trnas-aga-4



Basic Information


Item Value
gene id trnas-aga-4
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 30913532 ~ 30913613 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnas-aga-4
gttgtcgtggccgagtggtgaaggcgatggactagaaatccattgggatcttcccgcgcaggttcgaatcctgccgacaacg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnas-aga-4 True 82 mRNA 0.56 1 30913532 30913613

Neighbor


gene id symbol gene type direction distance location
trnas-aga-3 NA coding downstream 1974 30911477 ~ 30911558 (-)
trnae-cuc LOC106605367 coding downstream 16124 30897026 ~ 30899564 (-)
c2h8orf37 cssa05h8orf37 coding downstream 17192 30889693 ~ 30896340 (-)
trnas-aga-2 NA coding downstream 17308 30896143 ~ 30896224 (-)
trnas-aga NA coding downstream 18570 30894881 ~ 30894962 (-)
trnas-aga-5 NA coding upstream 22923 30936536 ~ 30936617 (-)
trnas-aga-6 NA coding upstream 51762 30965375 ~ 30965456 (-)
trnas-aga-7 NA coding upstream 56338 30969951 ~ 30970032 (-)
trnas-aga-8 NA coding upstream 65720 30979333 ~ 30979414 (-)
trnas-aga-9 NA coding upstream 68589 30982202 ~ 30982283 (-)
G131663 NA non-coding downstream 97670 30814673 ~ 30815862 (-)
G131661 NA non-coding downstream 102805 30810324 ~ 30810727 (-)
G131630 LOC106605377 non-coding downstream 182231 30730724 ~ 30731301 (-)
G131629 NA non-coding downstream 183885 30729432 ~ 30729647 (-)
G131628 LOC106605377 non-coding downstream 184558 30728577 ~ 30728974 (-)
G131712 NA non-coding upstream 1725 30915338 ~ 30918439 (-)
G131723 NA non-coding upstream 187366 31100979 ~ 31101745 (-)
G132020 NA non-coding upstream 237978 31151591 ~ 31175420 (-)
LOC110486852 LOC106605360 non-coding upstream 281753 31192419 ~ 31196292 (-)
G132066 NA non-coding upstream 285791 31199404 ~ 31202388 (-)
LOC110486376 LOC106605451 other downstream 1034964 29859575 ~ 29878744 (-)
LOC110534614 LOC106605399 other downstream 2435701 28475823 ~ 28533709 (-)
G129582 NA other downstream 2602800 28310319 ~ 28310732 (-)
LOC110486868 LOC106605361 other upstream 283460 31196917 ~ 31199241 (-)
G132197 NA other upstream 622434 31536047 ~ 31543009 (-)
LOC110486999 prdm1 other upstream 721707 31631886 ~ 31648795 (-)
LOC110514821 NA other upstream 1825216 32738829 ~ 32756992 (-)

Expression



Co-expression Network