LOC118944173


Basic Information

Item Value
gene id LOC118944173
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30214278 ~ 30214413 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039484.1
GCATGGACGAATTCTGTTTTACTTTGTCAGTAGTGAATGCAGTCAGACACCATGCAAAAACATTTTCACTCCTACTACTCTAAAGGATGAGTGCTTTCCAGTGCCTTATCTCCTTCACATCAAAGTGAATACAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039484.1 True 136 mRNA 0.40 1 30214278 30214413

Neighbor

gene id symbol gene type direction distance location
LOC110534650 LOC106580339 coding upstream 4481 30205700 ~ 30209797 (+)
gon4l LOC106605460 coding upstream 8724 30179985 ~ 30205554 (+)
LOC110486473 LOC106605459 coding upstream 45667 30115535 ~ 30168611 (+)
LOC110486462 NA coding upstream 110585 30097171 ~ 30103693 (+)
LOC110486448 cr3l4 coding upstream 130886 30078648 ~ 30083392 (+)
LOC110486525 LOC106605463 coding downstream 20107 30234520 ~ 30249314 (+)
LOC110486531 LOC106605464 coding downstream 47060 30261473 ~ 30311269 (+)
LOC110486559 LOC106605466 coding downstream 100172 30314585 ~ 30321121 (+)
LOC110486570 LOC106580396 coding downstream 112077 30326490 ~ 30349970 (+)
decr1 decr1 coding downstream 138355 30352768 ~ 30359695 (+)
G130879 NA non-coding upstream 57438 30155296 ~ 30156840 (+)
G130773 NA non-coding upstream 220138 29993917 ~ 29994140 (+)
LOC110486403 LOC106580236 non-coding upstream 302345 29900857 ~ 29914741 (+)
G130479 LOC106605450 non-coding upstream 314099 29892273 ~ 29900179 (+)
G130906 NA non-coding downstream 15002 30229415 ~ 30229738 (+)
G130907 NA non-coding downstream 16025 30230438 ~ 30230681 (+)
G130921 NA non-coding downstream 40070 30254483 ~ 30254722 (+)
G130793 NA non-coding downstream 98834 30313247 ~ 30313950 (+)
G130950 NA non-coding downstream 111519 30325932 ~ 30326157 (+)
G130414 NA other upstream 424447 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 520427 29685855 ~ 29697686 (+)
G130308 NA other upstream 573182 29600026 ~ 29641096 (+)
G129155 NA other upstream 729148 29484633 ~ 29485130 (+)
LOC110534631 LOC106580029 other upstream 736148 29424822 ~ 29478401 (+)
G131491 NA other downstream 485769 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 533642 30748055 ~ 30749954 (+)
LOC110534710 LOC106605356 other downstream 1077057 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 1146023 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 1643235 31834170 ~ 31887572 (+)

Expression


Co-expression Network