LOC110485869 (LOC106605412)


Basic Information

Item Value
gene id LOC110485869
gene name LOC106605412
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28703683 ~ 28706157 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557072.2
ATCTGTTGGAGAAAAAAAACCTGCAGATATAGGTTCCCTTGCTCTTGACCTTGTTAAGAGTCACTACAGCCCCCAGAACTACTGTCACACCAGAGTGTCACACCCAGAGAGACAACTCAACCCAGTTTGACAggATGAATATCACTGGATATCCTGTTCACACCACGGCAGGGGGGAACACCACAACCATTCCCTTCAGCTCTGTGAGTGTTGAGAATGGGAATTCATCCAGTTACTCATATGAGAACTCATCCAGTTATGCATATGAGAACTCATCCAGTTATGCATATGAGAACTCATCCAGTTATGCATATGAGAACTCATCCAGTTATGCATATGGCACACATTTTGCAGACACATTTGAAGTAACCACATACGACTATGGTGACTATGACGATGGCGTTTGCAAGTACAAGCCATACGGAGCCAACTTCCTGCCAGTGCTGTACTCTCTCTTCTTCATCCTGGGGTTTCTGGGGAACGTTCTGGTCCTGTGGGTCATCCTGCAGGGGGTGAAACTACGCAACATGACCGACGTGTGTCTCCTGAACCTGGCCTTGGCAGACCTGCTCCTGGTCTGCACCTTGCCTTTCCTGGCACACCACGCTACAGATCAGTGGGTGTTTGGTGACGTCATGTGCAAAGTGGTCCTCGGCGCCTACCACATTGGCTTCTACAGTGGCATCTTCTTCATCACCCTGATGAGTGTGGACAGGTACCTGGCCATAGTCCATGCTGTGTACGCCATGAGAGCTAGAACACGGAAGTACGGGGCCATCGCTGCCGTCGTGACCTGGCTGGCTGGATTCCTGGCCTCGTTTCCTGAGGCACTGTTTCTTAAAGTGGAGAAACACAACGAGAAAGAAAATTGTCGCCCTGTCTATGATGACAGGGCTTTGGTAATTTTTGGCCTTTTCAAAATGAACACACTTGGTCTGCTAATCCCCCTCGTCATCATGGGGTTCTGCTACACACAGATAGTGAGAAGGCTGCTCAGTCGCCCATCCTCCAAAAAGCAGGCCATCAGACTCATTCTCATTGTGGTTGTGGTGTTTTTCTGCTGCTGGACTCCGTACAACATGACGTCATTTTTCAAGGCCTTGGAGTTAAGTGAGGTCTACTCAAGCTGTGAGAGTAGCAAAGCCATCAGACTCACTCTACAGATCACAGAGGCCATGGCCTACTCCCATAGCTGCCTGAATCCCATCCTCTATGTGTTTCTGGGGCAGAAGTTTAGAAGGCATCTCATAAGACTGATTAACAAGGTTCCCTGCAGAATGTGTCAGTTCATGAAGAACTACCTGCCCCTGGACTTCAGAGCCTCGAGGACAGGATCTGTCTACTCACAGACCACCAGCGTGGATGAGAGGTCTACTGCCGTGTGAACAGCAACTTAACTGCAAAGACAAATACATCTAACATCACATATACTGTTCATTCCAAAACATATGTAAATACCAAATCCAGTTTCAAATGCAATCATCCGAAAATAATAGGCTCTGATCCAGGTGCATGGCAAAGTCAGGAAATTGTCACTCATCTCAGAGTTTCACACCAGAGGGTTGATTTTTACAGAAATCAACCCAATCAATATAAATTCCACAAACCATTTCATTTCCCTTTGTATAGTATTTTCTCTAGTACAGTACATCTATTTGAATATGTTTAGCACATTTTGCAAAGTCATAATTTTCTTATAAAATGTATTGTAAATCTGCTAGCACACGTTTACAATGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557072.2 True 1737 mRNA 0.46 4 28703683 28706157

Neighbor

gene id symbol gene type direction distance location
LOC110534614 LOC106605399 coding downstream 169974 28475823 ~ 28533709 (-)
LOC110485830 LOC106605406 coding downstream 232189 28468401 ~ 28471494 (-)
g6f-like-a g6f-like-a coding downstream 302154 28377818 ~ 28401529 (-)
LOC110485762 LOC106605404 coding downstream 330139 28356399 ~ 28373544 (-)
LOC110485793 LOC106605408 coding downstream 374487 28318045 ~ 28329196 (-)
LOC110485879 LOC106605413 coding upstream 706 28706863 ~ 28714039 (-)
LOC110485888 LOC106579893 coding upstream 9235 28715392 ~ 28718511 (-)
LOC110485998 LOC106605419 coding upstream 271672 28977829 ~ 29007911 (-)
trnat-ugu-28 NA coding upstream 305563 29011720 ~ 29011792 (-)
LOC110486042 LOC106605424 coding upstream 381260 29087417 ~ 29090611 (-)
G129784 NA non-coding downstream 7682 28695765 ~ 28696001 (-)
G129778 NA non-coding downstream 13604 28689778 ~ 28690079 (-)
G129777 NA non-coding downstream 14033 28689184 ~ 28689650 (-)
G129776 LOC106579830 non-coding downstream 16073 28684374 ~ 28687610 (-)
G129773 LOC106579830 non-coding downstream 26190 28676025 ~ 28677493 (-)
G129799 NA non-coding upstream 15050 28721207 ~ 28721896 (-)
G129894 LOC106605415 non-coding upstream 149024 28855181 ~ 28860491 (-)
G129896 NA non-coding upstream 154677 28860834 ~ 28865634 (-)
G129904 LOC106605416 non-coding upstream 167335 28873492 ~ 28875218 (-)
G129907 NA non-coding upstream 171233 28877390 ~ 28888656 (-)
G129582 NA other downstream 392951 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 553697 27933389 ~ 28149986 (-)
G129250 NA other downstream 937151 27766157 ~ 27766532 (-)
LOC110485245 ubr5 other downstream 1425559 27231538 ~ 27278158 (-)
LOC110486376 LOC106605451 other upstream 1162889 29859575 ~ 29878744 (-)
c2h8orf37 cssa05h8orf37 other upstream 2183536 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 2190869 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 2486262 31192419 ~ 31196292 (-)
LOC110486868 LOC106605361 other upstream 2490916 31196917 ~ 31199241 (-)

Expression


Co-expression Network