mtx1a (mtx1)


Basic Information

Item Value
gene id mtx1a
gene name mtx1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29523472 ~ 29540845 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557628.2
GTCAGTGGCAACGAGAGGTATCACTTCCGAGTGAAAGGTCGTTCAATTATTTCAAGATGGCTGTCTCCTCGCAGATGGCAACCTCTGAGCTGTACTGCTGGGAAGGCGACTGGGGTTTACCGTCTGTCGACACTGAGTGTTTAATTGTATTGGCTTATGCAAAGTTTGCAGGCGCACCCCTCAAACTTCACAAGATCGGCAACCCCTGGAGAAGTCCCACTGGCTCCCTGCCTGCCCTGAAGACCAGCGAGAATGGGAGCCTGTCTCGGCCCAGTGACATCATCATCCACCTCAGGAAACAGAAATACAATGCCGACTTCGACCTGTCTGCCAAAGAGGGAGCAGACACTCTGGCCTTCATCTCACTCCTGGAGGAAAAACTGATGCCAGCTCTGGTCTATACTCGGTGGATTGACCCTAAGAACTATGTGGAGGTGACTCGGCGTTGGCACGCGGAGCACGCCCCATTCCCCCTGAACTTCTTCCTGCCCGGCAGCATTCAGCGCCAGCAGCTCCAGAGGCTGAGGCTGGTCAGGGGAGACGAAGAGTTGACAgcaggggaggaggtggagaaggagCTGTACCGCGATGCTATGGAGTGTATGAACCTTATCTCGCAGAGGCTGGGCTCAAACAAGTTCTTCTTTGGAGACTCACCTTCATCTCTAGATGCTTTCGTCTTTGGCTACTTGGTGCCCATCCTGAAGATGAAACTGCCCAATGGAAGACTCCAGCAGCACCTCAAGTCACTGGACAACCTGAGCCACTTCTGCTCCAACATTCTGGCGCTCTACTTCCCCAGCGAGGGACGAGAAGGTATCAGTCGCAAGGTGTCTTCCCAGCCTGAAGGGGGTGACGCTGACAATGAGCCTGGTAAGAGGCGCAAGCAGCTGCTGTCAGTCCTAGTGGCCCTGGGCGCCATGTTGAGCTACGCCCTCCTCACCGGCATTGTGGCTATTCAACACGTCCAGCAGGAGGCACTAGACCACCGTTCCCCAGGTctcaggtcactctcctcccacggggaagaggaggatggggaggaggagggctgaggatggggaggaggagacggCCGCAACTCAAAActgatctcctgtctctattccTAATTCTTCGTTGACGCTCCCTCATCAGTCTGGAATGACTGGAAAGGTGTTAACCAATATGGCAGAAACTCCAGTTAGCCTTCTAGACTAGGTGGAACGTTTACTCTACTGCTGATGCCTCAACAATCCCTTCAGATCCTGGAGGAGGAGTCAATAGGAAGAAGGGGCAAGGGGTTGGTGTTTGATTGGGCCAAAGCCGTAGAGTAcgatgaagaggaggagcagCACTGTGGGAATATACATTAAGATGCTTCAACATGTACCAAGAGTGCTTCAATGTCTTACTTGGAGAATGTTTGGATGTTTTCTCTGCTTTATTTTGACTGCCATTGCATGATAATCATAGATCCAAATCATGACGTCGCTTTGCTTTTCTCAATTTCCTGGTGCTTTATCTAATCCAACTGATTATACTTTCGTGTGTAAATTATATTATTGAGGGAACAAATCCCAGGTAGCATTTGTGAAAATTGAAATGTTACTGAATTCTTAGTAGCGTTAGCACATTCTTTCTGAACACTTGCCAAGATGACCACAATCTCCACCACAGTAAACAGTGTGTGAGGTCTCTAGatgtttaataataataatttcaacAGAGGAAATAAAGGGGTGACTTCTTGGTTTATATTATTTTCATATTATTGCTTGTCAGGCTGAGAACTGTTTTATAATTTTTCACCTACCATGAATTTGAGGGCCAAGCCTGAAGTTTGGGGCATTTAAATGTTTCTGGGCCGATTCAAAATCTTGTGGAAATTGCCCTCCCCGGTGCAATTTGTGCTCAAACAACGTATGCATAATGTGTGCTGTAGTGAAGACTGTGCTGGCCCTATTCCTGCATTGCAGCAAGTCAAAGCATCATTCAATACAAGAAACAGCGAAGTTCAATAAATCACTTTAATTTTCCTATA
>XM_036944748.1
GTCAGTGGCAACGAGAGGTATCACTTCCGAGTGAAAGGTCGTTCAATTATTTCAAGATGGCTGTCTCCTCGCAGATGGCAACCTCTGAGCTGTACTGCTGGGAAGGCGACTGGGGTTTACCGTCTGTCGACACTGAGTGTTTAATTGTATTGGCTTATGCAAAGTTTGCAGGCGCACCCCTCAAACTTCACAAGATCGGCAACCCCTGGAGAAGTCCCACTGGCTCCCTGCCTGCCCTGAAGACCAGCGAGAATGGGAGCCTGTCTCGGCCCAGTGACATCATCATCCACCTCAGGAAACAGAAATACAATGCCGACTTCGACCTGTCTGCCAAAGAGGGAGCAGACACTCTGGCCTTCATCTCACTCCTGGAGGAAAAACTGATGCCAGCTCTGGTCTATACTCGGTGGATTGACCCTAAGAACTATGTGGAGGTGACTCGGCGTTGGCACGCGGAGCACGCCCCATTCCCCCTGAACTTCTTCCTGCCCGGCAGCATTCAGCGCCAGCAGCTCCAGAGGCTGAGGCTGGTCAGGGGAGACGAAGAGTTGACAgcaggggaggaggtggagaaggagCTGTACCGCGATGCTATGGAGTGTATGAACCTTATCTCGCAGAGGCTGGGCTCAAACAAGTTCTTCTTTGGAGACTCACCTTCATCTCTAGATGCTTTCGTCTTTGGCTACTTGGTGCCCATCCTGAAGATGAAACTGCCCAATGGAAGACTCCAGCAGCACCTCAAGTCACTGGACAACCTGAGCCACTTCTGCTCCAACATTCTGGCGCTCTACTTCCCCAGCGAGGGACGAGGTATCAGTCGCAAGGTGTCTTCCCAGCCTGAAGGGGGTGACGCTGACAATGAGCCTGGTAAGAGGCGCAAGCAGCTGCTGTCAGTCCTAGTGGCCCTGGGCGCCATGTTGAGCTACGCCCTCCTCACCGGCATTGTGGCTATTCAACACGTCCAGCAGGAGGCACTAGACCACCGTTCCCCAGGTctcaggtcactctcctcccacggggaagaggaggatggggaggaggagggctgaggatggggaggaggagacggCCGCAACTCAAAActgatctcctgtctctattccTAATTCTTCGTTGACGCTCCCTCATCAGTCTGGAATGACTGGAAAGGTGTTAACCAATATGGCAGAAACTCCAGTTAGCCTTCTAGACTAGGTGGAACGTTTACTCTACTGCTGATGCCTCAACAATCCCTTCAGATCCTGGAGGAGGAGTCAATAGGAAGAAGGGGCAAGGGGTTGGTGTTTGATTGGGCCAAAGCCGTAGAGTAcgatgaagaggaggagcagCACTGTGGGAATATACATTAAGATGCTTCAACATGTACCAAGAGTGCTTCAATGTCTTACTTGGAGAATGTTTGGATGTTTTCTCTGCTTTATTTTGACTGCCATTGCATGATAATCATAGATCCAAATCATGACGTCGCTTTGCTTTTCTCAATTTCCTGGTGCTTTATCTAATCCAACTGATTATACTTTCGTGTGTAAATTATATTATTGAGGGAACAAATCCCAGGTAGCATTTGTGAAAATTGAAATGTTACTGAATTCTTAGTAGCGTTAGCACATTCTTTCTGAACACTTGCCAAGATGACCACAATCTCCACCACAGTAAACAGTGTGTGAGGTCTCTAGatgtttaataataataatttcaacAGAGGAAATAAAGGGGTGACTTCTTGGTTTATATTATTTTCATATTATTGCTTGTCAGGCTGAGAACTGTTTTATAATTTTTCACCTACCATGAATTTGAGGGCCAAGCCTGAAGTTTGGGGCATTTAAATGTTTCTGGGCCGATTCAAAATCTTGTGGAAATTGCCCTCCCCGGTGCAATTTGTGCTCAAACAACGTATGCATAATGTGTGCTGTAGTGAAGACTGTGCTGGCCCTATTCCTGCATTGCAGCAAGTCAAAGCATCATTCAATACAAGAAACAGCGAAGTTCAATAAATCACTTTAATTTTCCTATA

Function

symbol description
mtx1 Predicted to be involved in mitochondrion organization. Part of MIB complex and SAM complex.

NR:

description
PREDICTED: metaxin-1 isoform X1

GO:

id name namespace
GO:0006626 protein targeting to mitochondrion biological_process
GO:0005741 mitochondrial outer membrane cellular_component

KEGG:

id description
K17776 MTX; metaxin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557628.2 False 2023 mRNA 0.49 8 29523472 29540845
XM_036944748.1 True 2020 mRNA 0.49 8 29523472 29540845

Neighbor

gene id symbol gene type direction distance location
LOC110486192 LOC106605431 coding downstream 11318 29496867 ~ 29512154 (-)
hjv LOC106605430 coding downstream 34222 29478694 ~ 29489250 (-)
LOC110486122 LOC106605427 coding downstream 53434 29460944 ~ 29470038 (-)
LOC110486042 LOC106605424 coding downstream 432861 29087417 ~ 29090611 (-)
trnat-ugu-28 NA coding downstream 511680 29011720 ~ 29011792 (-)
LOC110533728 LOC106605434 coding upstream 2204 29543049 ~ 29544879 (-)
LOC110486216 LOC106605435 coding upstream 16458 29557303 ~ 29570811 (-)
si:dkey-7j14.6 LOC106605437 coding upstream 30867 29571712 ~ 29575352 (-)
LOC110486243 LOC106605438 coding upstream 39007 29579852 ~ 29599325 (-)
LOC110486252 LOC106605439 coding upstream 62404 29603249 ~ 29639641 (-)
G130254 NA non-coding downstream 28549 29494577 ~ 29494923 (-)
G130252 NA non-coding downstream 30097 29493082 ~ 29493375 (-)
G130245 NA non-coding downstream 44841 29478427 ~ 29478631 (-)
G130244 NA non-coding downstream 45255 29477444 ~ 29478217 (-)
G130558 NA non-coding upstream 8118 29548963 ~ 29549162 (-)
G130536 NA non-coding upstream 13645 29554490 ~ 29554966 (-)
G130563 NA non-coding upstream 24116 29564961 ~ 29565292 (-)
G130564 NA non-coding upstream 24963 29565808 ~ 29566032 (-)
G130565 NA non-coding upstream 25262 29566107 ~ 29566318 (-)
LOC110534614 LOC106605399 other downstream 1045641 28475823 ~ 28533709 (-)
G129582 NA other downstream 1212740 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 1373486 27933389 ~ 28149986 (-)
G129250 NA other downstream 1756940 27766157 ~ 27766532 (-)
LOC110485245 ubr5 other downstream 2245348 27231538 ~ 27278158 (-)
LOC110486376 LOC106605451 other upstream 328201 29859575 ~ 29878744 (-)
c2h8orf37 cssa05h8orf37 other upstream 1348848 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 1356181 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 1651574 31192419 ~ 31196292 (-)
LOC110486868 LOC106605361 other upstream 1656228 31196917 ~ 31199241 (-)

Expression


Co-expression Network