Gene
RNA
| Item | Value |
|---|---|
| gene id | trnas-aga-3 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 30911477 ~ 30911558 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnas-aga-3 | True | 82 | mRNA | 0.52 | 1 | 30911477 | 30911558 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnae-cuc | LOC106605367 | coding | downstream | 14069 | 30897026 ~ 30899564 (-) |
| c2h8orf37 | cssa05h8orf37 | coding | downstream | 15137 | 30889693 ~ 30896340 (-) |
| trnas-aga-2 | NA | coding | downstream | 15253 | 30896143 ~ 30896224 (-) |
| trnas-aga | NA | coding | downstream | 16515 | 30894881 ~ 30894962 (-) |
| nagpa | LOC106605373 | coding | downstream | 112686 | 30779459 ~ 30798791 (-) |
| trnas-aga-4 | NA | coding | upstream | 1974 | 30913532 ~ 30913613 (-) |
| trnas-aga-5 | NA | coding | upstream | 24978 | 30936536 ~ 30936617 (-) |
| trnas-aga-6 | NA | coding | upstream | 53817 | 30965375 ~ 30965456 (-) |
| trnas-aga-7 | NA | coding | upstream | 58393 | 30969951 ~ 30970032 (-) |
| trnas-aga-8 | NA | coding | upstream | 67775 | 30979333 ~ 30979414 (-) |
| G131663 | NA | non-coding | downstream | 95615 | 30814673 ~ 30815862 (-) |
| G131661 | NA | non-coding | downstream | 100750 | 30810324 ~ 30810727 (-) |
| G131630 | LOC106605377 | non-coding | downstream | 180176 | 30730724 ~ 30731301 (-) |
| G131629 | NA | non-coding | downstream | 181830 | 30729432 ~ 30729647 (-) |
| G131628 | LOC106605377 | non-coding | downstream | 182503 | 30728577 ~ 30728974 (-) |
| G131712 | NA | non-coding | upstream | 3780 | 30915338 ~ 30918439 (-) |
| G131723 | NA | non-coding | upstream | 189421 | 31100979 ~ 31101745 (-) |
| G132020 | NA | non-coding | upstream | 240033 | 31151591 ~ 31175420 (-) |
| LOC110486852 | LOC106605360 | non-coding | upstream | 283808 | 31192419 ~ 31196292 (-) |
| G132066 | NA | non-coding | upstream | 287846 | 31199404 ~ 31202388 (-) |
| LOC110486376 | LOC106605451 | other | downstream | 1032909 | 29859575 ~ 29878744 (-) |
| LOC110534614 | LOC106605399 | other | downstream | 2433646 | 28475823 ~ 28533709 (-) |
| G129582 | NA | other | downstream | 2600745 | 28310319 ~ 28310732 (-) |
| LOC110486868 | LOC106605361 | other | upstream | 285515 | 31196917 ~ 31199241 (-) |
| G132197 | NA | other | upstream | 624489 | 31536047 ~ 31543009 (-) |
| LOC110486999 | prdm1 | other | upstream | 723762 | 31631886 ~ 31648795 (-) |
| LOC110514821 | NA | other | upstream | 1827271 | 32738829 ~ 32756992 (-) |
