plin6


Basic Information

Item Value
gene id plin6
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29698659 ~ 29707941 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557777.2
TCGTCAATAACTATGCTTGTATGGGCTTGGACCAGCTGGAAAAGAACTTTCCCGTCCTGCACCAGTCTACAGAGGAGGTATTGGGTCACCTGAAGGATGCCTTCTTTCTGACCCTGGATGACGTGCAACTGCGTGTGAATGATGAGCTGGACGGGATACAGGGGCGCTGGGACAAGCTGACCGATGCCACCTGGTACTACCTCCTGGCTCTGCAGGAGTCACAGCTGGGTCAGATAGCCACCTCGGGCCTGGATGACATCCTCACACGCTCAGAGGAGGCCATGGCCAAGTACATGCCCCTGACGGCTCCCCTGCGCctagagtgggagaggaggacacaGCAGTATGAGGATGAAGATGGGGAGGATGAGCCTGGGTTGTGGACGCGGTTCCGAGGCCTCCTGCTCTGTCTGAGCCTGCAGCTGTACCACCGCCTGCTGCAGCTCAGAAACAGGCTGGAGCAGGCCATGGGGATGCTACAGGATGCTACCGAAAGGATCGGCCTGAGCAGGTTGCTGGAGGTGGTAGGCTCTGTGCTCCAGAGACTACAGCTGCTCTACGTGTACCAGGTGTTGCGTCTAGACGTCGTGAGGAGGCTGGCCCTGGACCAGCTGAAGGCCCAGGTACGGGTCCTGGCTGAACTGGGGCCCGTCAAGCAGCTGTTGGGACTGCCTGCTCAGGTGCAGCTTGTGGTGGCTGACCTGCAGGAGCTGGGCAAGATCCTACTGCAGCTGCTGGTCAACAGCACCCCTCTCTACAACATGctcCAGCAGCCAAGTGATCAGGATGTGGAGGACTTCCTCAACCACCAGGAATCCATGTCCTCTGACACCACTCGCCGCAGTTCTGCCAATAGCCTCTTTCTCAAGGCCATGGACGGCCGCCCACACAAACGCACAAGCTCGTATGCCCGCTCTCAAAGGGGCTCAACCAGTGCCCCCAGTCCAGCCCCAGCCAAATCGCCCAACAGCAGCCATGGCAGCCAGAAGCCAGACGACCAGCCTCTCTCTTGCCTGGGCAGCCAGAAGCCAGATGACCAGCCTCTCTCTCGCCGGGGCAGCCAGATGCCAGAGGatcagcctctctctctggagCTAGATCCCCTGGAGCTCCCTTCTACAAGCACCGTGCTTCGCCCCTCCTCGGCTGCCGAAGTCCTCCTTGGCTCCATCCTCCAGTACCTGAGCTCTGAGCCACCCTCGGATGAGACCATTATACCCAAGGTGGAGACCACTGAGGACCTGAGCTCCAAGAAAGTCTCAGATGAGGCCATGGAGAGCACTGAGTACTACTCCGATGCAAGAGACGTGAGCCCATCCAGACGCAACAGCCTGTCTGCCCACTCCCACAGAAGCTCATCAAGTGCTGGTAACCCGGATGACCAGCCTCTCTCTCGCCGGGGCAGCCAGAAGCCAGATGACCAACCTCTCTCTCGCCGGGGCAGCCAGAAGCCAGACGGCCAGCCTCTTTTTCTGGAGCTGGACCCCCTAAAGCTTCATTCTACCAGCACTGTGAGTCACCCCTCCTTGGCTGCCGAGGTCCTTCTAGGTTCCATCCTCCAGTACATTAGCTCTGAGCCACCCTCAGACGAGCCTGTTGTACCCGAGGTGGAGACCACCAAGAACCACACAGAAGCCAGAGACGAGAGCCCACCCAGATGCAAGAGCCTGTCTGTTCGCTCCCGCAGAAGCTCATCAAGTGCTGGCAACCCATCAAACGTCCGCCAGGGCAGCCAGATGCGGAATGAAGAGCCTCTCTCTGTGGAGTTCAACATCCTGGAGGTCTCTTCTACCAGTGCTTTGCGCCGCCGATCCTTGGCTGCCGAGGTACTCCTTGGCCCCATCCTCCAGTACCTGAGCTCTGAACCATCCTCAGACGAGACCGTTATACCCGAGGTGGAGACCGCAGAGAAGAATTCACACACAAAGGATGAGAGCCCACCCAGACACCAGAGCATGTCTCCCCGCTCCCGCAGGAGCTCGTCCAGTGCTGTTGTGCCTGAGGTGGAGACTACTGAGTACTACTTTGACGAAGGAAACGGCAGCCCACTCAGACGCAAGAGCCTGTCAATCCGCTCCTGCAGGAGCTCATCCAGTGGAGGCAACGCCCCAGCCCCTGGGCTAACCCCAGACAACCCACACAATGACCGCCAGGGCAGCCAGATGCAGGACAGCCTGGAGAATGAAGAGCCTCTCTCTGTGGAGTTCAACACCCTGGCCTTCCCTTCTACCAGCACCATGCGTCGCCGCTCCTGGGCTGTCGAGGTCCTCCTAGACCCCATCCTGCAGTACCTGAACCCTGGGCATTCAGATAAGGCTGATATAGAAGAGGTCGAAATACCTGTGGTGGAGGCCACAGAGCACTAAGAAGTCACCAGTGTCCTAGAAATGGCCTCCCTTTGCAGGCCCAGGTGTAAGACTTATTAGTTGATTTTAGTTTGTGGGTACACATAGGGGGGGGCCATAGTTCAGCAGACATAATCTGTAATCGGTCCATTGGAATCCAAAATGTGTCAATGTATGTCACTGAAAGATTCAGGCGTTCTTCTTCATGTACAGACGCCAACCCACATTTGTTTTGGTTTCCTAACTGAGCATCATGTGACATTATACACCTTGCACCCCATTTATATATTAGACCTAACTATTCTTCAATGATGTGCTAACCTGATGTTGCATTCTGTTTTCTGTTACACTAAGTAGCTGTGAGAAACATAGCTTGTCATGATTAAAGGTAGAATATGGATTGGCCTAAATATGGATGATGGAAGGATGTTGAATGTGTTGATTGAGGAATGAGCATCAAATAGACAGTAGAAAATGTGTCTTTATTACAATGTCATAACATGTTATATTTCATAACATATATAATACATGACACGTTTAGATTGTCCTACAGTATGCATCAACATAATATTGGTTGTATTCAAGAAATAAATAACATTTGTATTGCTGCAGAGAAATGTATTGAGGTTATGAAGAGTGAAATAAAGTGCCATTTccccatctacagtacagtactcagCTCATACATGTACTTTCCCAgaataacacattcatgtttcATGCATTGTATGAAGGTGAACATTACAACATAACTTTTCCCAAATATTTATTTCACAGAAATTAAATCGTTTTATACACATTAGAGAGAAAATAGTAGACAGAATTCTCTCTCATATTAATATATTCATTTATTTACAATTCTCAAACAAACGTGTGCACAGCACAAATAAGTATCAAGTCTGCTAGACCAAGTCTGCTAGACCT
>XM_036944831.1
ttctgtcttttttgtgtctgcaccagacagaactttTGTTTGTTccgctttgttgtttttttgttctagtgttcagtttctttattaaatcTACCATGAACACGTACCCTGCTGCACCTAGggcctctccttccaacagccgttacagccagactacgATCGGCCTGAGCAGGTTGCTGGAGGTGGTAGGCTCTGTGCTCCAGAGACTACAGCTGCTCTACGTGTACCAGGTGTTGCGTCTAGACGTCGTGAGGAGGCTGGCCCTGGACCAGCTGAAGGCCCAGGTACGGGTCCTGGCTGAACTGGGGCCCGTCAAGCAGCTGTTGGGACTGCCTGCTCAGGTGCAGCTTGTGGTGGCTGACCTGCAGGAGCTGGGCAAGATCCTACTGCAGCTGCTGGTCAACAGCACCCCTCTCTACAACATGctcCAGCAGCCAAGTGATCAGGATGTGGAGGACTTCCTCAACCACCAGGAATCCATGTCCTCTGACACCACTCGCCGCAGTTCTGCCAATAGCCTCTTTCTCAAGGCCATGGACGGCCGCCCACACAAACGCACAAGCTCGTATGCCCGCTCTCAAAGGGGCTCAACCAGTGCCCCCAGTCCAGCCCCAGCCAAATCGCCCAACAGCAGCCATGGCAGCCAGAAGCCAGACGACCAGCCTCTCTCTTGCCTGGGCAGCCAGAAGCCAGATGACCAGCCTCTCTCTCGCCGGGGCAGCCAGATGCCAGAGGatcagcctctctctctggagCTAGATCCCCTGGAGCTCCCTTCTACAAGCACCGTGCTTCGCCCCTCCTCGGCTGCCGAAGTCCTCCTTGGCTCCATCCTCCAGTACCTGAGCTCTGAGCCACCCTCGGATGAGACCATTATACCCAAGGTGGAGACCACTGAGGACCTGAGCTCCAAGAAAGTCTCAGATGAGGCCATGGAGAGCACTGAGTACTACTCCGATGCAAGAGACGTGAGCCCATCCAGACGCAACAGCCTGTCTGCCCACTCCCACAGAAGCTCATCAAGTGCTGGTAACCCGGATGACCAGCCTCTCTCTCGCCGGGGCAGCCAGAAGCCAGATGACCAACCTCTCTCTCGCCGGGGCAGCCAGAAGCCAGACGGCCAGCCTCTTTTTCTGGAGCTGGACCCCCTAAAGCTTCATTCTACCAGCACTGTGAGTCACCCCTCCTTGGCTGCCGAGGTCCTTCTAGGTTCCATCCTCCAGTACATTAGCTCTGAGCCACCCTCAGACGAGCCTGTTGTACCCGAGGTGGAGACCACCAAGAACCACACAGAAGCCAGAGACGAGAGCCCACCCAGATGCAAGAGCCTGTCTGTTCGCTCCCGCAGAAGCTCATCAAGTGCTGGCAACCCATCAAACGTCCGCCAGGGCAGCCAGATGCGGAATGAAGAGCCTCTCTCTGTGGAGTTCAACATCCTGGAGGTCTCTTCTACCAGTGCTTTGCGCCGCCGATCCTTGGCTGCCGAGGTACTCCTTGGCCCCATCCTCCAGTACCTGAGCTCTGAACCATCCTCAGACGAGACCGTTATACCCGAGGTGGAGACCGCAGAGAAGAATTCACACACAAAGGATGAGAGCCCACCCAGACACCAGAGCATGTCTCCCCGCTCCCGCAGGAGCTCGTCCAGTGCTGTTGTGCCTGAGGTGGAGACTACTGAGTACTACTTTGACGAAGGAAACGGCAGCCCACTCAGACGCAAGAGCCTGTCAATCCGCTCCTGCAGGAGCTCATCCAGTGGAGGCAACGCCCCAGCCCCTGGGCTAACCCCAGACAACCCACACAATGACCGCCAGGGCAGCCAGATGCAGGACAGCCTGGAGAATGAAGAGCCTCTCTCTGTGGAGTTCAACACCCTGGCCTTCCCTTCTACCAGCACCATGCGTCGCCGCTCCTGGGCTGTCGAGGTCCTCCTAGACCCCATCCTGCAGTACCTGAACCCTGGGCATTCAGATAAGGCTGATATAGAAGAGGTCGAAATACCTGTGGTGGAGGCCACAGAGCACTAAGAAGTCACCAGTGTCCTAGAAATGGCCTCCCTTTGCAGGCCCAGGTGTAAGACTTATTAGTTGATTTTAGTTTGTGGGTACACATAGGGGGGGGCCATAGTTCAGCAGACATAATCTGTAATCGGTCCATTGGAATCCAAAATGTGTCAATGTATGTCACTGAAAGATTCAGGCGTTCTTCTTCATGTACAGACGCCAACCCACATTTGTTTTGGTTTCCTAACTGAGCATCATGTGACATTATACACCTTGCACCCCATTTATATATTAGACCTAACTATTCTTCAATGATGTGCTAACCTGATGTTGCATTCTGTTTTCTGTTACACTAAGTAGCTGTGAGAAACATAGCTTGTCATGATTAAAGGTAGAATATGGATTGGCCTAAATATGGATGATGGAAGGATGTTGAATGTGTTGATTGAGGAATGAGCATCAAATAGACAGTAGAAAATGTGTCTTTATTACAATGTCATAACATGTTATATTTCATAACATATATAATACATGACACGTTTAGATTGTCCTACAGTATGCATCAACATAATATTGGTTGTATTCAAGAAATAAATAACATTTGTATTGCTGCAGAGAAATGTATTGAGGTTATGAAGAGTGAAATAAAGTGCCATTTccccatctacagtacagtactcagCTCATACATGTACTTTCCCAgaataacacattcatgtttcATGCATTGTATGAAGGTGAACATTACAACATAACTTTTCCCAAATATTTATTTCACAGAAATTAAATCGTTTTATACACATTAGAGAGAAAATAGTAGACAGAATTCTCTCTCATATTAATATATTCATTTATTTACAATTCTCAAACAAACGTGTGCACAGCACAAATAAGTATCAAGTCTGCTAGACCAAGTCTGCTAGAC

Function

NR:

description
uncharacterized protein LOC110486293

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557777.2 False 3269 mRNA 0.52 5 29698659 29707941
XM_036944831.1 True 2928 mRNA 0.51 3 29698661 29702700

Neighbor

gene id symbol gene type direction distance location
LOC110486252 LOC106605439 coding downstream 59018 29603249 ~ 29639641 (-)
LOC110486243 LOC106605438 coding downstream 99334 29579852 ~ 29599325 (-)
si:dkey-7j14.6 LOC106605437 coding downstream 123307 29571712 ~ 29575352 (-)
LOC110486216 LOC106605435 coding downstream 127848 29557303 ~ 29570811 (-)
LOC110533728 LOC106605434 coding downstream 153780 29543049 ~ 29544879 (-)
LOC118938819 LOC106580151 coding upstream 169 29708110 ~ 29709648 (-)
LOC110486325 LOC106605445 coding upstream 23977 29731918 ~ 29741258 (-)
LOC101268921 LOC106605446 coding upstream 35133 29743074 ~ 29752178 (-)
polr3glb LOC106580193 coding upstream 97044 29804985 ~ 29812180 (-)
LOC110486376 LOC106605451 coding upstream 151634 29859575 ~ 29878744 (-)
G130567 NA non-coding downstream 129676 29568651 ~ 29568983 (-)
G130565 NA non-coding downstream 132341 29566107 ~ 29566318 (-)
G130564 NA non-coding downstream 132627 29565808 ~ 29566032 (-)
G130563 NA non-coding downstream 133367 29564961 ~ 29565292 (-)
G130657 NA non-coding upstream 54430 29762371 ~ 29770692 (-)
G130671 NA non-coding upstream 81713 29789654 ~ 29789873 (-)
G130673 NA non-coding upstream 84023 29791964 ~ 29792173 (-)
G130674 NA non-coding upstream 84860 29792801 ~ 29793179 (-)
G130675 NA non-coding upstream 86411 29794352 ~ 29794580 (-)
LOC110534614 LOC106605399 other downstream 1220828 28475823 ~ 28533709 (-)
G129582 NA other downstream 1387927 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 1548673 27933389 ~ 28149986 (-)
G129250 NA other downstream 1932127 27766157 ~ 27766532 (-)
LOC110485245 ubr5 other downstream 2420535 27231538 ~ 27278158 (-)
c2h8orf37 cssa05h8orf37 other upstream 1181752 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 1189085 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 1484478 31192419 ~ 31196292 (-)
LOC110486868 LOC106605361 other upstream 1489132 31196917 ~ 31199241 (-)

Expression


Co-expression Network