Item | Value |
---|---|
gene id | LOC110485403 |
gene name | NA |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 27215972 ~ 27231128 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
protein LYRIC-like isoform X2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021556485.2 | False | 2769 | mRNA | 0.47 | 13 | 27215972 | 27231125 |
XM_021556499.2 | False | 2733 | mRNA | 0.47 | 12 | 27215972 | 27231125 |
XM_021556518.2 | False | 2700 | mRNA | 0.47 | 12 | 27215972 | 27231125 |
XM_021556527.2 | False | 2664 | mRNA | 0.47 | 11 | 27215972 | 27231125 |
XM_021556479.2 | False | 2794 | mRNA | 0.47 | 13 | 27215972 | 27231126 |
XM_021556503.2 | False | 2731 | mRNA | 0.47 | 12 | 27215972 | 27231126 |
XM_021556512.2 | False | 2725 | mRNA | 0.47 | 12 | 27215972 | 27231126 |
XM_021556491.2 | False | 2768 | mRNA | 0.47 | 13 | 27215972 | 27231127 |
XM_021556483.2 | True | 2793 | mRNA | 0.47 | 13 | 27215972 | 27231128 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110485460 | LOC106605533 | coding | downstream | 570 | 27203190 ~ 27215402 (-) |
LOC110485234 | LOC106605534 | coding | downstream | 13719 | 27184510 ~ 27202253 (-) |
LOC110485162 | LOC106605541 | coding | downstream | 298822 | 26911398 ~ 26917150 (-) |
LOC110485134 | LOC106605538 | coding | downstream | 352547 | 26858411 ~ 26863425 (-) |
LOC110485118 | cndp1 | coding | downstream | 357603 | 26849743 ~ 26858369 (-) |
LOC110485245 | ubr5 | coding | upstream | 410 | 27231538 ~ 27278158 (-) |
LOC110485483 | LOC106605528 | coding | upstream | 77386 | 27308514 ~ 27317719 (-) |
LOC110533720 | LOC106605543 | coding | upstream | 150213 | 27381341 ~ 27385479 (-) |
LOC110485571 | oxr1 | coding | upstream | 188518 | 27419646 ~ 27633110 (-) |
LOC110485644 | LOC106579058 | coding | upstream | 447180 | 27678308 ~ 27825113 (-) |
G127607 | NA | non-coding | downstream | 75252 | 27140502 ~ 27140720 (-) |
G127596 | NA | non-coding | downstream | 85079 | 27130539 ~ 27130893 (-) |
G127579 | NA | non-coding | downstream | 97299 | 27118446 ~ 27118673 (-) |
G127504 | NA | non-coding | downstream | 171280 | 27044416 ~ 27044692 (-) |
G127945 | NA | non-coding | upstream | 59116 | 27290244 ~ 27293324 (-) |
G127905 | LOC106579140 | non-coding | upstream | 90346 | 27321474 ~ 27331163 (-) |
G127991 | NA | non-coding | upstream | 136763 | 27367891 ~ 27369610 (-) |
G128001 | NA | non-coding | upstream | 158460 | 27389588 ~ 27389825 (-) |
G128003 | NA | non-coding | upstream | 159741 | 27390869 ~ 27392647 (-) |
LOC110539285 | LOC106579350 | other | downstream | 552958 | 26641958 ~ 26675649 (-) |
G127083 | NA | other | downstream | 653845 | 26561614 ~ 26562127 (-) |
G125305 | NA | other | downstream | 2439345 | 24775220 ~ 24776627 (-) |
LOC110538887 | LOC106605647 | other | downstream | 2681443 | 24531424 ~ 24540898 (-) |
G125043 | NA | other | downstream | 2891136 | 24324580 ~ 24324836 (-) |
G129250 | NA | other | upstream | 535029 | 27766157 ~ 27766532 (-) |
LOC110485663 | LOC106579570 | other | upstream | 865554 | 27933389 ~ 28149986 (-) |
G129582 | NA | other | upstream | 1079191 | 28310319 ~ 28310732 (-) |
LOC110534614 | LOC106605399 | other | upstream | 1246058 | 28475823 ~ 28533709 (-) |