LOC110533712


Basic Information

Item Value
gene id LOC110533712
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26904901 ~ 26909167 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934604.1
ctccacgaggagcctgcctgttacacgaatgcagtaagaagccaagTAGAGAAGATGGTGGAGATAGGGATGGAGATCCTTCAGAAGAACAATGTCTTAGACCTCAGAGATGTTAGGTTTGGCTTCCACTGGCCCCCATTCTGTTCTGTCTCTCACCTGCATCACCATGTGTTGGCACCTGCCAGTCAAATGGGCTTCATGTCCCGCCTCTTCTACAGACCCAACTCCTATTGGTTTGTCATGATACACTACATGAGCTTGACAATGGACTGGAAATTCAGACATCAAAAAGCCATGAAGAAGCCATGAATTGTAATTTATTTATTATTGTACTATGTGTGTTTGTCTACTTCAGGCGGACCAGTTGATTCAGCAGCTGAACTCTTAAGGGAGAGACCAACTGAGTGGTGGGTTGCAGTCTGGGCTGGTCCAGTGAGAAACGGGGTTACCTTACTAGTAGTGAAGTGAGCACGTCAGGACTGTTCTGGTCTCCCTCCGTGGTTCTCTGTGTGAGAGTACTATACTCCCTAGCAGGTTACAGTGAGACTAGTGATGATGGTACAAATCAACTCAACTGAGGTTTTTAATTCTACTATCAAGCTGAACAGTCAAATCAGAAATTAAGCTAAATATTTTTTCCTTCTAATTCTAAAAACTTTTGTGAAAATTACCAATAGTTACGCTTTATTTTTTAGCACAGTATATGAAATAGTAATGACTGGAATGATTTTGGGGTCATTTTACCCTTGGTAAAGAAAGATATCAAAAGTGAtacaaatatacactgctcataaaaataaagggaacactaaaataacacatcctagatctgaatgaatgaaatattcttattaaatagttttttctttacatagttcaatgtgctgacaacaaaatc

Function

NR:

description
LOW QUALITY PROTEIN: histidine triad nucleotide-binding protein 3-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934604.1 True 898 mRNA 0.40 4 26904901 26909167

Neighbor

gene id symbol gene type direction distance location
LOC110485145 LOC106579269 coding upstream 1490 26897929 ~ 26903411 (+)
LOC110485096 LOC106605526 coding upstream 81565 26813484 ~ 26823336 (+)
rwdd1 rwdd1 coding upstream 125422 26770464 ~ 26779479 (+)
LOC110485092 LOC106605522 coding upstream 139084 26746971 ~ 26765817 (+)
LOC110485091 LOC106605521 coding upstream 163121 26738924 ~ 26741780 (+)
LOC110485187 LOC106605537 coding downstream 8228 26917395 ~ 26934478 (+)
LOC110485212 LOC106605536 coding downstream 238713 27147880 ~ 27175747 (+)
LOC110485224 rn146 coding downstream 269820 27178987 ~ 27182559 (+)
LOC110485466 LOC106605529 coding downstream 379005 27288172 ~ 27303644 (+)
LOC110485500 LOC106579140 coding downstream 412383 27321550 ~ 27331169 (+)
G127200 NA non-coding upstream 41464 26861292 ~ 26863437 (+)
G127198 LOC106605538 non-coding upstream 45516 26857698 ~ 26861242 (+)
G127216 NA non-coding upstream 49772 26834107 ~ 26855129 (+)
G127211 NA non-coding upstream 74205 26830195 ~ 26830696 (+)
G127209 NA non-coding upstream 76450 26828248 ~ 26828451 (+)
G127256 NA non-coding downstream 27251 26936418 ~ 26936967 (+)
G127376 NA non-coding downstream 30505 26939672 ~ 26939929 (+)
G127381 NA non-coding downstream 32989 26942156 ~ 26942373 (+)
G127390 NA non-coding downstream 39061 26948228 ~ 26948446 (+)
G127396 NA non-coding downstream 42771 26951938 ~ 26952282 (+)
G127190 cf113 other upstream 109139 26794210 ~ 26795762 (+)
G126727 LOC106581475 other upstream 276252 26626849 ~ 26628649 (+)
G126387 LOC105417071 other upstream 854797 26049850 ~ 26050104 (+)
G125934 NA other upstream 1147048 25682880 ~ 25757853 (+)
G127644 LOC106605534 other downstream 280824 27189991 ~ 27190593 (+)
G128185 NA other downstream 807315 27716482 ~ 27717163 (+)
G128436 NA other downstream 1179480 28088647 ~ 28089445 (+)

Expression


Co-expression Network