LOC110485483 (LOC106605528)


Basic Information

Item Value
gene id LOC110485483
gene name LOC106605528
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27308514 ~ 27317719 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021556566.2
tctgtctcattgttctatctgtgtttctttctctctgtcgacTTCGGCAGTTTTGCTCGCTGCGTAGCTACGAAAGGGTTCGATTTAGCTTCAAATCTCGATCTGCACCTCCGCTTTGATGGCATTTTTTCTTTCCTATAGTGCCCCCGCCACTCTTTGAAAATTCCACCTAAAAGGAAAAAACGATCCACCCCAAATATTGGGTTTTATTCTCACGTGTACAATTACTACCCAGAGGGCTTAGGGGCGGCTCTCCGCCGAGAGCCGTTCGACTTCAACGCTGAGCCACCTTGGGATCCTAGCTGATAGTGGGGGAGCTCCATCTCCTAACTCGTCCATTTTGCTGCATACTATCAAGGACCCCAGGGGCTCAGAGAGAGACCACTTCGCCCAGGGGCTCAGAGAGAGACCACTTCAGCCAGGGGCTCAAAGAGACCACTTCATACAGAGGATCAGAGAGAGACCACTTCACACAGGCATAATTCTTTATGACTGGCAGATTAGCAGACAACAGTTGAGATGAAGGGACTAGCTGACGAACCAAACTACTCCGTCGCCCTGCTGGAGGGAGCCACGGCCCTCAGCGATGTGGTTGAGAATCACATTTATGAACAAACACTGGCTGAGAAGAATGCGTTCTTCGTGGCAGACTTGGGGGTCCTTATGAGGCAACATGTTCGCTGGCGAACCCACATGCCCCAGATGCGTCCCTTCTACGCTGTCCAAGCCAACAGCAGCCTGGCTGTCATTGAGATCTTAGCTGCTCTCGGGACTGGCTTCATCTGCACCAGCAAGTATGAGTTGGAGCTTGTGCAGGGCTATGGCGTTCCCTCTGAAGACATTATCTACAGCGGTGTGTGTAAACAACTCTCCCAGATCAAGTATGCCGCTAAGAACGGCATCGACTTCCTGGTGTGTGACAACGAGGCAGAGCTACGCAAGATCGCTCGCTGCCATCCCTGTGCCAAACTGCTGCTGCAGGTGGCCACAGAGACTTCCAGCGAGGGTGATGAAATGGGCATGTCGTTTGGCTCCAAGCTGAAGGACTGCAGACACCTGCTGGAGAGTGCCAAAGAGCAGGGCCTGCAGGTGGTGGGGGTCAGGTTCCACATTCCCAGCTCCTGTGACGACCCTCAGGCCTACAGCCATGCAGTGTCTGACGCTCGCTGTGTCTTTGACATGGGGGAGGATATTGGCTTCAGTATGACAATCCTGGATATTGGAGGTGGATTCAACGGCTCAGAGACTCAGCTGAAACAGATTAACAGTGCAGTCAGGCCGTTGTTGGACCTGTACTTCCCTGCATCGTCTGGCGTCTCCATCATGGCAGAGCCTGGCAGTTACTACGTGTCCTCCTCCTTCACCCTGGCTGTCAACATCATCGCTAAGGAAGTAGGCGCCCGGGATCTTCATGGCAATCTCAATGAACCATCTCCCAACGATGAGCCAGAGTTCCTGTACTACATGAACGATGGGGTGTACGGCTCGTTcactagcaagctagcagacaATGTGATTCCAGCTCCGGCTCTGCCCAAGAGCGGTGTGTCTGAGGAACCGGTGTTTGCCAGCAGTCTGTGGGGTCCGTCGGGTGATGAGCTGGACCAGGTGGTGGATCAGTGTCTGCTGCCAGAGCTCAGTGTGGGAGACTGGCTGATCTTCAACAACGCTGGGGCCTATAGCCTGGGCCCTCCGTCCACTTTCACAGATTCACCCAGACCCCCCGTCTACTACACCATCTCTACTGGAGACTGgtTTGAGATGCAGGATGCTGGTATCACCCAGGACATCAGCATGAAGAACTTCTCTCTGGTCCCCTACTTCCTCCACTCCAGCCAATCAGATGAAGCCCTGTCGGTCCCAGCTTAGGCTAGCTGAACCAATCCCATGTCTCTGCTGTGCTGATCTCACCTGGTCAACATTCCAATGGGAGGAAAAGACTGAATGGTGCTTGCTGGCTAAAAGCTTTTTATTATTCATTTCATAAGGAATTGAGCTTTTTGGGGGGGTGACAAGccctatacagtatgttgttggCTCTCTCAAGGAATAGCACAGGTGTTCCTTCCTTTCCACATTCAGTAAAATAGTATGCAACAAAATGGATGAGTCTGTAGGGATGGAACTCCCACCTGTGTGGGTATCCCATGCGGTtacagtttacatacagtaaatacatacaaTGGAATTTAAAAGTTAATATTTGAAACATGTATTATATTGCCTATATGTCTCCTTTTGCCAGTCTTGTAAATTCAATTGTCTACCTACTCAAAGTGGAGCAGTTAACAAAACCTGATGTTTTAAAGCCATTTTTGGATGCTTTGCTAAAAGATATTTATGTCTATTTATGGTTTTGTTGGTTgtcgttttatttttttttctggtCCCCTGGCACTTATGATCAGTCAGTATTTAAAAGGCGGCCAATGATGCatccccctattccctatttagtgcaatacttttgaccagatccctatcTAGGGAatagtgtcatttgggatgcatataACAGTGCAGTGCCTCAGATGAAGGGGAACTCTATTTGATTCAAGCAATATGAGTACAGAATATCATTCACTTAACATCTCGTTGATAGGGAGCTTGTGCTCACACTAAATATAAACCGTCTTGAGACTATTATCATAATGCAACATTGAtgtttcatttgttttttaaatcccTCTTCCTTACAAGTCTCTGTGGAAAGAATTGTCCAACATCTGTGAATTGGTCTCCAGTTTTGTCTAAAGTAAATTAATATAAAAGCTCTCTGAATCATAA
>XM_021556573.2
TTCACAAACTCTCGGCAGACAAGGCTGAGGTTGTTAAAACACCTGCAATCTAATTTCACACTGTTGAACTTCAAGCATGTGTTGCCAGAATACAAGAGAGGAGTACCAGTGACAATTAGTGGACAACATTTACATTTATCGCGGTGCCATGGGAAAAAGCATGAAGACGTAACCAAGGTGTACAATTACTACCCAGAGGGCTTAGGGGCGGCTCTCCGCCGAGAGCCGTTCGACTTCAACGCTGAGCCACCTTGGGATCCTAGCTGATAGTGGGGGAGCTCCATCTCCTAACTCGTCCATTTTGCTGCATACTATCAAGGACCCCAGGGGCTCAGAGAGAGACCACTTCGCCCAGGGGCTCAGAGAGAGACCACTTCAGCCAGGGGCTCAAAGAGACCACTTCATACAGAGGATCAGAGAGAGACCACTTCACACAGGCATAATTCTTTATGACTGGCAGATTAGCAGACAACAGTTGAGATGAAGGGACTAGCTGACGAACCAAACTACTCCGTCGCCCTGCTGGAGGGAGCCACGGCCCTCAGCGATGTGGTTGAGAATCACATTTATGAACAAACACTGGCTGAGAAGAATGCGTTCTTCGTGGCAGACTTGGGGGTCCTTATGAGGCAACATGTTCGCTGGCGAACCCACATGCCCCAGATGCGTCCCTTCTACGCTGTCCAAGCCAACAGCAGCCTGGCTGTCATTGAGATCTTAGCTGCTCTCGGGACTGGCTTCATCTGCACCAGCAAGTATGAGTTGGAGCTTGTGCAGGGCTATGGCGTTCCCTCTGAAGACATTATCTACAGCGGTGTGTGTAAACAACTCTCCCAGATCAAGTATGCCGCTAAGAACGGCATCGACTTCCTGGTGTGTGACAACGAGGCAGAGCTACGCAAGATCGCTCGCTGCCATCCCTGTGCCAAACTGCTGCTGCAGGTGGCCACAGAGACTTCCAGCGAGGGTGATGAAATGGGCATGTCGTTTGGCTCCAAGCTGAAGGACTGCAGACACCTGCTGGAGAGTGCCAAAGAGCAGGGCCTGCAGGTGGTGGGGGTCAGGTTCCACATTCCCAGCTCCTGTGACGACCCTCAGGCCTACAGCCATGCAGTGTCTGACGCTCGCTGTGTCTTTGACATGGGGGAGGATATTGGCTTCAGTATGACAATCCTGGATATTGGAGGTGGATTCAACGGCTCAGAGACTCAGCTGAAACAGATTAACAGTGCAGTCAGGCCGTTGTTGGACCTGTACTTCCCTGCATCGTCTGGCGTCTCCATCATGGCAGAGCCTGGCAGTTACTACGTGTCCTCCTCCTTCACCCTGGCTGTCAACATCATCGCTAAGGAAGTAGGCGCCCGGGATCTTCATGGCAATCTCAATGAACCATCTCCCAACGATGAGCCAGAGTTCCTGTACTACATGAACGATGGGGTGTACGGCTCGTTcactagcaagctagcagacaATGTGATTCCAGCTCCGGCTCTGCCCAAGAGCGGTGTGTCTGAGGAACCGGTGTTTGCCAGCAGTCTGTGGGGTCCGTCGGGTGATGAGCTGGACCAGGTGGTGGATCAGTGTCTGCTGCCAGAGCTCAGTGTGGGAGACTGGCTGATCTTCAACAACGCTGGGGCCTATAGCCTGGGCCCTCCGTCCACTTTCACAGATTCACCCAGACCCCCCGTCTACTACACCATCTCTACTGGAGACTGgtTTGAGATGCAGGATGCTGGTATCACCCAGGACATCAGCATGAAGAACTTCTCTCTGGTCCCCTACTTCCTCCACTCCAGCCAATCAGATGAAGCCCTGTCGGTCCCAGCTTAG

Function

NR:

description
antizyme inhibitor 1-like

GO:

id name namespace
GO:0006596 polyamine biosynthetic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021556566.2 False 2787 mRNA 0.48 12 27308514 27316375
XM_021556573.2 True 1830 mRNA 0.54 12 27309432 27317719

Neighbor

gene id symbol gene type direction distance location
LOC110485245 ubr5 coding downstream 30356 27231538 ~ 27278158 (-)
LOC110485403 NA coding downstream 77386 27215972 ~ 27231128 (-)
LOC110485460 LOC106605533 coding downstream 93112 27203190 ~ 27215402 (-)
LOC110485234 LOC106605534 coding downstream 106261 27184510 ~ 27202253 (-)
LOC110485162 LOC106605541 coding downstream 391364 26911398 ~ 26917150 (-)
LOC110533720 LOC106605543 coding upstream 63622 27381341 ~ 27385479 (-)
LOC110485571 oxr1 coding upstream 101927 27419646 ~ 27633110 (-)
LOC110485644 LOC106579058 coding upstream 360589 27678308 ~ 27825113 (-)
LOC110534585 LOC106605382 coding upstream 609945 27927664 ~ 27931710 (-)
LOC110485663 LOC106579570 coding upstream 615670 27933389 ~ 28149986 (-)
G127945 NA non-coding downstream 15190 27290244 ~ 27293324 (-)
G127607 NA non-coding downstream 167794 27140502 ~ 27140720 (-)
G127596 NA non-coding downstream 177621 27130539 ~ 27130893 (-)
G127579 NA non-coding downstream 189841 27118446 ~ 27118673 (-)
G127905 LOC106579140 non-coding upstream 3755 27321474 ~ 27331163 (-)
G127991 NA non-coding upstream 50172 27367891 ~ 27369610 (-)
G128001 NA non-coding upstream 71869 27389588 ~ 27389825 (-)
G128003 NA non-coding upstream 73150 27390869 ~ 27392647 (-)
G128027 NA non-coding upstream 154279 27471998 ~ 27472270 (-)
LOC110539285 LOC106579350 other downstream 645500 26641958 ~ 26675649 (-)
G127083 NA other downstream 746387 26561614 ~ 26562127 (-)
G125305 NA other downstream 2531887 24775220 ~ 24776627 (-)
LOC110538887 LOC106605647 other downstream 2773985 24531424 ~ 24540898 (-)
G129250 NA other upstream 448438 27766157 ~ 27766532 (-)
G129582 NA other upstream 992600 28310319 ~ 28310732 (-)
LOC110534614 LOC106605399 other upstream 1159467 28475823 ~ 28533709 (-)
LOC110486376 LOC106605451 other upstream 2551327 29859575 ~ 29878744 (-)

Expression


Co-expression Network