Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110486325 |
| gene name | LOC106605445 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 29731918 ~ 29741258 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| synaptotagmin-11-like |
| id | name | namespace |
|---|---|---|
| GO:0006810 | transport | biological_process |
| GO:0008021 | synaptic vesicle | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005215 | transporter activity | molecular_function |
| id | description |
|---|---|
| K19911 | SYT11; synaptotagmin-11 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021557839.2 | True | 1926 | mRNA | 0.54 | 4 | 29731918 | 29741258 |
29,720,000
29,722,000
29,724,000
29,726,000
29,728,000
29,730,000
29,732,000
29,734,000
29,736,000
29,738,000
29,740,000
29,742,000
NC_048566.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938819 | LOC106580151 | coding | downstream | 22270 | 29708110 ~ 29709648 (-) |
| plin6 | NA | coding | downstream | 23977 | 29698659 ~ 29707941 (-) |
| LOC110486252 | LOC106605439 | coding | downstream | 92277 | 29603249 ~ 29639641 (-) |
| LOC110486243 | LOC106605438 | coding | downstream | 132593 | 29579852 ~ 29599325 (-) |
| si:dkey-7j14.6 | LOC106605437 | coding | downstream | 156566 | 29571712 ~ 29575352 (-) |
| LOC101268921 | LOC106605446 | coding | upstream | 1816 | 29743074 ~ 29752178 (-) |
| polr3glb | LOC106580193 | coding | upstream | 63727 | 29804985 ~ 29812180 (-) |
| LOC110486376 | LOC106605451 | coding | upstream | 118317 | 29859575 ~ 29878744 (-) |
| iqgap3 | LOC106605450 | coding | upstream | 138967 | 29880225 ~ 29900765 (-) |
| LOC110534642 | LOC106605453 | coding | upstream | 219404 | 29960662 ~ 29986096 (-) |
| LOC110486216 | LOC106605435 | non-coding | downstream | 161143 | 29557303 ~ 29570811 (-) |
| G130567 | NA | non-coding | downstream | 162935 | 29568651 ~ 29568983 (-) |
| G130565 | NA | non-coding | downstream | 165600 | 29566107 ~ 29566318 (-) |
| G130564 | NA | non-coding | downstream | 165886 | 29565808 ~ 29566032 (-) |
| G130563 | NA | non-coding | downstream | 166626 | 29564961 ~ 29565292 (-) |
| G130657 | NA | non-coding | upstream | 21113 | 29762371 ~ 29770692 (-) |
| G130671 | NA | non-coding | upstream | 48396 | 29789654 ~ 29789873 (-) |
| G130673 | NA | non-coding | upstream | 50706 | 29791964 ~ 29792173 (-) |
| G130674 | NA | non-coding | upstream | 51543 | 29792801 ~ 29793179 (-) |
| G130675 | NA | non-coding | upstream | 53094 | 29794352 ~ 29794580 (-) |
| LOC110534614 | LOC106605399 | other | downstream | 1254087 | 28475823 ~ 28533709 (-) |
| G129582 | NA | other | downstream | 1421186 | 28310319 ~ 28310732 (-) |
| LOC110485663 | LOC106579570 | other | downstream | 1581932 | 27933389 ~ 28149986 (-) |
| G129250 | NA | other | downstream | 1965386 | 27766157 ~ 27766532 (-) |
| LOC110485245 | ubr5 | other | downstream | 2453794 | 27231538 ~ 27278158 (-) |
| c2h8orf37 | cssa05h8orf37 | other | upstream | 1148435 | 30889693 ~ 30896340 (-) |
| trnae-cuc | LOC106605367 | other | upstream | 1155768 | 30897026 ~ 30899564 (-) |
| LOC110486852 | LOC106605360 | other | upstream | 1451161 | 31192419 ~ 31196292 (-) |
| LOC110486868 | LOC106605361 | other | upstream | 1455815 | 31196917 ~ 31199241 (-) |
