mxtx2


Basic Information

Item Value
gene id mxtx2
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31255824 ~ 31261130 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945721.1
acacacaggatacacacacacacaggataatggTATCCGTAACAGCATCCGTGTCCTCGGGCTTGCTAGTGTTAAGCTGTCATTACATTAAGTTGAAGAATTTACAGTTCATCTTCAATAAAATATTGTTTTCTAGAATCCAGCCTTGCTCTCCTGGGGCTGAAAACAAGTCCTGCAATGCTGAACAGCCTTTCACAGGCAGCTGATACAGGTCAAGACAATGCCGCACAGATGGGTGCTAGGACCATGGGGCGCAGGAAGAGAACTATCTTCACCAAAGAACACCTGAAGCTTCTGCGGGTGGATTTTGATGTTGATCCCTACCCAAGCATTGCCGTGAGGGAGTGCCTATCCCAAGCCACTGGCCTAACAGAATCCCGCATTCAGGTGTGGTTTCAGAACAGGAGAGCCAGAACAATGAAGCACAGGGACCACAAAGTCTCCCCTCAGCCAGAGTCAGCTCACCCTATCCCCAGTCCTTTTCTACCTACACAGTCTTTCTCAAAACTCCTCCATGGGATCAAAGATGTGACCCACCAGGTCGACATAGAGGAAGTCTCTTATTACCAGCCGCTGAGCCACAGCCAGATGCACGAGGAGGACTGCTTCTACGGTCCCTCATCTTGTCCCCCCACCTTCCCGCTCTCTCCAGGGGATGCTGGATACAGCAGTCCCTCATTCAGTGTGGGAGTGAGACATGACAGGTTCCTGGACACTATCTCTCCAGGTGCTTTGCCAGAAGCTCAATGGTGCAACGTTGCCCAAGAGTTCCCGTTCTGCTCCCAGGGGGAGGGCCAGGACTTCCACTACTCACCTCCGTCTGGACTTCTTCATCCCCAGTACGCCCACGGCGGACTCCAGTCCGTTCGTGCCAGCAGCACCTTCGACCCGTTCTCCAGTTGCCCTGCCACACCGGACTCAGCCTGCTGGGACATAGGACTTGAGAACCCCTATCCCATAGACCAGGGTTTCCTGTACAGGGAAGTCTCCGATGAGTACTCAAGTCCTTCTGGGTACTTTGATGCTATGCAAGAAGCCCCACTACATGAACTGTCTTTCCCAGTGGCAGGACCAGTAAACACCCCTACCATATTCTAGATCTTCAATGGCAAGGGTTGCCAACACTCCAGGTTTGAATAGGTCTAGCTCTTGTGAGAAGTAGTGCTGTTCCGGGATGGTCTCAATGAAACAAATAATGAACATTTTAATTATGTCGATGGATTTataatcaatcccagaatgagTTCGGCAACATTAAGGCATACCTGAATGTATTAGCCATGTACAATAGGACTGTTGCATGAATGAACATAGCTGCTGCGTTATGTAGGGAGGTACGTTACTACTATAATATAgggttaatttatttatttttaaaacatgtattttaccaggtgagtcagttaagaaaaacacATATTTACTGGCTATAAAGGGTGTATAATATGAGTAGAATAATACATTATGTAAAATAAATTGTCAATGTATCACTATTTATTCCAAATAAACACCTACTTTGTGAA
>XM_021558777.2
GTGTCAGAGATCTATAGCAAGAAACATATCTTAGAGCCACAAGTTATTCAGTCACAGAGACTGAGGACTAGACCAAGACTAGAGAACAACTGACACAGAGCTAAACAACAGAGAAATTTCGATGGACTGCAGCTTTGGTCAAGACAATGCCGCACAGATGGGTGCTAGGACCATGGGGCGCAGGAAGAGAACTATCTTCACCAAAGAACACCTGAAGCTTCTGCGGGTGGATTTTGATGTTGATCCCTACCCAAGCATTGCCGTGAGGGAGTGCCTATCCCAAGCCACTGGCCTAACAGAATCCCGCATTCAGGTGTGGTTTCAGAACAGGAGAGCCAGAACAATGAAGCACAGGGACCACAAAGTCTCCCCTCAGCCAGAGTCAGCTCACCCTATCCCCAGTCCTTTTCTACCTACACAGTCTTTCTCAAAACTCCTCCATGGGATCAAAGATGTGACCCACCAGGTCGACATAGAGGAAGTCTCTTATTACCAGCCGCTGAGCCACAGCCAGATGCACGAGGAGGACTGCTTCTACGGTCCCTCATCTTGTCCCCCCACCTTCCCGCTCTCTCCAGGGGATGCTGGATACAGCAGTCCCTCATTCAGTGTGGGAGTGAGACATGACAGGTTCCTGGACACTATCTCTCCAGGTGCTTTGCCAGAAGCTCAATGGTGCAACGTTGCCCAAGAGTTCCCGTTCTGCTCCCAGGGGGAGGGCCAGGACTTCCACTACTCACCTCCGTCTGGACTTCTTCATCCCCAGTACGCCCACGGCGGACTCCAGTCCGTTCGTGCCAGCAGCACCTTCGACCCGTTCTCCAGTTGCCCTGCCACACCGGACTCAGCCTGCTGGGACATAGGACTTGAGAACCCCTATCCCATAGACCAGGGTTTCCTGTACAGGGAAGTCTCCGATGAGTACTCAAGTCCTTCTGGGTACTTTGATGCTATGCAAGAAGCCCCACTACATGAACTGTCTTTCCCAGTGGCAGGACCAGTAAACACCCCTACCATATTCTAGATCTTCAATGGCAAGGGTTGCCAACACTCCAGGTTTGAATAGGTCTAGCTCTTGTGAGAAGTAGTGCTGTTCCGGGATGGTCTCAATGAAACAAATAATGAACATTTTAATTATGTCGATGGATTTataatcaatcccagaatgagTTCGGCAACATTAAGGCATACCTGAATGTATTAGCCATGTACAATAGGACTGTTGCATGAATGAACATAGCTGCTGCGTTATGTAGGGAGGTACGTTACTACTATAATATAgggttaatttatttatttttaaaacatgtattttaccaggtgagtcagttaagaaaaacacATATTTACTGGCTATAAAGGGTGTATAATATGAGTAGAATAATACATTATGTAAAATAAATTGTCAATGTATCACTATTTATTCCAAATAAACACCTACTTTGTGAA
>XM_036945724.1
GTCAGAGATCTATAGCAAGAAACATATCTTAGAGCCACAAGTTATTCAGTCACAGAGACTGAGGACTAGACCAAGACTAGAGAACAACTGACACAGAGCTAAACAACAGAGAAATTTCGATGGACTGCAGCTTTGTGTGTCTATACCAGTAGGAGATTGGGCAGTGAGGAAGAGGTCAAGACAATGCCGCACAGATGGGTGCTAGGACCATGGGGCGCAGGAAGAGAACTATCTTCACCAAAGAACACCTGAAGCTTCTGCGGGTGGATTTTGATGTTGATCCCTACCCAAGCATTGCCGTGAGGGAGTGCCTATCCCAAGCCACTGGCCTAACAGAATCCCGCATTCAGGTGTGGTTTCAGAACAGGAGAGCCAGAACAATGAAGCACAGGGACCACAAAGTCTCCCCTCAGCCAGAGTCAGCTCACCCTATCCCCAGTCCTTTTCTACCTACACAGTCTTTCTCAAAACTCCTCCATGGGATCAAAGATGTGACCCACCAGGTCGACATAGAGGAAGTCTCTTATTACCAGCCGCTGAGCCACAGCCAGATGCACGAGGAGGACTGCTTCTACGGTCCCTCATCTTGTCCCCCCACCTTCCCGCTCTCTCCAGGGGATGCTGGATACAGCAGTCCCTCATTCAGTGTGGGAGTGAGACATGACAGGTTCCTGGACACTATCTCTCCAGGTGCTTTGCCAGAAGCTCAATGGTGCAACGTTGCCCAAGAGTTCCCGTTCTGCTCCCAGGGGGAGGGCCAGGACTTCCACTACTCACCTCCGTCTGGACTTCTTCATCCCCAGTACGCCCACGGCGGACTCCAGTCCGTTCGTGCCAGCAGCACCTTCGACCCGTTCTCCAGTTGCCCTGCCACACCGGACTCAGCCTGCTGGGACATAGGACTTGAGAACCCCTATCCCATAGACCAGGGTTTCCTGTACAGGGAAGTCTCCGATGAGTACTCAAGTCCTTCTGGGTACTTTGATGCTATGCAAGAAGCCCCACTACATGAACTGTCTTTCCCAGTGGCAGGACCAGTAAACACCCCTACCATATTCTAGATCTTCAATGGCAAGGGTTGCCAACACTCCAGGTTTGAATAGGTCTAGCTCTTGTGAGAAGTAGTGCTGTTCCGGGATGGTCTCAATGAAACAAATAATGAACATTTTAATTATGTCGATGGATTTataatcaatcccagaatgagTTCGGCAACATTAAGGCATACCTGAATGTATTAGCCATGTACAATAGGACTGTTGCATGAATGAACATAGCTGCTGCGTTATGTAGGGAGGTACGTTACTACTATAATATAgggttaatttatttatttttaaaacatgtattttaccaggtgagtcagttaagaaaaacacATATTTACTGGCTATAAAGGGTGTATAATATGAGTAGAATAATACATTATGTAAAATAAATTGTCAATGTATCACTATTTATTCCAAATAAACACCTACTTTGTGAA
>XM_036945725.1
AAGAAACATATCTTAGAGCCACAAGTTATTCAGTCACAGAGACTGAGGACTAGACCAAGACTAGAGAACAACTGACACAGAGCTAAACAACAGAGAAATTTCGATGGACTGCAGCTTTGTAGGAGATTGGGCAGTGAGGAAGAGGTAATTTCCCTCCCTGATACACTTCTCTTTGTCCCATTTCCATTGGCTCCCACCTTGATGTAATCATTGGGATGCCAGAGGTCAAGACAATGCCGCACAGATGGGTGCTAGGACCATGGGGCGCAGGAAGAGAACTATCTTCACCAAAGAACACCTGAAGCTTCTGCGGGTGGATTTTGATGTTGATCCCTACCCAAGCATTGCCGTGAGGGAGTGCCTATCCCAAGCCACTGGCCTAACAGAATCCCGCATTCAGGTGTGGTTTCAGAACAGGAGAGCCAGAACAATGAAGCACAGGGACCACAAAGTCTCCCCTCAGCCAGAGTCAGCTCACCCTATCCCCAGTCCTTTTCTACCTACACAGTCTTTCTCAAAACTCCTCCATGGGATCAAAGATGTGACCCACCAGGTCGACATAGAGGAAGTCTCTTATTACCAGCCGCTGAGCCACAGCCAGATGCACGAGGAGGACTGCTTCTACGGTCCCTCATCTTGTCCCCCCACCTTCCCGCTCTCTCCAGGGGATGCTGGATACAGCAGTCCCTCATTCAGTGTGGGAGTGAGACATGACAGGTTCCTGGACACTATCTCTCCAGGTGCTTTGCCAGAAGCTCAATGGTGCAACGTTGCCCAAGAGTTCCCGTTCTGCTCCCAGGGGGAGGGCCAGGACTTCCACTACTCACCTCCGTCTGGACTTCTTCATCCCCAGTACGCCCACGGCGGACTCCAGTCCGTTCGTGCCAGCAGCACCTTCGACCCGTTCTCCAGTTGCCCTGCCACACCGGACTCAGCCTGCTGGGACATAGGACTTGAGAACCCCTATCCCATAGACCAGGGTTTCCTGTACAGGGAAGTCTCCGATGAGTACTCAAGTCCTTCTGGGTACTTTGATGCTATGCAAGAAGCCCCACTACATGAACTGTCTTTCCCAGTGGCAGGACCAGTAAACACCCCTACCATATTCTAGATCTTCAATGGCAAGGGTTGCCAACACTCCAGGTTTGAATAGGTCTAGCTCTTGTGAGAAGTAGTGCTGTTCCGGGATGGTCTCAATGAAACAAATAATGAACATTTTAATTATGTCGATGGATTTataatcaatcccagaatgagTTCGGCAACATTAAGGCATACCTGAATGTATTAGCCATGTACAATAGGACTGTTGCATGAATGAACATAGCTGCTGCGTTATGTAGGGAGGTACGTTACTACTATAATATAgggttaatttatttatttttaaaacatgtattttaccaggtgagtcagttaagaaaaacacATATTTACTGGCTATAAAGGGTGTATAATATGAGTAGAATAATACATTATGTAAAATAAATTGTCAATGTATCACTATTTATTCCAAATAAACACCTACTTTGTGAA
>XM_021558792.2
TTTCGATGGACTGCAGCTTTGTGTGTCTATACCAGTAGGAGATTGGGCAGTGAGGAAGAGGTAATTTCCCTCCCTGATACACTTCTCTTTGTCCCATTTCCATTGGCTCCCACCTTGATGTAATCATTGGGATGCCAGAGGTCAAGACAATGCCGCACAGATGGGTGCTAGGACCATGGGGCGCAGGAAGAGAACTATCTTCACCAAAGAACACCTGAAGCTTCTGCGGGTGGATTTTGATGTTGATCCCTACCCAAGCATTGCCGTGAGGGAGTGCCTATCCCAAGCCACTGGCCTAACAGAATCCCGCATTCAGGTGTGGTTTCAGAACAGGAGAGCCAGAACAATGAAGCACAGGGACCACAAAGTCTCCCCTCAGCCAGAGTCAGCTCACCCTATCCCCAGTCCTTTTCTACCTACACAGTCTTTCTCAAAACTCCTCCATGGGATCAAAGATGTGACCCACCAGGTCGACATAGAGGAAGTCTCTTATTACCAGCCGCTGAGCCACAGCCAGATGCACGAGGAGGACTGCTTCTACGGTCCCTCATCTTGTCCCCCCACCTTCCCGCTCTCTCCAGGGGATGCTGGATACAGCAGTCCCTCATTCAGTGTGGGAGTGAGACATGACAGGTTCCTGGACACTATCTCTCCAGGTGCTTTGCCAGAAGCTCAATGGTGCAACGTTGCCCAAGAGTTCCCGTTCTGCTCCCAGGGGGAGGGCCAGGACTTCCACTACTCACCTCCGTCTGGACTTCTTCATCCCCAGTACGCCCACGGCGGACTCCAGTCCGTTCGTGCCAGCAGCACCTTCGACCCGTTCTCCAGTTGCCCTGCCACACCGGACTCAGCCTGCTGGGACATAGGACTTGAGAACCCCTATCCCATAGACCAGGGTTTCCTGTACAGGGAAGTCTCCGATGAGTACTCAAGTCCTTCTGGGTACTTTGATGCTATGCAAGAAGCCCCACTACATGAACTGTCTTTCCCAGTGGCAGGACCAGTAAACACCCCTACCATATTCTAGATCTTCAATGGCAAGGGTTGCCAACACTCCAGGTTTGAATAGGTCTAGCTCTTGTGAGAAGTAGTGCTGTTCCGGGATGGTCTCAATGAAACAAATAATGAACATTTTAATTATGTCGATGGATTTataatcaatcccagaatgagTTCGGCAACATTAAGGCATACCTGAATGTATTAGCCATGTACAATAGGACTGTTGCATGAATGAACATAGCTGCTGCGTTATGTAGGGAGGTACGTTACTACTATAATATAgggttaatttatttatttttaaaacatgtattttaccaggtgagtcagttaagaaaaacacATATTTACTGGCTATAAAGGGTGTATAATATGAGTAGAATAATACATTATGTAAAATAAATTGTCAATGTATCACTATTTATTCCAAATAAACACCTACTTTGTGAA
>TU151849
taacataactcatgtaaATTATAATTGTAACAAAGTGAatgtgaacgaaataaccacgacaacCGAAATaataccgtcaaactcagggtttatttataaacacacggtaatggggggagcaggaaaaaggggctgagctggacccaaggaaagaaacaataaatatacaaaaacacccctaagttagactagcctactttaataacagctaactaactaaccaaaaatacagtgggtggtccgcccagttctaactagtgtgtttaacaaagtttacctacgggtagtgtatgcccatgggcgacttgtcttggtttcccccttttcccaccagcaacaaacaccataaccaaaacaatactcacaggagaTGACAAAGTGATTTGGAGGTGCTCCAACAAAAGGAAAGGTTAATTAATACACAGAGAGCGAGCGAAGAACAGAGATCTACAAACATGGCATTTAACAAAGAGATTGAGCTACTGAAATCTATGAAGAACAGAGATCTATCAACATGGCATTACAAAGAGATTGAGCTACTGAGCAAACaaatgatggggtttttaaaccatggggaaggaactgtgatagggtaggaaacaggaggaggtgtgtcttctgattgatgggttgattgttgactgattggggagtgatgatgttCACCTgtgagggaagacagagagaaaagaaacacacaggatacacacacacacaggataatggTATCCGTAACAGCATCCGTGTCCTCGGGCTTGCTAGTGTTAAGCTGTCATTACATTAAGTTGAAGAATTTACAGTTCATCTTCAATAAAATATTGTTTTCTAGAATCCAGCCTTGCTCTCCTGGGGCTGAAAACAAGTCCTGCAATGCTGAACAGCCTTTCACAGGCAGCTGATACAGGTAAGGATGCGTTTAACCTCAGAGACAGCTTACAGACTGCCGGGAAGGACATGAGCAACTCCATATGATCAGCTGAACAGGCCAGGTATTTGTCCAGCTGTTTGGAGCTTTCTTATGCTTGAGATGTTTGCATGGCAGAGAAGTCATCCTCATCTGATGAACTGGTGCCATAACCCAGCTGCAGAAAGGGTTCTTCCAGGTGGTCCTTGATGTATAGTTGCAGCTTGTACCTCGTTGGGTTTCTCATGTAGACTGGTCGCCAGCGCATAGTCCTCGAATTCATCCCTGAAGTTGTTCCAATTAGTATTCCAGTCCC
>TU151846
ACTTCTTCATCCCCAGTACGCCCACGGCGGACTCCAGTCCGTTCGTGCCAGCAGCACCTTCGACCCGTTCTCCAGTTGCCCTGCCACACCGGACTCAGCCTGCTGGGACATAGGACTTGAGAACCCCTATCCCATAGACCAGGGTTTCCTGTACAGGGAAGTCTCCGATGAGTACTCAAGTCCTTCTGGGTACTTTGATGCTATGCAAGAAGCCCCACTACATGAACTGTCTTTCCCAGTGGCAGGACCAGTAAACACCCCTACCATATTCTAGATCTTCAATGGCAAGGGTTGCCAACACTCCAGGTTTGAATAGGTCTAGCTCTTGTGAGAAGTAGTGCTGTTCCGGGATGGTCTCAATGAAACAAATAATGAACATTTTAATTATGTCGATGGATTTataatcaatcccagaatgagTTCGGCAACATTAAGGCATACCTGAATGTATTAGCCATGTACAATAGGACTGTTGCATGAATGAACATAGCTGCTGCGTTATGTAGGGAGGTACGTTACTACTATAATATAgggttaatttatttatttttaaaacatgtattttaccaggtgagtcagttaagaaaaacacATATTTACTGGCTATAAA

Function

NR:

description
diencephalon/mesencephalon homeobox protein 1-like isoform X2

GO:

id name namespace
GO:0002009 morphogenesis of an epithelium biological_process
GO:0007369 gastrulation biological_process
GO:0003677 DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945721.1 False 1523 mRNA 0.47 3 31256517 31261130
XM_021558777.2 False 1449 mRNA 0.47 3 31258962 31261130
XM_036945724.1 False 1486 mRNA 0.47 4 31258964 31261130
XM_036945725.1 False 1536 mRNA 0.47 4 31258980 31261130
XM_021558792.2 False 1452 mRNA 0.48 4 31259078 31261130
TU151849 False 1220 lncRNA 0.44 1 31255824 31257043
TU151846 True 610 lncRNA 0.55 1 31260432 31261041

Neighbor

gene id symbol gene type direction distance location
LOC110486889 NA coding upstream 34438 31208985 ~ 31222079 (+)
sri sorcn coding upstream 54125 31199335 ~ 31202392 (+)
LOC110486784 NA coding upstream 110063 31136808 ~ 31146454 (+)
LOC110534689 LOC106605368 coding upstream 365131 30873733 ~ 30891386 (+)
LOC110534679 LOC106605381 coding upstream 400471 30851297 ~ 30856046 (+)
LOC110534710 LOC106605356 coding downstream 924 31262054 ~ 31294577 (+)
LOC110486933 can7 coding downstream 38872 31300002 ~ 31315913 (+)
eaf1 LOC106581241 coding downstream 99278 31360408 ~ 31366322 (+)
LOC110486995 atg5 coding downstream 328344 31589474 ~ 31624014 (+)
LOC110534719 LOC106605346 coding downstream 580608 31841738 ~ 31857595 (+)
G131815 NA non-coding upstream 4048 31252258 ~ 31252469 (+)
G131813 NA non-coding upstream 6684 31249619 ~ 31249833 (+)
G131794 NA non-coding upstream 27939 31228173 ~ 31228578 (+)
G131782 NA non-coding upstream 48282 31207976 ~ 31208235 (+)
G131777 NA non-coding upstream 60794 31195378 ~ 31195723 (+)
G131835 NA non-coding downstream 34567 31295697 ~ 31295995 (+)
G131847 NA non-coding downstream 74152 31335282 ~ 31388272 (+)
G131886 LOC106584099 non-coding downstream 133959 31395089 ~ 31395472 (+)
G131899 NA non-coding downstream 170188 31431318 ~ 31431552 (+)
G131517 ccne2 other upstream 506563 30748055 ~ 30749954 (+)
G131491 NA other upstream 555894 30700182 ~ 30700623 (+)
G130414 NA other upstream 1466686 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 1562666 29685855 ~ 29697686 (+)
G130308 NA other upstream 1615421 29600026 ~ 29641096 (+)
G132342 LOC100136303 other downstream 596518 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 1906308 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 2235324 33496454 ~ 33497285 (+)

Expression


Co-expression Network