 LOC106605533 coding upstream 344821 27203190 ~ 27215402 (-)
LOC110485403 NA coding upstream 357603 27215972 ~ 27231128 (-)
G127307 NA non-coding downstream 27144 26820766 ~ 26822599 (-)
G127268 NA non-coding downstream 111964 26736841 ~ 26737779 (-)
G127131 NA non-coding downstream 165105 26684168 ~ 26684638 (-)
LOC110539285 LOC106579350 non-coding downstream 200836 26641958 ~ 26675649 (-)
G127074 NA non-coding downstream 221140 26626693 ~ 26628603 (-)
G127342 NA non-coding upstream 20081 26878450 ~ 26914822 (-)
G127323 NA non-coding upstream 43654 26902023 ~ 26903399 (-)
G127372 NA non-coding upstream 77103 26935472 ~ 26935844 (-)
G127382 NA non-coding upstream 84394 26942763 ~ 26943032 (-)
G127391 NA non-coding upstream 90179 26948548 ~ 26948780 (-)
G127083 NA other downstream 287616 26561614 ~ 26562127 (-)
G125305 NA other downstream 2073116 24775220 ~ 24776627 (-)
LOC110538887 LOC106605647 other downstream 2315214 24531424 ~ 24540898 (-)
G125043 NA other downstream 2524907 24324580 ~ 24324836 (-)
LOC110485245 ubr5 other upstream 412891 27231538 ~ 27278158 (-)
G129250 NA other upstream 907788 27766157 ~ 27766532 (-)
LOC110485663 LOC106579570 other upstream 1238313 27933389 ~ 28149986 (-)
G129582 NA other upstream 1451950 28310319 ~ 28310732 (-)
LOC110534614 LOC106605399 other upstream 1618817 28475823 ~ 28533709 (-)

Expression


Co-expression Network