Gene
RNA
| Item | Value |
|---|---|
| gene id | trnat-ugu-28 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 29011720 ~ 29011792 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnat-ugu-28 | True | 73 | mRNA | 0.55 | 1 | 29011720 | 29011792 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485998 | LOC106605419 | coding | downstream | 3809 | 28977829 ~ 29007911 (-) |
| LOC110485888 | LOC106579893 | coding | downstream | 293209 | 28715392 ~ 28718511 (-) |
| LOC110485879 | LOC106605413 | coding | downstream | 297681 | 28706863 ~ 28714039 (-) |
| LOC110485869 | LOC106605412 | coding | downstream | 305563 | 28703683 ~ 28706157 (-) |
| LOC110534614 | LOC106605399 | coding | downstream | 478011 | 28475823 ~ 28533709 (-) |
| LOC110486042 | LOC106605424 | coding | upstream | 75625 | 29087417 ~ 29090611 (-) |
| LOC110486122 | LOC106605427 | coding | upstream | 449152 | 29460944 ~ 29470038 (-) |
| hjv | LOC106605430 | coding | upstream | 466902 | 29478694 ~ 29489250 (-) |
| LOC110486192 | LOC106605431 | coding | upstream | 485075 | 29496867 ~ 29512154 (-) |
| mtx1a | mtx1 | coding | upstream | 511680 | 29523472 ~ 29540845 (-) |
| G129882 | NA | non-coding | downstream | 75642 | 28904041 ~ 28936078 (-) |
| G129907 | NA | non-coding | downstream | 123064 | 28877390 ~ 28888656 (-) |
| G129904 | LOC106605416 | non-coding | downstream | 136502 | 28873492 ~ 28875218 (-) |
| G129896 | NA | non-coding | downstream | 146086 | 28860834 ~ 28865634 (-) |
| G129894 | LOC106605415 | non-coding | downstream | 151229 | 28855181 ~ 28860491 (-) |
| G130025 | NA | non-coding | upstream | 106095 | 29117887 ~ 29185848 (-) |
| G130027 | NA | non-coding | upstream | 138511 | 29150303 ~ 29172644 (-) |
| G130028 | stea4 | non-coding | upstream | 148922 | 29160714 ~ 29196616 (-) |
| G130158 | NA | non-coding | upstream | 336416 | 29348208 ~ 29348648 (-) |
| G130174 | NA | non-coding | upstream | 361367 | 29373159 ~ 29373728 (-) |
| G129582 | NA | other | downstream | 700988 | 28310319 ~ 28310732 (-) |
| LOC110485663 | LOC106579570 | other | downstream | 861734 | 27933389 ~ 28149986 (-) |
| G129250 | NA | other | downstream | 1245188 | 27766157 ~ 27766532 (-) |
| LOC110485245 | ubr5 | other | downstream | 1733596 | 27231538 ~ 27278158 (-) |
| LOC110486376 | LOC106605451 | other | upstream | 857254 | 29859575 ~ 29878744 (-) |
| c2h8orf37 | cssa05h8orf37 | other | upstream | 1877901 | 30889693 ~ 30896340 (-) |
| trnae-cuc | LOC106605367 | other | upstream | 1885234 | 30897026 ~ 30899564 (-) |
| LOC110486852 | LOC106605360 | other | upstream | 2180627 | 31192419 ~ 31196292 (-) |
| LOC110486868 | LOC106605361 | other | upstream | 2185281 | 31196917 ~ 31199241 (-) |
