Gene
RNA
| Item | Value |
|---|---|
| gene id | trnas-aga |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 30894881 ~ 30894962 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnas-aga | True | 82 | mRNA | 0.52 | 1 | 30894881 | 30894962 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nagpa | LOC106605373 | coding | downstream | 96090 | 30779459 ~ 30798791 (-) |
| LOC110486727 | tp53inp1 | coding | downstream | 121478 | 30761285 ~ 30773403 (-) |
| LOC110486705 | ccne2 | coding | downstream | 136338 | 30748055 ~ 30758543 (-) |
| gbp | LOC106605477 | coding | downstream | 335921 | 30557560 ~ 30558960 (-) |
| LOC110486664 | LOC106605475 | coding | downstream | 376854 | 30509858 ~ 30518027 (-) |
| trnas-aga-2 | NA | coding | upstream | 1181 | 30896143 ~ 30896224 (-) |
| trnae-cuc | LOC106605367 | coding | upstream | 2375 | 30897026 ~ 30899564 (-) |
| trnas-aga-3 | NA | coding | upstream | 16515 | 30911477 ~ 30911558 (-) |
| trnas-aga-4 | NA | coding | upstream | 18570 | 30913532 ~ 30913613 (-) |
| trnas-aga-5 | NA | coding | upstream | 41574 | 30936536 ~ 30936617 (-) |
| G131663 | NA | non-coding | downstream | 79019 | 30814673 ~ 30815862 (-) |
| G131661 | NA | non-coding | downstream | 84154 | 30810324 ~ 30810727 (-) |
| G131630 | LOC106605377 | non-coding | downstream | 163580 | 30730724 ~ 30731301 (-) |
| G131629 | NA | non-coding | downstream | 165234 | 30729432 ~ 30729647 (-) |
| G131628 | LOC106605377 | non-coding | downstream | 165907 | 30728577 ~ 30728974 (-) |
| G131712 | NA | non-coding | upstream | 20376 | 30915338 ~ 30918439 (-) |
| G131723 | NA | non-coding | upstream | 206017 | 31100979 ~ 31101745 (-) |
| G132020 | NA | non-coding | upstream | 256629 | 31151591 ~ 31175420 (-) |
| LOC110486852 | LOC106605360 | non-coding | upstream | 300404 | 31192419 ~ 31196292 (-) |
| G132066 | NA | non-coding | upstream | 304442 | 31199404 ~ 31202388 (-) |
| LOC110486376 | LOC106605451 | other | downstream | 1016313 | 29859575 ~ 29878744 (-) |
| LOC110534614 | LOC106605399 | other | downstream | 2417050 | 28475823 ~ 28533709 (-) |
| G129582 | NA | other | downstream | 2584149 | 28310319 ~ 28310732 (-) |
| LOC110485663 | LOC106579570 | other | downstream | 2744895 | 27933389 ~ 28149986 (-) |
| G129250 | NA | other | downstream | 3128349 | 27766157 ~ 27766532 (-) |
| LOC110486868 | LOC106605361 | other | upstream | 302111 | 31196917 ~ 31199241 (-) |
| G132197 | NA | other | upstream | 641085 | 31536047 ~ 31543009 (-) |
| LOC110486999 | prdm1 | other | upstream | 740358 | 31631886 ~ 31648795 (-) |
