c2h8orf37 (cssa05h8orf37)


Basic Information

Item Value
gene id c2h8orf37
gene name cssa05h8orf37
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30889693 ~ 30896340 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002468109.2
aaaaaatggttaccaatgtaatttgagttttgctaaaacacaatatcagtcagtgtctgatatatttgtaattttatgtTGGCTATTACCGGTTTTTGTCTCCAATAATATCagcagttgtcgtggccgagtggttaaggcgatggactagaaatccattgggatcttcccgcgcaggttcgaatcctgccgacaacgtgatTTTTTCTCCTGTGATTGGTAATGCCCAGGCGTTTACATTGTATCATAGATAGCCAGTATCTTGTATCACTACACATAAATCGCTAGCTACACGGTATCAATCTTTACCTACTTGAAATGAGGTTACGCCTGTCAATCAAGCACTCCTGTTCATGACAACAGTCAATAAGCAGCAGTACCCTGAAGCTATGGCGGACGATTTGGACGAATTGCTAGATGAGGTTGAAACAAAGTTCTGTCGCAATGTTTCATTGACGCCACAACTTCAAGCTCCCTCAGATTTATCGACGGCTGGGAAATGTTTAACGCAAACTGGGAAAGAAAGAAAACACTGcaccactgacgatacacccagaaaaacggacagcgaagatatagatgcccttctcgaggacatacttgacgatgatttcgattcccttgcgctaaacACTGGACAGCTTCCTAAAATGACGAAGACATTGCCACAGTCCACAAGAAAGTGCTGCCCAGTTTTCCTTGGTGGAAGCTCCATTGCAAATGGTGTAGGAACAGCTGTTTCACAAAGGTCGTGTGATCAGCTGAGATGTATCTCCTGTGACTTTCGGGTGGCCATGTTTGACGATCATGAATGGGACCCCTCTTGTGATTACCTCTTCTTCAGGAACAACATGCCAGACTGTCAGAAGCTGCGGGCTAAGCTGAGGAGAAGAAAAGGGGCGCGGGCGTACGCCTGCCAGTGTAGCTGGCACTCTGCTCGAGACCTCAACGACCTGAGAGAACAGCACCAGCTCAAGTGGGTCTGTGGGAAGCATGAATGGAGAAGCGAAGGTGGTTAAgaccgttgggccagtaaccgaaaggtcgctggtttgaatccacaCGCTAACgagtcctcccggttttgactcttgcctgttttctggactttacccacctgcctgaccattctgcctgccc
>XM_021558578.2
aaaaaatggttaccaatgtaatttgagttttgctaaaacacaatatcagtcagtgtctgatatatttgtaattttatgtTGGCTATTACCGGTTTTTGTCTCCAATAATATCagcagttgtcgtggccgagtggttaaggcgatggactagaaatccattgggatcttcccgcgcaggttcgaatcctgccgacaacgtgatTTTTTCTCCTGTGATTGGTAATGCCCAGGCGTTTACATTGTATCATAGATAGCCAGTATCTTGTATCACTACACATAAATCGCTAGCTACACGGTATCAATCTTTACCTACTTGAAATGAGGTTACGCCTGTCAATCAAGCACTCCTGTTCATGACAACAGTCAATAAGCAGCAGTACCCTGAAGCTATGGCGGACGATTTGGACGAATTGCTAGATGAGGTTGAAACAAAGTTCTGTCGCAATGTTTCATTGACGCCACAACTTCAAGCTCCCTCAGATTTATCGACGGCTGGGAAATGTTTAACGCAAACTGGGAAAGAAAGAAAACACTGcaccactgacgatacacccagaaaaacggacagcgaagatatagatgcccttctcgaggacatacttgacgatgatttcgattcccttgcgctaaacACTGGACAGCTTCCTAAAATGACGAAGACATTGCCACAGTCCACAAGAAAGTGCTGCCCAGTTTTCCTTGGTGGAAGCTCCATTGCAAATGGTGTAGGAACAGCTGTTTCACAAAGGTCGTGTGATCAGCTGAGATGTATCTCCTGTGACTTTCGGGTGGCCATGTTTGACGATCATGAATGGGACCCCTCTTGTGATTACCTCTTCTTCAGGAACAACATGCCAGACTGTCAGAAGCTGCGGGCTAAGCTGAGGAGAAGAAAAGGGGCGCGGGCGTACGCCTGCCAGTGTAGCTGGCACTCTGCTCGAGACCTCAACGACCTGAGAGAACAGCACCAGCTCAAGTGGGTCTGTGGGAAGCATGAATGGAGAAGCGAAGGTGGTTAAgaccgttgggccagtaaccgaaaggtcgctggtttgaatccacaCGCTAACgaggtgagaaaaaaaatatgtctgcgctcttgagcaaggcaattaaacATAATTGCTCCTGTTTGTCTTTCTGGATAATAACAACTGCTAATATGTAAATGACTCTGTTTTATAGTTCTCACTTCACTGCTATGTTTGATGAAATGCTAGTAATTTGTTATGTCATCGTAGTCACTGTCAGAAAGAGACTGGTCCGGGTCTTCTTTCACAGTAGCATCACCAATCCCCTCTTCATCTTGGACTTCTATGTTCTCATAAAGCTCAGAGGAAGATGAGCTGCTTGAATCTTCTGTATAAAGGATTCACATTACCATTTACATACATCCACAATAAGCTACATGTTTTCAGCAATTTGCATCTAcaataccttcagaaagtatttacacccattgactttttccatattatGTTGTTACACAGCcttaatttaaaatggattaaatttagattttgtgtcactggcctacacacaataccccataatgtcaaagtggaattatgtttgtaGCAACAgtatgtgcaataatagtgttcaacatgatgtttgaatgactaccacacgcaattatctgtaaggtccctcagtaaaGCAGTGAACTTCAAACCGATTCAACTTCAAAGACATTCAAGGTTTCCCATtgcctcgtaaagaagggcacctattggtagatggggaaaaataaaaaagcacacatggaatatccctttgagaataGTGAAGTTTTTcatgacactttggatggtgtatcaatatacccagtcactacaaagatacatccTTCCTACTcagttgccgaagaggaaggaaaccgctaagggatttcaccatgaggccaatggtaactttaaaacagttacagagtttaatgactgtgatggGAGAAAATTGAGGATAGATTAACAacatactccacaatactaacctaaatgggggaaaaaaggaaacctgtacagaataaatatatttcaaaacatgcatcctgtttgcaataaggcactaaagtaaaactgcaaaacatgtgacaaagaaattaactttatgtcctaaaTACAGAGTGTTATGTTTGGGATAAATCCAACActtcactgagtaccactcttcattttGTCAAGtatggtggttgcatcatgttaagggtatgcttgtcatcagcaaggagtagagagttttttaggataaaaataaacagaattgagccaagcacaggcaaaatactagaggaaaacctggttcagtctgcttttcaatagacacagggagacaaattcacctttcagcaggacaaaaacctaaaacacaaggcaaaatatACATTGGCCTAGTTAAAGTTTTGATTTAAATTGGCTTAAATATATGGCATGACTTggaaattgtcacaccctgatctgtttcacctatccgtgtgcttgtctccaccccctccaggtgtcacccatcttcccctgggtatttaaacttgtgttttctgtctgtctgttgtcagtttgtcttgtatg
>TU151687
CAACAGTCAATAAGCAGCAGTACCCTGAAGCTATGGCGGACGATTTGGACGAATTGCTAGATGAGGTTGAAACAAAGTTCTGTCGCAATGTTTCATTGACGCCACAACTTCAAGCTCCCTCAGATTTATCGACGGCTGGGAAATGTTTAACGCAAACTGGGAAAGAAAGAAAACACTGGTGCGTAGTAAAATGCAAGTGTCAACCGGCTAACGTTAacgatagctaacgttagtacgGGGGAATGGACTAAAGTTAGCAAGCAAGGTTAGCAAACCAAGTTGTTGACCATGACTGACACAGTGGAAGCTTATGCAACGTAACTAACGACAATAGCTATGTAACGTAGTTGCAAACGCCAGCCTTcctaaaatgcattgttatttaatcaagcatgttagctaaatcacgtagttagctatgtaacgttagcttgctaaaactgttcctcgcttcacaccgtcagcaccactgacgatacacccagaaaaacggacagcgaagatatagatgcccttctcgaggacatacttgacgatgatttcgattcccttgcgctaaacACTGGACAGCTTCCTAAAATGACGAAGACATTGCCACAGTCCACAAGAAAGTGCTGCCCAGTTTTCCTTGGTGGAAGCTCCATTGCAAATGGTGTAGGAACAGCTGTTTCACAAAGGTCGTGTGATCAGCTGAGATGTATCTCCTGTGACTTTCGGGTGGCCATGTTTGACGATCATGAATGGGACCCCTCTTGTGATTACCTCTTCTTCAGGAACAACATGCCAGACTGTCAGAAGCTGCGGGCTAAGCTGAGGAGAAGAAAAGGGGCGCGGGCGTACGCCTGCCAGTGTAGCTGGCACTCTGCTCGAGACCTCAACGACCTGAGAGAACAGCACCAGCTCAAGTGGGTCTGTGGGAAGCATGAAGTATGACAGccttctctctatcacacacacacacacacaccatcactttGCAGTTACTTGAAAACCAATGTCCTCTTGTTATAGACATCCCAACACACATTTTTTCTGCCTTGAGAATGATGTAGGTCTTTCTCTGCATTACATTTAGTGTGTTCTGGGTTTAAATGTAAATGAACAAGGTAGGTCTTCTGCTATCTTTAGAGATGTGATTTTAGCTAGCTCAGTTTTAAGAGCAGGTATATGCCAGACCATACTTGTGTGAAAACGGTACTTAGGAAAGATGAGGCTAAATTGAATAGAGTCTtttatgtataaaataaaaatagtaatgaAGACATTCCATTATCTGGTAGTATTTCATATACAATGCTGTTACATGCTTTTCTGTAGCCTTTCCTTCTCTGTCTTAGTTTCTAATTCCCTTGTCCTTTTGTTTATTTCCTCTTCTGTCCCTTTGAGTCAAATGCATTCTCTGTTTTAAGGGATTTCTGATCTTACCATTCATGTATTGTGTATAGTATGAAGGTGAGGTTAGTGTGAAGTTAAATGACCCTAACCTTTCCTGTTGCATCTGTGCTAGacatttagaagaaaaaaaacattaaacatAAAATAATCACTTCACTCTGACAGTCTAGTAGTTGATACTTTATAAATGAATGATAATCAAATTAAGTAGTCTGTGGATAGTTTATTAAATATCTACTAATTCTACTAATCCCAAAAAAAAGCTTAACTTCCAAAGACATTTGTTGTGATAGCCCAgtcagaagtatatattttagaTTGCAAAACATGTGCTCATATTATGTACAAAGCATCTGCATATGTGTTTATACACTAGACTATTCACATAAAGTCTTAGTTGAATAAATGTTGTATGCACTTCATTTTTGTTGCTTTTTCTCCCTGATAATATTAACACAATTGAATTTCAAGTTTAAAAAGTTTGACTGTGCTTTGTGTGGCTCAGGTCACCGTATGAATCAATATCAGTGACAGTGCTGTTTGTTCACAATGCTGGTCATTCTGTGCAGTGGAGAAGCGAAGGTGGTTAAgaccgttgggccagtaaccgaaaggtcgctggtttgaatccacaCGCTAACgaggtgagaaaaaaaatatgtctgcgctcttgagcaaggcaattaaacATAATTGCTCCTGTTTGTCTTTCTGGATAATAACAACTGCTAATATGTAAATGACTCTGTTTTATAGTTCTCACTTCACTGCTATGTTTGATGAAATGCTAGTAATTTGTTATGTCATCGTAGTCACTGTCAGAAAGAGACTGGTCCGGGTCTTCTTTCACAGTAGCATCACCAATCCCCTCTTCATCTTGGACTTCTATGTTCTCATAAAGCTCAGAGGAAGATGAGCTGCTTGAATCTTCTGTATAAAGGATTCACATTACCATTTACATACATCCACAATAAGCTACATGTTTTCAGCAATTTGCATCTAcaataccttcagaaagtatttacacccattgactttttccatattatGTTGTTACACAGCcttaatttaaaatggattaaatttagattttgtgtcactggcctacacacaataccccataatgtcaaagtggaattatgtttgtaGCAACAgtatgtgcaataatagtgttcaacatgatgtttgaatgactaccacacgcaattatctgtaaggtccctcagtaaaGCAGTGAACTTCAAACCGATTCAACTTCAAAGACATTCAAGGTTTCCCATtgcctcgtaaagaagggcacctattggtagatggggaaaaataaaaaagcacacatggaatatccctttgagaataGTGAAGTTTTTcatgacactttggatggtgtatcaatatacccagtcactacaaagatacatccTTCCTACTcagttgccgaagaggaaggaaaccgctaagggatttcaccatgaggccaatggtaactttaaaacagttacagagtttaatgactgtgatggGAGAAAATTGAGGATAGATTAACAacatactccacaatactaacctaaatgggggaaaaaaggaaacctgtacagaataaatatatttcaaaacatgcatcctgtttgcaataaggcactaaagtaaaactgcaaaacatgtgacaaagaaattaactttatgtcctaaaTACAGAGTGTTATGTTTGGGATAAATCCAACActtcactgagtaccactcttcattttGTCAAGtatggtggttgcatcatgttaagggtatgcttgtcatcagcaaggagtagagagttttttaggataaaaataaacagaattgagccaagcacaggcaaaatactagaggaaaacctggttcagtctgcttttcaatagacacagggagacaaattcacctttcagcaggacaaaaacctaaaacacaaggcaaaatatACATTGGCCTAGTTAAAGTTTTGATTTAAATTGGCTTAAATATATGGCATGACTTggaaattgtcacaccctgatctgtttcacctatccgtgtgcttgtctccaccccctccaggtgtcacccatcttcccctgggtatttaaacttgtgttttctgtctgtctgttgtcagtttgtcttgtatgttccaagtcaaccagtgtgttttcccTGTGGTCGtgccttttctattctcttttactagtcctcccggttttgactcttgcctgttttctggactttacccacctgcctgaccattctgcctgccctgacctcgagcctgcctgccacactgtacctcctggactctgaactggttttgaccttttgcctctccacgaccattctcttgcctaccccttttggattattaataaatatcaaagactca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002468109.2 False 1140 mRNA 0.47 8 30889815 30896340
XM_021558578.2 False 2567 mRNA 0.41 7 30889941 30896340
TU151687 True 3781 TUCP 0.44 5 30889693 30895983

Neighbor

gene id symbol gene type direction distance location
nagpa LOC106605373 coding downstream 91024 30779459 ~ 30798791 (-)
LOC110486727 tp53inp1 coding downstream 116412 30761285 ~ 30773403 (-)
LOC110486705 ccne2 coding downstream 131272 30748055 ~ 30758543 (-)
gbp LOC106605477 coding downstream 330855 30557560 ~ 30558960 (-)
LOC110486664 LOC106605475 coding downstream 371788 30509858 ~ 30518027 (-)
trnae-cuc LOC106605367 coding upstream 997 30897026 ~ 30899564 (-)
trnas-aga-3 NA coding upstream 15137 30911477 ~ 30911558 (-)
trnas-aga-4 NA coding upstream 17192 30913532 ~ 30913613 (-)
trnas-aga-5 NA coding upstream 40196 30936536 ~ 30936617 (-)
trnas-aga-6 NA coding upstream 69035 30965375 ~ 30965456 (-)
G131663 NA non-coding downstream 73953 30814673 ~ 30815862 (-)
G131661 NA non-coding downstream 79088 30810324 ~ 30810727 (-)
G131630 LOC106605377 non-coding downstream 158514 30730724 ~ 30731301 (-)
G131629 NA non-coding downstream 160168 30729432 ~ 30729647 (-)
G131628 LOC106605377 non-coding downstream 160841 30728577 ~ 30728974 (-)
G131712 NA non-coding upstream 18998 30915338 ~ 30918439 (-)
G131723 NA non-coding upstream 204639 31100979 ~ 31101745 (-)
G132020 NA non-coding upstream 255251 31151591 ~ 31175420 (-)
LOC110486852 LOC106605360 non-coding upstream 299026 31192419 ~ 31196292 (-)
G132066 NA non-coding upstream 303064 31199404 ~ 31202388 (-)
LOC110486376 LOC106605451 other downstream 1011247 29859575 ~ 29878744 (-)
LOC110534614 LOC106605399 other downstream 2411984 28475823 ~ 28533709 (-)
G129582 NA other downstream 2579083 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 2739829 27933389 ~ 28149986 (-)
G129250 NA other downstream 3123283 27766157 ~ 27766532 (-)
LOC110486868 LOC106605361 other upstream 300733 31196917 ~ 31199241 (-)
G132197 NA other upstream 639707 31536047 ~ 31543009 (-)
LOC110486999 prdm1 other upstream 738980 31631886 ~ 31648795 (-)
trnas-aga-2 NA coding upstream 160 30896143 ~ 30896224 (-)

Expression


Co-expression Network