trnat-ugu-29


Basic Information

Item Value
gene id trnat-ugu-29
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29021419 ~ 29021491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-ugu-29
GGCTCCATAGCTCAGTGGTTAGAGCACTGGTCTTGTAAACCAGGGGTCGTGAGTTCAATTCTCGCTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-ugu-29 True 73 mRNA 0.55 1 29021419 29021491

Neighbor

gene id symbol gene type direction distance location
LOC110485990 LOC106579931 coding upstream 70184 28931988 ~ 28951235 (+)
LOC110485980 LOC106605417 coding upstream 90318 28914821 ~ 28931101 (+)
LOC110485968 LOC106605416 coding upstream 115873 28867302 ~ 28905546 (+)
LOC110485935 LOC106605415 coding upstream 156108 28783574 ~ 28865311 (+)
LOC110485894 LOC106605414 coding upstream 240872 28719936 ~ 28780547 (+)
LOC110486009 LOC106605422 coding downstream 17437 29038928 ~ 29054543 (+)
LOC110486020 LOC106605423 coding downstream 39097 29060588 ~ 29081536 (+)
LOC110486049 stea4 coding downstream 129386 29150877 ~ 29161809 (+)
LOC110486065 NA coding downstream 143307 29164798 ~ 29171119 (+)
LOC100136336 stea4 coding downstream 150607 29172098 ~ 29196640 (+)
G128813 NA non-coding upstream 169610 28851577 ~ 28851809 (+)
G128638 NA non-coding upstream 247837 28768219 ~ 28773582 (+)
G128760 LOC106579893 non-coding upstream 302684 28712992 ~ 28718735 (+)
G128747 NA non-coding upstream 327452 28693692 ~ 28693967 (+)
G129093 NA non-coding downstream 333981 29355472 ~ 29356526 (+)
G129099 NA non-coding downstream 345483 29366974 ~ 29367331 (+)
G129149 NA non-coding downstream 451791 29473282 ~ 29473490 (+)
G129151 NA non-coding downstream 452762 29474253 ~ 29474520 (+)
G129153 NA non-coding downstream 454281 29475772 ~ 29475990 (+)
G128853 LOC106605419 other upstream 40131 28939899 ~ 28981288 (+)
G128490 NA other upstream 473504 28250842 ~ 28547915 (+)
G128436 NA other upstream 931974 28088647 ~ 28089445 (+)
G128185 NA other upstream 1304256 27716482 ~ 27717163 (+)
LOC110534631 LOC106580029 other downstream 456126 29424822 ~ 29478401 (+)
G129155 NA other downstream 463142 29484633 ~ 29485130 (+)
G130308 NA other downstream 578535 29600026 ~ 29641096 (+)
LOC110486279 LOC106605442 other downstream 664476 29685855 ~ 29697686 (+)
G130414 NA other downstream 768085 29789576 ~ 29789831 (+)

Expression


Co-expression Network