LOC110486473 (LOC106605459)


Basic Information

Item Value
gene id LOC110486473
gene name LOC106605459
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30115535 ~ 30168611 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945018.1
ttccaGTGGAAACGAAAGCCTACCCCTGTGCCGGAGTAAGACGGCGCCAcgagatgaacacacacactttcatacaAGCACAGACACACTGTTCCAGCGTCAGGCAGTCAGTCTCTACTCGGACTGGCCAAGGCTGCCTCAGGCTATCCAGCGCAACActgaaatagacagacagagtaCAAGGAATACTGTCATGAaaccagacatacacacacaaacaataggGGGTCACAAACACGGATCTACAGCTGTGTGAGGAGCCGAACACACCCTCAGACCAGACGAAGGGAagcagagtgtgtgtgcgcgtgtttctTTGACCCGTGGCTGTAGAGGATTTTCCTGGTGTGTAACGGCACACTACTTTTGTCATCTCGCTTTCTCTACCTGATGCGGTGGGATTTCCTGACCCTGGAGTTCAACAGCTGACCCACGCAGGCCTAGAATCAGCTTCCCTGAGTTGGAAACCTGCTACACAGCTAAAGGTGCTGAGCAGTGCTGGTACTTTGATAGCCTTTCCTTGGACTATTTTCTAATTCAGGCAAAAAGTTACACCTTCTCATGCTACAACTATGAAACAACAGGCACATTTTCTGCAGAGATAGGCTACTTTGTCTGACACAGCAAATAACCGACTGTCATGGCTTAGCCTAAAATAATTTAATCGGGAAAGCCAACGTCAACTTTGTCCAGTCTGTTTTCTTTGGTAATAAGAGGTGGGAGCTAGTACCTCTCAAATTACTGACTGTGGCTGTACATTCATTCTGTTGATTTTCCAAATTGATTTGTTTCTTATTTCTTTGGGCGCAACTAAAAGGAAAAACATAATTGACGTTTTTTTTGGTCGATATCCCCTGCTTTCGTGAACCACGCGTTGCCTTTTCGCGGGTTTCGCATGCCCATCAGTACCTCTGCCCACACAACTCGAGCCTCGCAGCTGATATTTCAcctcagtcactgacagtcacacgTGCCAAGACGTCGTAATAAACCAGAGTTTGACATGGAGGGAGAAAACTCAATTCAAGCTCTACAGGATAAATAATTCACAAGGACATTATTCAGCAGCCTAGCAGGATGAGGATGGAGGGAGTAAAACTGTTGCTGGTTCTTCTTCTGCTGCTGGGTGCCTGTCTCCAGTGGGTCCAGTCTGGCATGTCCTCCCGGCACCGTGATTCACACCGACGCCCCAGAGAGCACCGGGACCATCGGCAGCACGGGAACATCACGCTGGCCATCATCCTACCACAGAGAAACACTGCCTACCCCTGGGCCTGGCCCCGTGTGGGTCCGGCTCTGGACCGAGCCATCAACACCATCAACGCTGACCCAGCGCTCCTCCGCGGCCACCACCTGGGTTACGTGTTTGAGAACAGCGAGAACGAAGAAGGCATCTGCTCTGAGTCCATCGCCCCACTCATGGCTGTTGACCTCAAGTTCGCCCACGACCCTTGGGCTTTCATTGGGCCGGGCTGTGACTACACCTCCTCCCCAGTGGGCCTCTTCACCACCCACTGGGACATCCCCATGGTAACGGCGGGCGCCCCAGCCGTGGGCTTCAACGGCATCAACATGTACCCGTCCATCACCAACACGGGCCCCACGCACAAAAAGCTGGGCAAGTTCGGCCTCCATATCTGCAAGCACTTTGAGTGGAAGGAGCAGGTGCTGCTCATGTTCAGTGATAACAAGAAGGATGACCGGCCGTGCTACTTCGCTGTGGAGGGCCTCTACACAGAGCTACACTTGAACAACATCACCTCGGTGGACCTGGTGTTTGAGGAGAACACTGGACCTGTCAACTACTCTGACCTGCTCCACAACATCAAGCAAGATGGCCGAGTGGTGTTTGTGTGTTGCTCTCCGGACACGTTCAGGCAGCTGATGGTTCATTTCCAGCGGGCAGGCCTTCCTCAGGAGGAGTATGTTTTCTTCTACATTGACATGTTTGGACGCAGCCTGGACTCCCAGAATGCTCAACCCTGGGCCAGAGGGGACCAAGACGACCTTGTCGCCAAGGAGGCCTTCCAGAGTGTGAAAATCCTGACCTATAGAGAACCCCAGAACCCTGAATATAAAGATTTTGTGAGGGACCTGAAGACAGATGCCAAGAGAATGTTCAACTTTACGGTGGAGGACTCACTGATGAACATAATCTCTGGAGGGTTCTACGACGGGCTGATGCTGTACACCCATGCCCTGAACGAGACCATGACCTCGCCAGAGGACAGACCCGTGGGGAAAACCGTAACAAGGAGGATGTGGAACCGCACCTACAACGGTGTAACAGGCCTGGTGCAGATAGATGAGaatggggacagagagacagacttcGCTCTCTGGGACATGAATGACACCAACACCAGTGTTTTCCAGATTGTGTTGGTGTACAACGGCTCTCAGAAGAAGCTGAGGGCCTTGCCTGGGATGGACATCCAGTGGCCAGGGGGCGCTGCTCCTTTAGATGTGCCCGTCTGTGGCTTCAAGAACGACAACCCAGAATGCCTTGCACGAACCATCACAATCCACCAGATGGTAACAATTGTGGTGTtcttcatcattatcatcatcctcACCATTACTGTCTTCATATACAGGAAGCTGAAGCTTGAAAATGAGCTGGTGGCTCAGCTGTGGAGAGTCTCCTGGGAGGATATTCAGATGAGCAACATGGAGAAAGTGCTGCGAAGCGCAGGCAGCAAGCTCACTCTGTCCCTAAGGGGCTCCAACTACGGCTCCCTATTAACAGGAGATGGAAACTTTCAGGTGTTTGCCAAGACAGGCTATTACAAGGCAAATATTGTGGCCATCAAATACATCAACAGAAAACGCATTGAGCTCACCAGAAACGTGCTGTTTGAACTGAAACATATGCGTGATATTCAGAATGAGCACCTGACCCGCTTCATCGGAGCCTGCATCGATCCCCCCAACATCTGCATCATCACAGAGTACTGTCCTCGGGGTAGCCTACAGGACATCATGGAAAACGAGAGCATCACACTGGATTGGATGTTCAGATACTCTTTAATCAATGACATTGTCAAGGGCATGGCTTTCCTCCACAACAGTGTCATTGTCTCCCACGGCAACCTGAAGTCGTCCAACTGCGTGGTGGATAACCGCTTTGTGCTGAAGATCACCGACTACGGCCTGTCCAGCTTCCGCACCGAGAGCAACACAGATGACGCCCATGCTTACTATGCCCGGAAGCTGTGGATGGCCCCAGAGCTGCTGAGGTTGGAGAGACCCCCTCCATGTGGCACACAGAAGGGAGACGTCTACAGCTTTGGCATCATTCTCCAAGAGGTGGCGCTACGCCATGGAGCCTTCTATCTGGAGGGAGAGCCGCTCAGCCCcaaagAAATCATGGACCGGGTGGCTCTGGGTGAGTGGCCGTGCCTGCGGCCTGCTGTCAACCCTCAGATCCACAGCCAGGAGCTGGGCCAACTCATGCAGCGCTGCTGGGCAGAGGAGCCCACCGAGAGGCCCGAGTTCAACCACATCAAACTGCTGCTACGCAAACAGAACAGggagtgCAGCACTAACATCCTGGATAACCTGCTGTCCCGTATGGAGCAGTATGCTAACAACCTGGAGGAGCTGGTGGAGGAGAGAACCCAGGCCTACCACGAAGAGAAACGCAAGGCTGAGGCCCTGCTCTACCAGATACTACCACATTCAGTGGCGGAGCAGCTAAAGAGAGGGGAGACGGTACAGGCTGAGGCCTTTGATTCAGTCACCATCTACTTCAGTGACATTGTAGGCTTCACAGCCATATCAGCTGAGAGCACACCTATGCAGGTTGTGACCCTGCTCAATGACCTCTACACCTGTTTCGATGCCATCATTGACAACTTTGATGTTTACAAGGTGGAGACCATTGGTGATGCCTACATGGTGGTGTCCGGCCTGCCGGTGAGGAACGGGAAGCTACACGGCCGAGAGATCGCCCGCATGGCCCTGGCTCTGCTCAACGCCGTACGCACCTTCAAAATCCAACACCGACCCGACCAGCAGCTCAAACTACGCATTGGCATCCACAGCGGCCCTGTGTGTGCAGGAGTGGTGGGGCTGAAGATGCCACGGTACTGTCTGTTTGGAGACACAGTCAACACCTCTTCACGACTGGAGTCCAATGGTGAAGCGCTGAAGATCCATGTGTCTGCGGCCACGCGTGATGTCCTGCAGGAGTTCAACTGCTTCCAGCTGGAGCTGAGAGGAGACGTGGAGatgaaggggaaggggaaaaTGACCACCTACTGGCTACTGGGAGAGAGCAAGAACAACGAGTCAACGAGCTAAGGGGACGAGccaagggaaggagggaaaggaaGAAGTGGTGGAGGCAAACTTGAGCAAATAATGGGAACCACTGATTTGAAGTGCTGGAGCAAGTAATCAAATGAAGAGGCCTGGTgaatgaatggggggggggggg
>XM_036945026.1
ttccaGTGGAAACGAAAGCCTACCCCTGTGCCGGAGTAAGACGGCGCCAcgagatgaacacacacactttcatacaAGCACAGACACACTGTTCCAGCGTCAGGCAGTCAGTCTCTACTCGGACTGGCCAAGGCTGCCTCAGGCTATCCAGCGCAACActgaaatagacagacagagtaCAAGGAATACTGTCATGAaaccagacatacacacacaaacaataggGGGTCACAAACACGGATCTACAGCTGTGTGAGGAGCCGAACACACCCTCAGACCAGACGAAGGGAagcagagtgtgtgtgcgcgtgtttctTTGACCCGTGGCTGTAGAGGATTTTCCTGGTGTGTAACGGCACACTACTTTTGTCATCTCGCTTTCTCTACCTGATGCGGTGGGATTTCCTGACCCTGGAGTTCAACAGCTGACCCACGCAGGCCTAGAATCAGCTTCCCTGAGTTGGAAACCTGCTACACAGCTAAAGCTCTACAGGATAAATAATTCACAAGGACATTATTCAGCAGCCTAGCAGGATGAGGATGGAGGGAGTAAAACTGTTGCTGGTTCTTCTTCTGCTGCTGGGTGCCTGTCTCCAGTGGGTCCAGTCTGGCATGTCCTCCCGGCACCGTGATTCACACCGACGCCCCAGAGAGCACCGGGACCATCGGCAGCACGGGAACATCACGCTGGCCATCATCCTACCACAGAGAAACACTGCCTACCCCTGGGCCTGGCCCCGTGTGGGTCCGGCTCTGGACCGAGCCATCAACACCATCAACGCTGACCCAGCGCTCCTCCGCGGCCACCACCTGGGTTACGTGTTTGAGAACAGCGAGAACGAAGAAGGCATCTGCTCTGAGTCCATCGCCCCACTCATGGCTGTTGACCTCAAGTTCGCCCACGACCCTTGGGCTTTCATTGGGCCGGGCTGTGACTACACCTCCTCCCCAGTGGGCCTCTTCACCACCCACTGGGACATCCCCATGGTAACGGCGGGCGCCCCAGCCGTGGGCTTCAACGGCATCAACATGTACCCGTCCATCACCAACACGGGCCCCACGCACAAAAAGCTGGGCAAGTTCGGCCTCCATATCTGCAAGCACTTTGAGTGGAAGGAGCAGGTGCTGCTCATGTTCAGTGATAACAAGAAGGATGACCGGCCGTGCTACTTCGCTGTGGAGGGCCTCTACACAGAGCTACACTTGAACAACATCACCTCGGTGGACCTGGTGTTTGAGGAGAACACTGGACCTGTCAACTACTCTGACCTGCTCCACAACATCAAGCAAGATGGCCGAGTGGTGTTTGTGTGTTGCTCTCCGGACACGTTCAGGCAGCTGATGGTTCATTTCCAGCGGGCAGGCCTTCCTCAGGAGGAGTATGTTTTCTTCTACATTGACATGTTTGGACGCAGCCTGGACTCCCAGAATGCTCAACCCTGGGCCAGAGGGGACCAAGACGACCTTGTCGCCAAGGAGGCCTTCCAGAGTGTGAAAATCCTGACCTATAGAGAACCCCAGAACCCTGAATATAAAGATTTTGTGAGGGACCTGAAGACAGATGCCAAGAGAATGTTCAACTTTACGGTGGAGGACTCACTGATGAACATAATCTCTGGAGGGTTCTACGACGGGCTGATGCTGTACACCCATGCCCTGAACGAGACCATGACCTCGCCAGAGGACAGACCCGTGGGGAAAACCGTAACAAGGAGGATGTGGAACCGCACCTACAACGGTGTAACAGGCCTGGTGCAGATAGATGAGaatggggacagagagacagacttcGCTCTCTGGGACATGAATGACACCAACACCAGTGTTTTCCAGATTGTGTTGGTGTACAACGGCTCTCAGAAGAAGCTGAGGGCCTTGCCTGGGATGGACATCCAGTGGCCAGGGGGCGCTGCTCCTTTAGATGTGCCCGTCTGTGGCTTCAAGAACGACAACCCAGAATGCCTTGCACGAACCATCACAATCCACCAGATGGTAACAATTGTGGTGTtcttcatcattatcatcatcctcACCATTACTGTCTTCATATACAGGAAGCTGAAGCTTGAAAATGAGCTGGTGGCTCAGCTGTGGAGAGTCTCCTGGGAGGATATTCAGATGAGCAACATGGAGAAAGTGCTGCGAAGCGCAGGCAGCAAGCTCACTCTGTCCCTAAGGGGCTCCAACTACGGCTCCCTATTAACAGGAGATGGAAACTTTCAGGTGTTTGCCAAGACAGGCTATTACAAGGCAAATATTGTGGCCATCAAATACATCAACAGAAAACGCATTGAGCTCACCAGAAACGTGCTGTTTGAACTGAAACATATGCGTGATATTCAGAATGAGCACCTGACCCGCTTCATCGGAGCCTGCATCGATCCCCCCAACATCTGCATCATCACAGAGTACTGTCCTCGGGGTAGCCTACAGGACATCATGGAAAACGAGAGCATCACACTGGATTGGATGTTCAGATACTCTTTAATCAATGACATTGTCAAGGGCATGGCTTTCCTCCACAACAGTGTCATTGTCTCCCACGGCAACCTGAAGTCGTCCAACTGCGTGGTGGATAACCGCTTTGTGCTGAAGATCACCGACTACGGCCTGTCCAGCTTCCGCACCGAGAGCAACACAGATGACGCCCATGCTTACTATGCCCGGAAGCTGTGGATGGCCCCAGAGCTGCTGAGGTTGGAGAGACCCCCTCCATGTGGCACACAGAAGGGAGACGTCTACAGCTTTGGCATCATTCTCCAAGAGGTGGCGCTACGCCATGGAGCCTTCTATCTGGAGGGAGAGCCGCTCAGCCCcaaagAAATCATGGACCGGGTGGCTCTGGGTGAGTGGCCGTGCCTGCGGCCTGCTGTCAACCCTCAGATCCACAGCCAGGAGCTGGGCCAACTCATGCAGCGCTGCTGGGCAGAGGAGCCCACCGAGAGGCCCGAGTTCAACCACATCAAACTGCTGCTACGCAAACAGAACAGggagtgCAGCACTAACATCCTGGATAACCTGCTGTCCCGTATGGAGCAGTATGCTAACAACCTGGAGGAGCTGGTGGAGGAGAGAACCCAGGCCTACCACGAAGAGAAACGCAAGGCTGAGGCCCTGCTCTACCAGATACTACCACATTCAGTGGCGGAGCAGCTAAAGAGAGGGGAGACGGTACAGGCTGAGGCCTTTGATTCAGTCACCATCTACTTCAGTGACATTGTAGGCTTCACAGCCATATCAGCTGAGAGCACACCTATGCAGGTTGTGACCCTGCTCAATGACCTCTACACCTGTTTCGATGCCATCATTGACAACTTTGATGTTTACAAGGTGGAGACCATTGGTGATGCCTACATGGTGGTGTCCGGCCTGCCGGTGAGGAACGGGAAGCTACACGGCCGAGAGATCGCCCGCATGGCCCTGGCTCTGCTCAACGCCGTACGCACCTTCAAAATCCAACACCGACCCGACCAGCAGCTCAAACTACGCATTGGCATCCACAGCGGCCCTGTGTGTGCAGGAGTGGTGGGGCTGAAGATGCCACGGTACTGTCTGTTTGGAGACACAGTCAACACCTCTTCACGACTGGAGTCCAATGGTGAAGCGCTGAAGATCCATGTGTCTGCGGCCACGCGTGATGTCCTGCAGGAGTTCAACTGCTTCCAGCTGGAGCTGAGAGGAGACGTGGAGatgaaggggaaggggaaaaTGACCACCTACTGGCTACTGGGAGAGAGCAAGAACAACGAGTCAACGAGCTAAGGGGACGAGccaagggaaggagggaaaggaaGAAGTGGTGGAGGCAAACTTGAGCAAATAATGGGAACCACTGATTTGAAGTGCTGGAGCAAGTAATCAAATGAAGAGGCCTGGTgaatgaatggggggggggggg

Function

NR:

description
PREDICTED: atrial natriuretic peptide receptor 1-like

GO: NA

KEGG:

id description
K12323 ANPRA, NPR1; atrial natriuretic peptide receptor A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945018.1 False 4441 mRNA 0.53 22 30115535 30168611
XM_036945026.1 True 3898 mRNA 0.54 22 30115535 30168611

Neighbor

gene id symbol gene type direction distance location
LOC110486462 NA coding upstream 11842 30097171 ~ 30103693 (+)
LOC110486448 cr3l4 coding upstream 32143 30078648 ~ 30083392 (+)
gnrh-r LOC106605452 coding upstream 185181 29925736 ~ 29930354 (+)
LOC110486403 LOC106580236 coding upstream 200794 29900857 ~ 29914741 (+)
LOC110486369 LOC106605449 coding upstream 281730 29815780 ~ 29833805 (+)
gon4l LOC106605460 coding downstream 11374 30179985 ~ 30205554 (+)
LOC110534650 LOC106580339 coding downstream 37089 30205700 ~ 30209797 (+)
LOC110486492 LOC100194668 coding downstream 41872 30210483 ~ 30214827 (+)
LOC118944173 NA coding downstream 45667 30214278 ~ 30214413 (+)
LOC110486525 LOC106605463 coding downstream 65909 30234520 ~ 30249314 (+)
G130773 NA non-coding upstream 121395 29993917 ~ 29994140 (+)
G130451 NA non-coding upstream 182716 29855976 ~ 29932819 (+)
G130906 NA non-coding downstream 60804 30229415 ~ 30229738 (+)
G130907 NA non-coding downstream 61827 30230438 ~ 30230681 (+)
G130921 NA non-coding downstream 85872 30254483 ~ 30254722 (+)
G130793 NA non-coding downstream 144636 30313247 ~ 30313950 (+)
G130414 NA other upstream 325704 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 421684 29685855 ~ 29697686 (+)
G130308 NA other upstream 474439 29600026 ~ 29641096 (+)
G129155 NA other upstream 630405 29484633 ~ 29485130 (+)
LOC110534631 LOC106580029 other upstream 637405 29424822 ~ 29478401 (+)
G131491 NA other downstream 531571 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 579444 30748055 ~ 30749954 (+)
LOC110534710 LOC106605356 other downstream 1122859 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 1191825 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 1689037 31834170 ~ 31887572 (+)

Expression


Co-expression Network