trnas-aga-17



Basic Information


Item Value
gene id trnas-aga-17
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31000051 ~ 31000132 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnas-aga-17
gttgtcgtggccgagtggttaaggcgatggactagaaatccattgggatcttcccgcgcaggttcgaatcctgccgacaacg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnas-aga-17 True 82 mRNA 0.52 1 31000051 31000132

Neighbor


gene id symbol gene type direction distance location
trnas-aga-16 NA coding downstream 1973 30997997 ~ 30998078 (-)
trnas-aga-15 NA coding downstream 4044 30995926 ~ 30996007 (-)
trnas-aga-14 NA coding downstream 6107 30993863 ~ 30993944 (-)
trnas-aga-13 NA coding downstream 8160 30991810 ~ 30991891 (-)
trnas-aga-12 NA coding downstream 10223 30989747 ~ 30989828 (-)
trnas-aga-18 NA coding upstream 1974 31002106 ~ 31002187 (-)
trnas-aga-19 NA coding upstream 4029 31004161 ~ 31004242 (-)
trnas-aga-20 NA coding upstream 6231 31006363 ~ 31006444 (-)
trnas-aga-21 NA coding upstream 8285 31008417 ~ 31008498 (-)
trnas-aga-22 NA coding upstream 10339 31010471 ~ 31010552 (-)
G131712 NA non-coding downstream 81612 30915338 ~ 30918439 (-)
G131663 NA non-coding downstream 184189 30814673 ~ 30815862 (-)
G131661 NA non-coding downstream 189324 30810324 ~ 30810727 (-)
G131630 LOC106605377 non-coding downstream 268750 30730724 ~ 30731301 (-)
G131629 NA non-coding downstream 270404 30729432 ~ 30729647 (-)
G131723 NA non-coding upstream 100847 31100979 ~ 31101745 (-)
G132020 NA non-coding upstream 151459 31151591 ~ 31175420 (-)
LOC110486852 LOC106605360 non-coding upstream 195234 31192419 ~ 31196292 (-)
G132066 NA non-coding upstream 199272 31199404 ~ 31202388 (-)
G132075 NA non-coding upstream 225126 31225258 ~ 31225789 (-)
trnae-cuc LOC106605367 other downstream 100487 30897026 ~ 30899564 (-)
c2h8orf37 cssa05h8orf37 other downstream 104068 30889693 ~ 30896340 (-)
LOC110486376 LOC106605451 other downstream 1121483 29859575 ~ 29878744 (-)
LOC110534614 LOC106605399 other downstream 2522220 28475823 ~ 28533709 (-)
G129582 NA other downstream 2689319 28310319 ~ 28310732 (-)
LOC110486868 LOC106605361 other upstream 196941 31196917 ~ 31199241 (-)
G132197 NA other upstream 535915 31536047 ~ 31543009 (-)
LOC110486999 prdm1 other upstream 635188 31631886 ~ 31648795 (-)
LOC110514821 NA other upstream 1738697 32738829 ~ 32756992 (-)

Expression



Co-expression Network