LOC100136336 (stea4)


Basic Information

Item Value
gene id LOC100136336
gene name stea4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29172098 ~ 29196640 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036944551.1
CCATGGGCTttcctgcccacacacacacacacacacaaacaagcaaaaCCCCTCCAACGGAATTTCCACCTTGGCAGAGAGACTactccctttcctcctccctccaggaGCACGCCCAGACACAAATAGAGATTCAGTCAGTCGTGTCTAGAGGTGTCTGCTATAGAACTTCGCGAAGTGAAAGGGACGTTCATCCTGCGAGCTCCATTTATGTGAATATACTTTTTCTGTGATTGAAACTTCAGGAAGGTATTTTAAACTCTTTGGTCTTTTTGACACTTTCTGTTGATTCTATCTACGACTCAAGGAGGTCTTTGCCTGTCTCTGTTCAGGCATGACGGGtcaggagaggagtgaggagaagagtGAGTGTGTGTCCCTGTCTCCGATGATGGAGGCTGTCCCTGCCCCACCTGAgagtgagagggtgtgtgtgtttgggacgGGGGACCTGGGGCGCTCTCTGGGCCTGCGTCTGCTGCAGGCGGGGTACGGTGTGGTGTTCGGCAGCCGACGCCCCCACAGCCGCAGCAGCCTCCTACCCCACGGAGCACAGGTCCTGGGTCATGCTGCAGCTGCTCAGTCAGCCCATCTGATCTTCATCGCTGTCCAGAGAGAACACTACGACTTCCTGGTACCACTGGCCAATCAGCTGAAGGGAAAGGTGTTGGTGGACCTCAGTAACAACCTGAGGAAGAATCAGTACCCAGAGGCCAACGCAGAGTACCTGCAAAGTCTGGTTCCTGGAGCTGAGGTGGTTAAAGGCTTCAACACCTTGTCTGCCTGGAGTCTGCAGAATGGACCTTCAGATGCCAACAGACAGGTGTATATCTGCGGGGAAAGTGTGGAGGCCAAGCAGGCGGTGATAGCGGTAGCCATCAAGCTGGGTTTCAGTGCCCTGGACCGGGGATTTCTCTCAGTGGCCCGGGAGCTGGAGGACTTCCCCCTACAGCTGTTCCCCCAGTGGAGGCTCCCCCTGCGCATCGCCATTGGCCTCAGTGCTGCCTTCTTCTTCTACCTGCTGATCAGAGACATCATCTATGCATACGTCACCCAGAGCAAAGACATCTCCTTCAGAATCATGGTCTCACTGGCCAACAAGGTGTGTCCTATCGTGTCTCTGATCATGCTGTCTCTCTGTTACCTGCCTGGTGTCCTGGCTTCCTTCCTGCAGCTCTACAGAGGCACCAAGTACAGGCGCTTCCCTGATTGGCTGGACCGCTGGATGCTGTGCAGGAAACAACTGGGTCTTCTGGCACTGGGGTTCGCCTTTCTGCACGTGCTCTATACACTGATCATACCCATACGGTACTATGTGAGGTTCAAGGCCACTGAACGCACTGTCTCTGTGatcagAGAGAACAGGACCACTGAGTTTGACACGACGACGGCCTGGCGTGGTGACTCCTACTTATCCCTGGGGATTCTGGGATTTGGCCTGTACGTTCTGTTAGGAATCACATCTCTTCCCTCCGTCAGTAACGCTCTCAGCTGGAGGGAGTTCAGCTTCATACAGTCCAAGCTGGGTCACCTGACTCTGCTGTTTTGTACGGCGCACACCTACCTGTACGGCTGGAACAGATTCCTGAGTTCCTCCACCTACAAGTGGTACACCCCACCGGGCTACATGCTGTGTCTGGTGCTTCCCTCTGTGGTGCTGCTACTCAAGCTGCTGCTCATAACCCCCTGTGTGGACCGAACCATCACCCGCATACGACAGGGCTGGGAGAGGGGGGCAGATCAGAGGAACCCTAAAGACAGCCAACCACTGATACcttagaggacacacacacacacacacacacacaataacacccTCAGTGTGATGACAGCTTTGTCTTTGAGGCATGAACTCTAATTTCTTTGCTATTGTACCCTCAGAGGTTGGCTACCATTCAAtcatcgtttgccatgtttctgggATCAAAACCCAACAATAACATTTAATTGATATGCAGTcgtatttatttttatattacaCTGTAAACATTGTAGCATTTTAATACATATATTTTCAACAGTACACAAACCAGACACTAGTTTTCACTGGTGAAagctctctctatcactctctcataTTCTCTCTTACTGTACATCCTCTCTCTTCTTTGACTGACTGTACAGTTATCCCCGGATGAAACACAGGTTTCAGAGACATATAAACgtttttaaatgta
>XM_021557405.2
ATGGGCTttcctgcccacacacacacacacacacaaacaagcaaaaCCCCTCCAACGGAATTTCCACCTTGGCAGAGAGACTactccctttcctcctccctccaggaGCACGCCCAGACACAAATAGAGATTCAGTCAGTCGTGTCTAGAGGTGTCTGCTATAGAACTTCGCGAAGTGAAAGGGACGTTCATCCTGCGAGCTCCATTTATGTGAATATACTTTTTCTGTGATTGAAACTTCAGGAAGGCATGACGGGtcaggagaggagtgaggagaagagtGAGTGTGTGTCCCTGTCTCCGATGATGGAGGCTGTCCCTGCCCCACCTGAgagtgagagggtgtgtgtgtttgggacgGGGGACCTGGGGCGCTCTCTGGGCCTGCGTCTGCTGCAGGCGGGGTACGGTGTGGTGTTCGGCAGCCGACGCCCCCACAGCCGCAGCAGCCTCCTACCCCACGGAGCACAGGTCCTGGGTCATGCTGCAGCTGCTCAGTCAGCCCATCTGATCTTCATCGCTGTCCAGAGAGAACACTACGACTTCCTGGTACCACTGGCCAATCAGCTGAAGGGAAAGGTGTTGGTGGACCTCAGTAACAACCTGAGGAAGAATCAGTACCCAGAGGCCAACGCAGAGTACCTGCAAAGTCTGGTTCCTGGAGCTGAGGTGGTTAAAGGCTTCAACACCTTGTCTGCCTGGAGTCTGCAGAATGGACCTTCAGATGCCAACAGACAGGTGTATATCTGCGGGGAAAGTGTGGAGGCCAAGCAGGCGGTGATAGCGGTAGCCATCAAGCTGGGTTTCAGTGCCCTGGACCGGGGATTTCTCTCAGTGGCCCGGGAGCTGGAGGACTTCCCCCTACAGCTGTTCCCCCAGTGGAGGCTCCCCCTGCGCATCGCCATTGGCCTCAGTGCTGCCTTCTTCTTCTACCTGCTGATCAGAGACATCATCTATGCATACGTCACCCAGAGCAAAGACATCTCCTTCAGAATCATGGTCTCACTGGCCAACAAGGTGTGTCCTATCGTGTCTCTGATCATGCTGTCTCTCTGTTACCTGCCTGGTGTCCTGGCTTCCTTCCTGCAGCTCTACAGAGGCACCAAGTACAGGCGCTTCCCTGATTGGCTGGACCGCTGGATGCTGTGCAGGAAACAACTGGGTCTTCTGGCACTGGGGTTCGCCTTTCTGCACGTGCTCTATACACTGATCATACCCATACGGTACTATGTGAGGTTCAAGGCCACTGAACGCACTGTCTCTGTGatcagAGAGAACAGGACCACTGAGTTTGACACGACGACGGCCTGGCGTGGTGACTCCTACTTATCCCTGGGGATTCTGGGATTTGGCCTGTACGTTCTGTTAGGAATCACATCTCTTCCCTCCGTCAGTAACGCTCTCAGCTGGAGGGAGTTCAGCTTCATACAGTCCAAGCTGGGTCACCTGACTCTGCTGTTTTGTACGGCGCACACCTACCTGTACGGCTGGAACAGATTCCTGAGTTCCTCCACCTACAAGTGGTACACCCCACCGGGCTACATGCTGTGTCTGGTGCTTCCCTCTGTGGTGCTGCTACTCAAGCTGCTGCTCATAACCCCCTGTGTGGACCGAACCATCACCCGCATACGACAGGGCTGGGAGAGGGGGGCAGATCAGAGGAACCCTAAAGACAGCCAACCACTGATACcttagaggacacacacacacacacacacacacaataacacccTCAGTGTGATGACAGCTTTGTCTTTGAGGCATGAACTCTAATTTCTTTGCTATTGTACCCTCAGAGGTTGGCTACCATTCAAtcatcgtttgccatgtttctgggATCAAAACCCAACAATAACATTTAATTGATATGCAGTcgtatttatttttatattacaCTGTAAACATTGTAGCATTTTAATACATATATTTTCAACAGTACACAAACCAGACACTAGTTTTCACTGGTGAAagctctctctatcactctctcataTTCTCTCTTACTGTACATCCTCTCTCTTCTTTGACTGACTGTACAGTTATCCCCGGATGAAACACAGGTTTCAGAGACATATAAACgtttttaaatgta
>XM_021557416.2
tgcccacacacacacacacacacaaacaagcaaaaCCCCTCCAACGGAATTTCCACCTTGGCAGAGAGACTactccctttcctcctccctccaggaGCACGCCCAGACACAAATAGAGATTCAGTCAGTCGTGTCTAGAGGTGTCTGCTATAGAACTTCGCGAAGTGAAAGGGACGTTCATCCTGCGAGCTCCATTTATGCATGACGGGtcaggagaggagtgaggagaagagtGAGTGTGTGTCCCTGTCTCCGATGATGGAGGCTGTCCCTGCCCCACCTGAgagtgagagggtgtgtgtgtttgggacgGGGGACCTGGGGCGCTCTCTGGGCCTGCGTCTGCTGCAGGCGGGGTACGGTGTGGTGTTCGGCAGCCGACGCCCCCACAGCCGCAGCAGCCTCCTACCCCACGGAGCACAGGTCCTGGGTCATGCTGCAGCTGCTCAGTCAGCCCATCTGATCTTCATCGCTGTCCAGAGAGAACACTACGACTTCCTGGTACCACTGGCCAATCAGCTGAAGGGAAAGGTGTTGGTGGACCTCAGTAACAACCTGAGGAAGAATCAGTACCCAGAGGCCAACGCAGAGTACCTGCAAAGTCTGGTTCCTGGAGCTGAGGTGGTTAAAGGCTTCAACACCTTGTCTGCCTGGAGTCTGCAGAATGGACCTTCAGATGCCAACAGACAGGTGTATATCTGCGGGGAAAGTGTGGAGGCCAAGCAGGCGGTGATAGCGGTAGCCATCAAGCTGGGTTTCAGTGCCCTGGACCGGGGATTTCTCTCAGTGGCCCGGGAGCTGGAGGACTTCCCCCTACAGCTGTTCCCCCAGTGGAGGCTCCCCCTGCGCATCGCCATTGGCCTCAGTGCTGCCTTCTTCTTCTACCTGCTGATCAGAGACATCATCTATGCATACGTCACCCAGAGCAAAGACATCTCCTTCAGAATCATGGTCTCACTGGCCAACAAGGTGTGTCCTATCGTGTCTCTGATCATGCTGTCTCTCTGTTACCTGCCTGGTGTCCTGGCTTCCTTCCTGCAGCTCTACAGAGGCACCAAGTACAGGCGCTTCCCTGATTGGCTGGACCGCTGGATGCTGTGCAGGAAACAACTGGGTCTTCTGGCACTGGGGTTCGCCTTTCTGCACGTGCTCTATACACTGATCATACCCATACGGTACTATGTGAGGTTCAAGGCCACTGAACGCACTGTCTCTGTGatcagAGAGAACAGGACCACTGAGTTTGACACGACGACGGCCTGGCGTGGTGACTCCTACTTATCCCTGGGGATTCTGGGATTTGGCCTGTACGTTCTGTTAGGAATCACATCTCTTCCCTCCGTCAGTAACGCTCTCAGCTGGAGGGAGTTCAGCTTCATACAGTCCAAGCTGGGTCACCTGACTCTGCTGTTTTGTACGGCGCACACCTACCTGTACGGCTGGAACAGATTCCTGAGTTCCTCCACCTACAAGTGGTACACCCCACCGGGCTACATGCTGTGTCTGGTGCTTCCCTCTGTGGTGCTGCTACTCAAGCTGCTGCTCATAACCCCCTGTGTGGACCGAACCATCACCCGCATACGACAGGGCTGGGAGAGGGGGGCAGATCAGAGGAACCCTAAAGACAGCCAACCACTGATACcttagaggacacacacacacacacacacacacaataacacccTCAGTGTGATGACAGCTTTGTCTTTGAGGCATGAACTCTAATTTCTTTGCTATTGTACCCTCAGAGGTTGGCTACCATTCAAtcatcgtttgccatgtttctgggATCAAAACCCAACAATAACATTTAATTGATATGCAGTcgtatttatttttatattacaCTGTAAACATTGTAGCATTTTAATACATATATTTTCAACAGTACACAAACCAGACACTAGTTTTCACTGGTGAAagctctctctatcactctctcataTTCTCTCTTACTGTACATCCTCTCTCTTCTTTGACTGACTGTACAGTTATCCCCGGATGAAACACAGGTTTCAGAGACATATAAACgtttttaaatgta

Function

NR:

description
metalloreductase STEAP4

GO: NA

KEGG:

id description
K19876 STEAP4; metalloreductase STEAP4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036944551.1 False 2177 mRNA 0.51 10 29172098 29196640
XM_021557405.2 False 2092 mRNA 0.52 11 29172100 29196640
XM_021557416.2 True 2044 mRNA 0.52 11 29172111 29196640

Neighbor

gene id symbol gene type direction distance location
LOC110486065 NA coding upstream 979 29164798 ~ 29171119 (+)
LOC110486049 stea4 coding upstream 10289 29150877 ~ 29161809 (+)
LOC110486020 LOC106605423 coding upstream 90562 29060588 ~ 29081536 (+)
LOC110486009 LOC106605422 coding upstream 117555 29038928 ~ 29054543 (+)
trnat-ugu-29 NA coding upstream 150607 29021419 ~ 29021491 (+)
LOC118937130 NA coding downstream 34938 29231578 ~ 29232721 (+)
LOC110486083 LOC106605428 coding downstream 173195 29369835 ~ 29418297 (+)
LOC110534631 LOC106580029 coding downstream 228182 29424822 ~ 29478401 (+)
LOC110486208 NA coding downstream 348604 29545045 ~ 29553946 (+)
LOC118944146 NA coding downstream 397524 29594164 ~ 29594216 (+)
LOC110485935 LOC106605415 non-coding upstream 306923 28783574 ~ 28865311 (+)
G128813 NA non-coding upstream 320289 28851577 ~ 28851809 (+)
G128638 NA non-coding upstream 398516 28768219 ~ 28773582 (+)
G128760 LOC106579893 non-coding upstream 453363 28712992 ~ 28718735 (+)
G128747 NA non-coding upstream 478131 28693692 ~ 28693967 (+)
G129093 NA non-coding downstream 158832 29355472 ~ 29356526 (+)
G129099 NA non-coding downstream 170334 29366974 ~ 29367331 (+)
G129149 NA non-coding downstream 276642 29473282 ~ 29473490 (+)
G129151 NA non-coding downstream 277613 29474253 ~ 29474520 (+)
G129153 NA non-coding downstream 279132 29475772 ~ 29475990 (+)
G128853 LOC106605419 other upstream 190810 28939899 ~ 28981288 (+)
LOC110485990 LOC106579931 other upstream 227708 28931988 ~ 28951235 (+)
G128490 NA other upstream 624183 28250842 ~ 28547915 (+)
G128436 NA other upstream 1082653 28088647 ~ 28089445 (+)
G128185 NA other upstream 1454935 27716482 ~ 27717163 (+)
G129155 NA other downstream 287993 29484633 ~ 29485130 (+)
G130308 NA other downstream 403386 29600026 ~ 29641096 (+)
LOC110486279 LOC106605442 other downstream 489327 29685855 ~ 29697686 (+)
G130414 NA other downstream 592936 29789576 ~ 29789831 (+)

Expression


Co-expression Network