si:dkey-7j14.6 (LOC106605437)


Basic Information

Item Value
gene id si:dkey-7j14.6
gene name LOC106605437
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29571712 ~ 29575352 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557674.2
GACTGAAGTCGAATATTTCCGAGTTTCCAATTGTTTTGAACGCGTTATAAATGAAAATAGCAGACGCAACAGGGATCTGTAAACGTTGAAGAAGTATCCTAGATTATATCCTTGTATTTCCGTGTTTGTACGTTAGCTGTTCCCGCACCTGGAAAAAGTGGACAAGTGGTGTTTGTTGTCGTCAACCACCCAAATAAGGATCATCAACCATGTCCACCTCTATCACAACTGCAAATGGAGTTGTGGTAGTGACACAAGTGTTCCCCTTGGTGGAGAGTGGCAAGGCTTCAGAGCCACTTCTGAATGTCACTCCCCAAATCCAGAGTGCGCCCCTCGGTGTGCCACTGCCTACCACTAAAGTGTCAGAGATGACAAGGGTGTTCCTGCAGCTTCAGCCACAATCTCTTGGGATTGTGCAGATCATCCTTGGATTGGTGTGCATGGTGATGAGCCTGtctgctcttctctcccctaTCCTGTATGACCAGTTCCCACTCTTCATGGGAGTTGCTTTTGTCCTCTCTGGATCTCTCACTGTGGCTGCCCGGAAAGGAACAAGTTTGAGTCTGATTAAAGGGACTCTGGCTGTGAATGTCGTCAGTGTTCTTGTGGCTCTGGCTGGGGTTGCCTATATTTGCATGCTGCTGACTGTAAAACATGAAGATGGTTTCTGCATCGAAACTGATGACAACTATACTTCCAATTCCAACCAGAACAGGATACAGGAATGCACACGTATGGTTAGGACAATATATACAGTCTTGAATGGGGTAAAGGGCCTAATGCTGGTCCTGACGGTGATGGAGCTCTGTGTGGCTCTCACTGTCTGCGTCTTCTCTGGGAAAGTCATTCACCTCCATGGGTACTACAGCCTGAGCCGTGGCCGGGGGATGGTGGTTGTAGAGACTGGTACTGACCCCACCGGAGCCAGCCAGGCCTCCCTGAGTGACAGTGATGTGGCCTTACTGGGCAGTGTTGAGGATTCTGACACCCCGGCTCCACCATACTCTCCTTGAGGCAGAACCATGCCATACACCTCACCCTACTTCTTACAACACATATTGCATTGTAGTATACCCTATGTACTCATGTGTTTCTCTTGTTTGAATTCGTTATTTCACAATTGCTTACCTAAACTGTGCATGAAGATTATCATTAGGAAGTGTGACACGCTGCGAATGTGTCTGATTGTTTTGTCATCAATGTGAGCAGTCGTGTCCTGGTGATCCTTCTGTCCTGATGAATGTATTGCTCTGTAGTGGTTCCTAATATATCAAGTAGGACTGTTATTCTCTTTGCTATTTCATATTACTGTAGAGTTAATATCTTGATTTCTGACAGTGTATCATTCTTTCATTCAATAAATTGAATATTTCCTCTTCAA
>XM_021557682.2
TCCAATTGTTTTGAACGCGTTATAAATGAAAATAGCAGACGCAACAGGGATCTGTAAACGTTGAAGAAGTATCCTAGATTATATCCTTGTATTTCCGTGTTTGTACGTTAGCTGTTCCCGCACCTGGAAAAAGTGGACAAGTGTTTGTTTTCTTCTCAGGTGTTTGTTGTCGTCAACCACCCAAATAAGGATCATCAACCATGTCCACCTCTATCACAACTGCAAATGGAGTTGTGGTAGTGACACAAGTGTTCCCCTTGGTGGAGAGTGGCAAGGCTTCAGAGCCACTTCTGAATGTCACTCCCCAAATCCAGAGTGCGCCCCTCGGTGTGCCACTGCCTACCACTAAAGTGTCAGAGATGACAAGGGTGTTCCTGCAGCTTCAGCCACAATCTCTTGGGATTGTGCAGATCATCCTTGGATTGGTGTGCATGGTGATGAGCCTGtctgctcttctctcccctaTCCTGTATGACCAGTTCCCACTCTTCATGGGAGTTGCTTTTGTCCTCTCTGGATCTCTCACTGTGGCTGCCCGGAAAGGAACAAGTTTGAGTCTGATTAAAGGGACTCTGGCTGTGAATGTCGTCAGTGTTCTTGTGGCTCTGGCTGGGGTTGCCTATATTTGCATGCTGCTGACTGTAAAACATGAAGATGGTTTCTGCATCGAAACTGATGACAACTATACTTCCAATTCCAACCAGAACAGGATACAGGAATGCACACGTATGGTTAGGACAATATATACAGTCTTGAATGGGGTAAAGGGCCTAATGCTGGTCCTGACGGTGATGGAGCTCTGTGTGGCTCTCACTGTCTGCGTCTTCTCTGGGAAAGTCATTCACCTCCATGGGTACTACAGCCTGAGCCGTGGCCGGGGGATGGTGGTTGTAGAGACTGGTACTGACCCCACCGGAGCCAGCCAGGCCTCCCTGAGTGACAGTGATGTGGCCTTACTGGGCAGTGTTGAGGATTCTGACACCCCGGCTCCACCATACTCTCCTTGAGGCAGAACCATGCCATACACCTCACCCTACTTCTTACAACACATATTGCATTGTAGTATACCCTATGTACTCATGTGTTTCTCTTGTTTGAATTCGTTATTTCACAATTGCTTACCTAAACTGTGCATGAAGATTATCATTAGGAAGTGTGACACGCTGCGAATGTGTCTGATTGTTTTGTCATCAATGTGAGCAGTCGTGTCCTGGTGATCCTTCTGTCCTGATGAATGTATTGCTCTGTAGTGGTTCCTAATATATCAAGTAGGACTGTTATTCTCTTTGCTATTTCATATTACTGTAGAGTTAATATCTTGATTTCTGACAGTGTATCATTCTTTCATTCAATAAATTGAATATTT

Function

NR:

description
membrane-spanning 4-domains subfamily A member 4A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557674.2 False 1384 mRNA 0.46 7 29571712 29575352
XM_021557682.2 True 1366 mRNA 0.46 7 29571721 29575327

Neighbor

gene id symbol gene type direction distance location
LOC110486216 LOC106605435 coding downstream 901 29557303 ~ 29570811 (-)
LOC110533728 LOC106605434 coding downstream 26833 29543049 ~ 29544879 (-)
mtx1a mtx1 coding downstream 30867 29523472 ~ 29540845 (-)
LOC110486192 LOC106605431 coding downstream 59558 29496867 ~ 29512154 (-)
hjv LOC106605430 coding downstream 82462 29478694 ~ 29489250 (-)
LOC110486243 LOC106605438 coding upstream 4500 29579852 ~ 29599325 (-)
LOC110486252 LOC106605439 coding upstream 27897 29603249 ~ 29639641 (-)
plin6 NA coding upstream 123307 29698659 ~ 29707941 (-)
LOC118938819 LOC106580151 coding upstream 132758 29708110 ~ 29709648 (-)
LOC110486325 LOC106605445 coding upstream 156566 29731918 ~ 29741258 (-)
G130567 NA non-coding downstream 2729 29568651 ~ 29568983 (-)
G130565 NA non-coding downstream 5394 29566107 ~ 29566318 (-)
G130564 NA non-coding downstream 5680 29565808 ~ 29566032 (-)
G130563 NA non-coding downstream 6420 29564961 ~ 29565292 (-)
G130657 NA non-coding upstream 187019 29762371 ~ 29770692 (-)
G130671 NA non-coding upstream 214302 29789654 ~ 29789873 (-)
G130673 NA non-coding upstream 216612 29791964 ~ 29792173 (-)
G130674 NA non-coding upstream 217449 29792801 ~ 29793179 (-)
G130675 NA non-coding upstream 219000 29794352 ~ 29794580 (-)
LOC110534614 LOC106605399 other downstream 1093881 28475823 ~ 28533709 (-)
G129582 NA other downstream 1260980 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 1421726 27933389 ~ 28149986 (-)
G129250 NA other downstream 1805180 27766157 ~ 27766532 (-)
LOC110485245 ubr5 other downstream 2293588 27231538 ~ 27278158 (-)
LOC110486376 LOC106605451 other upstream 293694 29859575 ~ 29878744 (-)
c2h8orf37 cssa05h8orf37 other upstream 1314341 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 1321674 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 1617067 31192419 ~ 31196292 (-)
LOC110486868 LOC106605361 other upstream 1621721 31196917 ~ 31199241 (-)

Expression


Co-expression Network