LOC110486049 (stea4)


Basic Information

Item Value
gene id LOC110486049
gene name stea4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29150877 ~ 29161809 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557368.2
aagcaaaaacACACCGCTCCTCTTCCAACAAAGTTTCCAGCTTGGCAGAGAGACTAATCCCTTCCCTCCTCAGACCAGGAGCGCAGACACAAATAGAGACTCAGTCTGTAgtatctcagtcagtcagtcaggacttTAATCTGGATAACTCAGAGGATCTGCTCCAACTCTGAATACTATTGTTTTGGGACATGTAATGCAGAAAACATTTCATTGCAGGATTTCAACTACAGTAAGCTGTCCTAGCATTGATTGACAGTGCTCTGTCTGGACAGTACTGTAACTCCATCTAGAGGTGTCTGCTGAAGAACTTAGCGAAGTTCCTGCGAGCTCCATTTATGTGAATGTACTTTTTCTGTGATTGAAACTTCAGGAAGGCATGACGGGtcaggagaggagtgaggagaagagtGAGTGTGTGTCCCTGTCTCCGATGATGGAGGCTGTCCCTGCCCCACCTGAgagtgagagggtgtgtgtgtttgggacgGGGGACCTGGGGCGCTCTCTGGGCCTGCGTCTGCTGCAGGCGGGGTACGGTGTGGTGTTCGGCAGCCGACGCCCCCACAGCCGCAGCAGCCTCCTACCCCACGGAGCACAGGTCCTGGGTCATGCTGCAGCTGCTCAGTCAGCCCATCTGATCTTCATCGCTGTCCAGAGAGAACACTACGACTTCCTGGTACCACTGGCCAATCAGCTGAAGGGAAAGGTGTTGGTGGACCTCAGTAACAACCTGAGGAAGAATCAGTACCCAGAGGCCAACGCAGAGTACCTGCAAAGTCTGGTTCCTGGAGCTGAGGTGGTTAAAGGCTTCAACACCCTGTCGGCCTGGAGTCTGCAGAATGGACCTTCAGATGCCAACAGACAGGTGTATATCTGCGGGGAAAGTGTGGAGGCCAAGCAGGCAGTGATAGCGGTAGCCACCAAGCTGGGTTTCAGTGCCCTGGACCAGGGATTTCTCTCAGTGGCCCGGGAGCTGGAGGACTTCCCCCTACAGCTGTTCCCCCAGTGGAGGCTCCCCCTGCGCATCTCCATTGGCCTCAGTGCTGCCTTCTTCTTCTACCTACTGATCAGATACGTCATCTATGCATACGTCACCCAGGGCGAAGACATCTCCTTCAGAATCATGGTCTCACTGGCCAACCAGgTGTGTCCCATCGTGTCTCTGATCATGCTGTCTCTCTGTTACCTGCCTGGTGTCCTGGCTTCCTTCCTGCAGCTCTACAGAGGCACCAAGTACAGGCGCTTCCCTAATTGGCTGGATCGCTGGATGCTGTGCAGGAAACAACTGGGTCTACTGTCGTTGGGGTTCGCCTTTCTGCACGTGCTCTATACACTGATCATACCCATACGGTACTCTGTGATGTTCTGGGTCACtgaacacactgtctctgtgATCAGAGAGAACAGGACCACAATGTTTGATACTACAACAGCTTGGCATGACGACTCCTACTTGTCCCTGGGAATTCTGGGATTTGGCCTGTACGTCCTATTGGGAATCACATCTCTTCCCTCCGTCATTAACGCTCTCAGCTGGAGGGAGTTCAGCTTCGTACAGTCCAAGCTGGGTCACCTGACTCTGCTGTTGTGTACGGCGCACACCTACCTGTACGGCTGGAACAGATTCCTGAGTTCCTCCACCTACAAGTGGTACACCCCACCGGGCTACATGCTGTGTCTGGTGCTTCCCTCTGTGGTGCTGCTACTCAAGCTGCTGCTCATAACCCCCTGTGTGGACCGAACCATCACCCGCATACGACAGGGCTGGGAGAGGGGGGCAGATCAGAGGAACCCTAAAGACAGCCAACCACTGATACcttagaggacacacacacacacacacacacacacacaaaataacaccCTCAGTGTGATGACAGCTTTGTCTTTGAGGCATGAACTCTTGTTTCTTTGCTATTGTACCCTCAGAGGTTGGCTACCATTCAAtcatcgtttgccatgtttctgggATCAAAAACCAACAATAACATTTAATTGATATGCAGTCGTATTTATTTTTATATGACACTGtaaacattgttgcatttaatGCATATATTTTCAACCGTATGTTAACCAGACATGAGTTTTCTCTCTTACGTAAAGAGAATGGTGAAAGCTCTTTCTCTCTTATATCCTCTCTCTTACTGTACATCCTCTCTCTTCTTTGACTGACTGTACAGTTATCCCCGGATGAAACACAGGTTTCAGAGACatataaatgtttttaaatgtatattttgtgTCTGTCTCATACATCTCCAGGGGCAGGTCAGACACATAAAAACACATCTATCAGTGTGATCCTCTCTGGGGCAGAGTGTTATTATTTCCTCCAGAAAACAGACTCTCTGAAACCCAGCAACAGGCTTCCCTTTCATCACTAGATAGACAGAGTGGCCCACAGTGTCTTCTGTTATGGGGAGCACTTCCATTTGTTCTGGATATAGCTGGTTGTTTGTGTAGATGCCAAATACCTAAATACATAGATTAACTTTTAGGTGCACGCAGAAAGACATATTCCCAGAAACAGCTTGTACCAACATTAAAAATACAGGAAcaatgtggaaacaatgttgattcaaccagtgtctGACAAGTGGGATCTTTTGtaataattatttttatttcatcaataaaataaatgggTATATATTT

Function

NR:

description
metalloreductase STEAP4-like

GO: NA

KEGG:

id description
K19876 STEAP4; metalloreductase STEAP4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557368.2 True 2661 mRNA 0.49 11 29150877 29161809

Neighbor

gene id symbol gene type direction distance location
LOC110486020 LOC106605423 coding upstream 69341 29060588 ~ 29081536 (+)
LOC110486009 LOC106605422 coding upstream 96334 29038928 ~ 29054543 (+)
trnat-ugu-29 NA coding upstream 129386 29021419 ~ 29021491 (+)
LOC110485990 LOC106579931 coding upstream 199642 28931988 ~ 28951235 (+)
LOC110485980 LOC106605417 coding upstream 219776 28914821 ~ 28931101 (+)
LOC110486065 NA coding downstream 2989 29164798 ~ 29171119 (+)
LOC100136336 stea4 coding downstream 10289 29172098 ~ 29196640 (+)
LOC118937130 NA coding downstream 69769 29231578 ~ 29232721 (+)
LOC110486083 LOC106605428 coding downstream 208026 29369835 ~ 29418297 (+)
LOC110534631 LOC106580029 coding downstream 263013 29424822 ~ 29478401 (+)
LOC110485935 LOC106605415 non-coding upstream 285702 28783574 ~ 28865311 (+)
G128813 NA non-coding upstream 299068 28851577 ~ 28851809 (+)
G128638 NA non-coding upstream 377295 28768219 ~ 28773582 (+)
G128760 LOC106579893 non-coding upstream 432142 28712992 ~ 28718735 (+)
G128747 NA non-coding upstream 456910 28693692 ~ 28693967 (+)
G129093 NA non-coding downstream 193663 29355472 ~ 29356526 (+)
G129099 NA non-coding downstream 205165 29366974 ~ 29367331 (+)
G129149 NA non-coding downstream 311473 29473282 ~ 29473490 (+)
G129151 NA non-coding downstream 312444 29474253 ~ 29474520 (+)
G129153 NA non-coding downstream 313963 29475772 ~ 29475990 (+)
G128853 LOC106605419 other upstream 169589 28939899 ~ 28981288 (+)
G128490 NA other upstream 602962 28250842 ~ 28547915 (+)
G128436 NA other upstream 1061432 28088647 ~ 28089445 (+)
G128185 NA other upstream 1433714 27716482 ~ 27717163 (+)
G129155 NA other downstream 322824 29484633 ~ 29485130 (+)
G130308 NA other downstream 438217 29600026 ~ 29641096 (+)
LOC110486279 LOC106605442 other downstream 524158 29685855 ~ 29697686 (+)
G130414 NA other downstream 627767 29789576 ~ 29789831 (+)

Expression


Co-expression Network