decr1 (decr1)


Basic Information

Item Value
gene id decr1
gene name decr1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30352768 ~ 30359695 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558303.2
ttctttacCTTACGGAAATCAGGgcaaaagtcaaatcaaatttagaAAACATGGCGTCCACTTTACTGTGTCGGGTGTCGTCAATTTCTAAAACTGATTTAATCTTGCCGTTGAAGAGTCTTGTCTACAGACGGTTGTTCAGCAGTGGGACCAGGGCATTGAGTGAGACTGGACCCTCGCAGGCTAAATTCTTTCCTGCAAATGAGGGATCAATGCTGCTCCCTGGGACTTACAAAGGCAAAGTGGCCTTTATCACAGGAGGAGGAACGGGGTTGGGAAAAGGCATGACCACAACACTGTCAGCACTAGGGGCAGAGTGTGTCATCGCTAGCAGAAAACTGGATGTTTTGAAAAAGACTGCAGAGGAAATTACAGCTCAGACAGGAAATAAGGTCCATGCTGTGCAGTGTGATGTTAGAGACCCCAAGTCAATTGAAGCTGCTGTGGACCAACTGGTAGAGGTTGCTGGTCTCCCTGATGTGGTGATCAACAACGCTGCAGGGAACTTCATCTCCCCGTCAGAGAAGCTGTCTGCCAACGCATGGAGGACCATCACAGACATCGTCCTGAACGGCACGGCCTTCGTCACCCTGGAACTGGGCAAGAGGCTGATACTGGCCGAGAAGGGTGCTGCGTTTCTGGCCATCACCACCATCTACGCAGAGACCGGCTCTGGATTTGTGGTTCCCAGTGCGGCTGCCAAGGCAGGAGTGGAAACTCTGTGCATGTCTCTGGCTGCGGAGTGGGGGAGGTACGGCTTGAGGTTTAATGTCATCCAGCCAGGACCAATCAGAACCAAGGGGGCCTTCAGTCGTCTCGATCCCACGGGCATGTTTGAGAAGGCCATGATCGGCAGGATACCCGTGGGCAGGCTGGGCACGCCCGGAGAGATTGCCAACCTGGCAGCCTACTTGTGCAGTGACTATGCCAGCTGGGTGTCTGGAGCGATAATTAGAATGGACGGTGGAGAGTATGTCTCCATGGCAGGAGAATTCAATGATCTGAGGAGGGTCACTAAGGAGCAGTGGGCTATGATGGAGACCATGATCAGGGGCACCAAGGGATCCTAAGAAGTCAAGATGGGAACACGATACTtccggggcagcaggtagcctagtggttagagcgttggactagtaactgaaaggttgcaagattgaatccccgagctgacaaggtaaaaatctgtcgttctgcccctgaacaaggcagttaacccactgttcctaggccgtcattgaaaataagaatttgttcttagctgacttgcttagttaattaaaggttaaaaaaattatatttacTAACTCTCTACCACTGTTAATGCTCCAGGGAAACACAgatactgtacacacagacaATCTTTCCCTCTGTTTCTGACCTAAAACAGAGATTATACCATGTCAGGGAATATGGCTACAggatcgacacacacacacacagccttctctacaaacacattctcacacactcaCTTAACCTCAAGCCTTATTTCTCATTGCCTAATGGACAAATCGACAGGATGGGGACAGTAGGGCAGCATTTGAAGAGAAAATGGCTTCATCAGGAGGCCAACTATTTAGAGGAGGTTCTCTCTCTCGAACCTCATCTTTTCGTTCTCACTCGGTCTGAGATTCTACTGGCTACAGCACTCCCTGGATGAAACTGGCTTCTTGTTGGTTGAAAAACCTGTCCGTTCCTACGATTGACTTGGTATTTTGCTAGTAACAtttatcatttgtttttacaaTGATGCCTTGAAAAGAATGAATTCTGTTCTTTTTCAAAAACATGTTTCAATGGCCTATCTAAGTTGACGTCCAGTAATGCTATTCATTGCTGTTAAGTGATTGTGTTGTGCTCTGTGTGTACAATAAGTGAGGTTTACATGAATATGTCTGTGTGGAGTATGTTGAATAAAAGACAGTAGACATTTTA
>XM_021558313.2
TATTAAAAACTTTAATGTGATgtgtaagttagctagctagctgctatttTAGCAGCAGGTTGttgttagttggctagctaactgtTAGGTGTGCTGCTATGGGAAAGCTGTGCAGCAGTTTAAACATAATTTCCGACGTTGACAGACATGAGTGCATTCTGAAATATTTCTGgcatagctagctacatttgttCCAGTGTTCTGCTACAGATAAATTGCTGAGAAGTGTAGGGACAGTTGACGATATGACCACTTTTGTGATGTTCATGCAAGAGCACATACTCAACTAAATACTAAACCTGTGTAGGCGGCTTGCTGTGTGTTCTCACAGCCAGACATGTAAGCATCTCAACCTTTCACCCAGTCCCCtctccactgggaatTTGTTCAGCAGTGGGACCAGGGCATTGAGTGAGACTGGACCCTCGCAGGCTAAATTCTTTCCTGCAAATGAGGGATCAATGCTGCTCCCTGGGACTTACAAAGGCAAAGTGGCCTTTATCACAGGAGGAGGAACGGGGTTGGGAAAAGGCATGACCACAACACTGTCAGCACTAGGGGCAGAGTGTGTCATCGCTAGCAGAAAACTGGATGTTTTGAAAAAGACTGCAGAGGAAATTACAGCTCAGACAGGAAATAAGGTCCATGCTGTGCAGTGTGATGTTAGAGACCCCAAGTCAATTGAAGCTGCTGTGGACCAACTGGTAGAGGTTGCTGGTCTCCCTGATGTGGTGATCAACAACGCTGCAGGGAACTTCATCTCCCCGTCAGAGAAGCTGTCTGCCAACGCATGGAGGACCATCACAGACATCGTCCTGAACGGCACGGCCTTCGTCACCCTGGAACTGGGCAAGAGGCTGATACTGGCCGAGAAGGGTGCTGCGTTTCTGGCCATCACCACCATCTACGCAGAGACCGGCTCTGGATTTGTGGTTCCCAGTGCGGCTGCCAAGGCAGGAGTGGAAACTCTGTGCATGTCTCTGGCTGCGGAGTGGGGGAGGTACGGCTTGAGGTTTAATGTCATCCAGCCAGGACCAATCAGAACCAAGGGGGCCTTCAGTCGTCTCGATCCCACGGGCATGTTTGAGAAGGCCATGATCGGCAGGATACCCGTGGGCAGGCTGGGCACGCCCGGAGAGATTGCCAACCTGGCAGCCTACTTGTGCAGTGACTATGCCAGCTGGGTGTCTGGAGCGATAATTAGAATGGACGGTGGAGAGTATGTCTCCATGGCAGGAGAATTCAATGATCTGAGGAGGGTCACTAAGGAGCAGTGGGCTATGATGGAGACCATGATCAGGGGCACCAAGGGATCCTAAGAAGTCAAGATGGGAACACGATACTtccggggcagcaggtagcctagtggttagagcgttggactagtaactgaaaggttgcaagattgaatccccgagctgacaaggtaaaaatctgtcgttctgcccctgaacaaggcagttaacccactgttcctaggccgtcattgaaaataagaatttgttcttagctgacttgcttagttaattaaaggttaaaaaaattatatttacTAACTCTCTACCACTGTTAATGCTCCAGGGAAACACAgatactgtacacacagacaATCTTTCCCTCTGTTTCTGACCTAAAACAGAGATTATACCATGTCAGGGAATATGGCTACAggatcgacacacacacacacagccttctctacaaacacattctcacacactcaCTTAACCTCAAGCCTTATTTCTCATTGCCTAATGGACAAATCGACAGGATGGGGACAGTAGGGCAGCATTTGAAGAGAAAATGGCTTCATCAGGAGGCCAACTATTTAGAGGAGGTTCTCTCTCTCGAACCTCATCTTTTCGTTCTCACTCGGTCTGAGATTCTACTGGCTACAGCACTCCCTGGATGAAACTGGCTTCTTGTTGGTTGAAAAACCTGTCCGTTCCTACGATTGACTTGGTATTTTGCTAGTAACAtttatcatttgtttttacaaTGATGCCTTGAAAAGAATGAATTCTGTTCTTTTTCAAAAACATGTTTCAATGGCCTATCTAAGTTGACGTCCAGTAATGCTATTCATTGCTGTTAAGTGATTGTGTTGTGCTCTGTGTGTACAATAAGTGAGGTTTACATGAATATGTCTGTGTGGAGTATGTTGAATAAAAGACAGTAGACATTTTA

Function

symbol description
decr1 Orthologous to human DECR1 (2,4-dienoyl-CoA reductase 1).

NR:

description
2,4-dienoyl-CoA reductase, mitochondrial-like isoform X1

GO: NA

KEGG:

id description
K13236 DECR1; 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558303.2 False 1938 mRNA 0.47 10 30352768 30359695
XM_021558313.2 True 2187 mRNA 0.47 10 30352944 30359695

Neighbor

gene id symbol gene type direction distance location
LOC110486570 LOC106580396 coding upstream 2798 30326490 ~ 30349970 (+)
LOC110486559 LOC106605466 coding upstream 31647 30314585 ~ 30321121 (+)
LOC110486531 LOC106605464 coding upstream 41499 30261473 ~ 30311269 (+)
LOC110486525 LOC106605463 coding upstream 103454 30234520 ~ 30249314 (+)
LOC110486492 LOC100194668 coding upstream 137941 30210483 ~ 30214827 (+)
LOC110534660 LOC106605472 coding downstream 125677 30485372 ~ 30505119 (+)
LOC110486625 LOC106605474 coding downstream 158748 30518443 ~ 30530346 (+)
LOC110486681 LOC106580557 coding downstream 173133 30532828 ~ 30542573 (+)
si:dkey-22o22.2 LOC106605377 coding downstream 258308 30618003 ~ 30746151 (+)
LOC110486724 LOC106581338 coding downstream 439085 30798780 ~ 30807966 (+)
G130950 NA non-coding upstream 26611 30325932 ~ 30326157 (+)
G130793 NA non-coding upstream 38818 30313247 ~ 30313950 (+)
G130921 NA non-coding upstream 98046 30254483 ~ 30254722 (+)
G130907 NA non-coding upstream 122087 30230438 ~ 30230681 (+)
G130906 NA non-coding upstream 123030 30229415 ~ 30229738 (+)
G130947 NA non-coding downstream 4685 30364380 ~ 30364733 (+)
G130799 NA non-coding downstream 34494 30394189 ~ 30397680 (+)
G130988 NA non-coding downstream 69533 30429228 ~ 30429516 (+)
G130993 NA non-coding downstream 80237 30439932 ~ 30440195 (+)
G131262 NA non-coding downstream 95535 30455230 ~ 30455459 (+)
G130414 NA other upstream 562937 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 658917 29685855 ~ 29697686 (+)
G130308 NA other upstream 711672 29600026 ~ 29641096 (+)
G129155 NA other upstream 867638 29484633 ~ 29485130 (+)
LOC110534631 LOC106580029 other upstream 874638 29424822 ~ 29478401 (+)
G131491 NA other downstream 340487 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 388360 30748055 ~ 30749954 (+)
LOC110534710 LOC106605356 other downstream 931775 31262054 ~ 31294577 (+)
eaf1 LOC106581241 other downstream 1000741 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 1497953 31834170 ~ 31887572 (+)

Expression


Co-expression Network