LOC110534719 (LOC106605346)


Basic Information

Item Value
gene id LOC110534719
gene name LOC106605346
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31841738 ~ 31857595 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945737.1
CCATGGCTACTAACGCATGCAGTCTGTATTAACTCCAGTTGGGGGCGAACATTTCAAAGATTTGTGCAGTGAACACATCATCACTCTAGCAAAATGTGTGGATAGAGCGGTGGATAGAAGGTACCCATCCAGTTACTTCTACAAAACGTATTTCACAGCCGGAGATTTACGATTATGAAAACATGGTCGTAAAAACTAGAAAACAAAACGTGAAGGATCAACCGCCGCAGCCCAACGTCGACGACAGAGACAGGAATCCGTTCGTATCGCCAGGCACCGGGAAAAGTAGACGAGCAGGAAAGGGCACCCCTTTCAACAGCTTGCTTCACAATAAGAATGGACTATTTCCAGGGTTTTCATTCATCAGAAGTAAGCTTGGCCTTACTCCGTCAGCTTTTGTGAAACTCGGAATTACTCTGGTTCTTGCTGCTCTGGCTGGGTATTTACATTGGTACCATCTCTCACGCCTCTTTGAAAATGACAGGCACTTCTCACATCTGTCAGGGCTGGAAAAGGAAATGGCATTTCGGACAGAAATGGGTTTATACTACTCCTACTTCAAGACCATCATTGAGGCCCCAACCTTTATCAACGGCCTGTATCTGGTCATGAACGATCGGCTTACAGAGTACCCACTGGTTATAAACACACTGAAGAGGTTCAATCTCTATCCAGAGGTGGTCCTGGCCAGCTGGTACAGAATCTACACAGATATAATGGAATTCTTTGGACTCCCCACCAAGATGTGTTGGTCCAtcaatagaggagagggtatggcTGCAGTGGACGGCTGTGAAGgtatGGGTGACCCTGCATATTTCTACGTGACCTTTGTGTTCCTCCTCAATGGTCTGATGATGAGTCTGTTCTTCATCTACGGGACCTACCTCAGTGGCAGTCGGCTTGGGGGTATGGTCACGGTGCTGTGTTTCTTCTTCAACCATGGAGAGAGCACCCGGGTCATGTGGACTCCGCCCCTGAGGGAGAGCTTCTCCTATCCCTTCCTGGTCCTGCAGATGTTACTCCTCACCCACATCCTCCGGACACGCAACCCCAGCAGAAAGGCCATGTGGGCGTTGGCCATCTCCAATTTGTGCTTCATGCTGCCCTGGCAGTTTGCCCAGTTTGTGCTGCTTACCCAGGTGGCCTCGCTCTTTGCCTCGTACATCCTGGGATACATAAGCCCCACCAAAATGCAGTCCCTCCTAGTGACACACATGATAACACTTGCCGTGTGCTTTGTTCTGATGTTTGGAAACTCCATGCTGCTGACATCATTCTACGCCTCCTCACTGGTCTCCATTTGGGGAATAATTGCCCTGCGGGACAAATTTGCAGAAACCTTCAAACCTGGCCTCATCACATGgGTCATGCAGGGCCTGGTATGTGTTGTCTCCACGGTCATTCTCAAGTTCATGCTGTCAGCTGTCTTTGGAGCCTCTGATGATGCTCACATCAGTAGCTTAATAAAGTCCAAGTTTACCAGCTACAAGGACTTTGACACCATGATGTATACCTGTGCTGCTGAGTTTGACTTCATGGAAATTGAGACCCCACTGCGCTACATCAAGACACTGCTGCTTCCCATCAACATGCTGGTGGTTGCTGTCATAGCAGGACGGACCATCCAGGATGTTGTGAGGTtcctgagggaaggagagaagtatTCTGTCAAACCTGAAGACGATGATGACGATGAACACCCAGAAATGTTGGCAAAAGGAGAGttgTTTGGCTGGATAGGGGAGAAGTTCAAGCTCCACGTGATGGTGTTTGGCATCCTGTCCATCATGGCCATGCAGGGTGCGGCCAACCTGCAGGCCCAGTGGGGCATCATGGGAGAATTCAGCAACCTACCCCAGGAGCAGCTGCTGGACTGGATCAGAGACAACACACCGCCCAACTCTGTGTTTGCTGGAGCCATGCCCACCATGGCCAGTGTGAAGCTGTCAGCCGGCCGGCCCATCGTCAACCACCCACATTACGAGGACGCTGGACTGAGGGAGAGGACTAAGCTGGTGTATGCCATGTATAGCCGCAAGTCTGCCGAGGTGGTGAAGAGGAACCTGATGCAGATGGAGGTGGACTACTTTGTCCTGGAGGACTCGTGGTGCACCCGGCGCTCCAGGCCTGGCTGCAGTATGCCTGAGATCTGGGATGTGGAGGACCCTCAGAATGCTGGGAAAGTCCCCctctgtactctcatgtccaggGACTCCAGGCCCCACTTTGCCACCGTTTTTCACAACAACGTTTACAAAGTTCTAAAAGTTCCCAAAGCAGCTAAAGAGCTCAGATAACAGCAGGGTTGGCCTGTTTTTGGTGCTACCGTCTAGTATTTCCACCAGCCTGGTGCGTGTTTTTATATAGTTCCCTTTCCTGTTGGTCTGTCTCCTTTGGAGGTGCCACAGCTGCGTTTTACGTCTCCCTTTTTGAGGCTCTGTTAGAGCAGTGGACTGACGTGATGGGCTAGATAAGAGTCCCCACTTGTGTTGTGTAAGCATTTCATTTTATGCGAGGTTATACTAAAAGTTGTTCTTAAAGATAGACATGCATtttatttgtgtgtattagtACATTTTGGATGTCGGGCATATTTAGTTTTTGTACTTTTATGCCCTTTTTGCATATTAAGAATTGTCATTATTTAGTGTAATTTTTTTGATTCAGTGATGTGTGTAATAATTTTGTTATTTGCCAAAGCAAAGTGTAGTTAGTATAACTACTAGTGTTACAGCTGCAAGTGTCAGCTTAATGTAGCACACCTGAAATGTCCTTTTTAAGAGAAGCGGAATATGATAATCTGCAAACAGATTTTTCCCAACAACCTATTGCAACTTGTAGCAGTGCATTATTTTAAGCATTAGCGTAATGACCTACCACCATATATCAGTGGTTTAGGACCCTGTATTGACATACAGAAAACACTAGGCATCTTTTTGGAGTTGTTAAAGTCATGCCAATTTAGCGTCATTGCTTTGTAGTCCACCACAGGAAGTTACGTCATTCATTTGTAGCCTTTTTTTGCACCTCAGTGGCCTTTgcacatgtcacaacagcaacatAATTGAATTCAACAATGTATTATGACAACAACAAAACCATTTAGTTTAATGATTTGAGTTGTAATGTGGTTACTTCCCCATTTTATTTTGGGGATATAGCTGTGAAAGACTACGCCACTCTGGACTCCACTTTGCACTGGTGTGCTCTACTCTCTTAAAACCACTTTCCCCTTTTGTTCATGCAGCTCTGAGTTGTGACTGTGAAAGTCCCTTTGCCACTCTGAGGTCAAGGGTCAAACAGGAGAGTGCTCCAGAGCTCCACTTAACTGGAGTGTCGTTCTCATTATCCCTGTGACTCATTCTGCCTTTTTACCAGTGTGGCTTTGAAGTTACTTAACAACCCCAGTGTAATCATTCCAGTGTAAAAGCTACAGTATTGTTGGGTACAAATCATCTCACCAATACAGGTGAGGCATTTTAGCAATAAGCTGTTCGTTACTCAGACTTGAAGGTTTCTACATATTATACAACATTCATCAATTGTAATAGTTTCAAGCAGCGTTTTCAATTAAATGCAAGAAGTTTATTTCAATGTATTCTGCTATTTCTGTGACTGTTCATGAATAGCACAGCAAGTCTTTTATGCTAAGTTTATTTTTGGTTATGTCCAAGATATACAGTAAGGTACTGAAGTAATCTTGAAAGCAAAATGCCTGTTTATAGTGGTGGAGCGGTGACCACACAATTTGAAATATTTTGACATCAACATTTCTTGTGACAGGCCTAGCTTTGTCTAATGCTTGTTGATTTCATCTGtattttgaaaataaaatgtttatcaGCA
>XM_036945736.1
CATGGCTACTAACGCATGCAGTCTGTATTAACTCCAGTTGGGGGCGAACATTTCAAAGATTTGTGCAGTGAACACATCATCACTCTAGCAAAATGTGTGGATAGAGCGGTGGATAGAAGGTACCCATCCAGTTACTTCTACAAAACGTATTTCACAGCCGGAGATTTACGATTATGAAAACATGGTCGTAAAAACTAGAAAACAAAACGTGAAGGATCAACCGCCGCAGCCCAACGTCGACGACAGAGACAGGAATCCGTTCGTATCGCCAGGCACCGGGAAAAGTAGACGAGCAGGAAAGGGCACCCCTTTCAACAGCTTGCTTCACAATAAGAATGGACTATTTCCAGGGTTTTCATTCATCAGAAGTAAGCTTGGCCTTACTCCGTCAGCTTTTGTGAAACTCGGAATTACTCTGGTTCTTGCTGCTCTGGCTGGGTATTTACATTGGTACCATCTCTCACGCCTCTTTGAAAATGACAGGCACTTCTCACATCTGTCAGGGCTGGAAAAGGAAATGGCATTTCGGACAGAAATGGGTTTATACTACTCCTACTTCAAGACCATCATTGAGGCCCCAACCTTTATCAACGGCCTGTATCTGGTCATGAACGATCGGCTTACAGAGTACCCACTGGTTATAAACACACTGAAGAGGTTCAATCTCTATCCAGAGGTGGTCCTGGCCAGCTGGTACAGAATCTACACAGATATAATGGAATTCTTTGGACTCCCCACCAAGATGTGTTGGTCCAtcaatagaggagagggtatggcTGCAGTGGACGGCTGTGAAGgtatGGGTGACCCTGCATATTTCTACGTGACCTTTGTGTTCCTCCTCAATGGTCTGATGATGAGTCTGTTCTTCATCTACGGGACCTACCTCAGTGGCAGTCGGCTTGGGGGTATGGTCACGGTGCTGTGTTTCTTCTTCAACCATGGAGAGAGCACCCGGGTCATGTGGACTCCGCCCCTGAGGGAGAGCTTCTCCTATCCCTTCCTGGTCCTGCAGATGTTACTCCTCACCCACATCCTCCGGACACGCAACCCCAGCAGAAAGGCCATGTGGGCGTTGGCCATCTCCAATTTGTGCTTCATGCTGCCCTGGCAGTTTGCCCAGTTTGTGCTGCTTACCCAGGTGGCCTCGCTCTTTGCCTCGTACATCCTGGGATACATAAGCCCCACCAAAATGCAGTCCCTCCTAGTGACACACATGATAACACTTGCCGTGTGCTTTGTTCTGATGTTTGGAAACTCCATGCTGCTGACATCATTCTACGCCTCCTCACTGGTCTCCATTTGGGGAATAATTGCCCTGCGGGACAAATTTGCAGAAACCTTCAAACCTGGCCTCATCACATGgGTCATGCAGGGCCTGGTATGTGTTGTCTCCACGGTCATTCTCAAGTTCATGCTGTCAGCTGTCTTTGGAGCCTCTGATGATGCTCACATCAGTAGCTTAATAAAGTCCAAGTTTACCAGCTACAAGGACTTTGACACCATGATGTATACCTGTGCTGCTGAGTTTGACTTCATGGAAATTGAGACCCCACTGCGCTACATCAAGACACTGCTGCTTCCCATCAACATGCTGGTGGTTGCTGTCATAGCAGGACGGACCATCCAGGATGTTGTGAGGTtcctgagggaaggagagaagtatTCTGTCAAACCTGAAGACGATGATGACGATGAACACCCAGAAATGTTGGCAAAAGGAGAGCTGGTGTACCATAGCCTACAGTTGATAGCGTTTGTAGTGCTGGCAATGCTCATCATGCGTCTCAAGCTCTTCCTCACGCCCCACATGTGCATCATGGCCTCCTTGATCTGCTCCAAACAGttgTTTGGCTGGATAGGGGAGAAGTTCAAGCTCCACGTGATGGTGTTTGGCATCCTGTCCATCATGGCCATGCAGGGTGCGGCCAACCTGCAGGCCCAGTGGGGCATCATGGGAGAATTCAGCAACCTACCCCAGGAGCAGCTGCTGGACTGGATCAGAGACAACACACCGCCCAACTCTGTGTTTGCTGGAGCCATGCCCACCATGGCCAGTGTGAAGCTGTCAGCCGGCCGGCCCATCGTCAACCACCCACATTACGAGGACGCTGGACTGAGGGAGAGGACTAAGCTGGTGTATGCCATGTATAGCCGCAAGTCTGCCGAGGTGGTGAAGAGGAACCTGATGCAGATGGAGGTGGACTACTTTGTCCTGGAGGACTCGTGGTGCACCCGGCGCTCCAGGCCTGGCTGCAGTATGCCTGAGATCTGGGATGTGGAGGACCCTCAGAATGCTGGGAAAGTCCCCctctgtactctcatgtccaggGACTCCAGGCCCCACTTTGCCACCGTTTTTCACAACAACGTTTACAAAGTTCTAAAAGTTCCCAAAGCAGCTAAAGAGCTCAGATAACAGCAGGGTTGGCCTGTTTTTGGTGCTACCGTCTAGTATTTCCACCAGCCTGGTGCGTGTTTTTATATAGTTCCCTTTCCTGTTGGTCTGTCTCCTTTGGAGGTGCCACAGCTGCGTTTTACGTCTCCCTTTTTGAGGCTCTGTTAGAGCAGTGGACTGACGTGATGGGCTAGATAAGAGTCCCCACTTGTGTTGTGTAAGCATTTCATTTTATGCGAGGTTATACTAAAAGTTGTTCTTAAAGATAGACATGCATtttatttgtgtgtattagtACATTTTGGATGTCGGGCATATTTAGTTTTTGTACTTTTATGCCCTTTTTGCATATTAAGAATTGTCATTATTTAGTGTAATTTTTTTGATTCAGTGATGTGTGTAATAATTTTGTTATTTGCCAAAGCAAAGTGTAGTTAGTATAACTACTAGTGTTACAGCTGCAAGTGTCAGCTTAATGTAGCACACCTGAAATGTCCTTTTTAAGAGAAGCGGAATATGATAATCTGCAAACAGATTTTTCCCAACAACCTATTGCAACTTGTAGCAGTGCATTATTTTAAGCATTAGCGTAATGACCTACCACCATATATCAGTGGTTTAGGACCCTGTATTGACATACAGAAAACACTAGGCATCTTTTTGGAGTTGTTAAAGTCATGCCAATTTAGCGTCATTGCTTTGTAGTCCACCACAGGAAGTTACGTCATTCATTTGTAGCCTTTTTTTGCACCTCAGTGGCCTTTgcacatgtcacaacagcaacatAATTGAATTCAACAATGTATTATGACAACAACAAAACCATTTAGTTTAATGATTTGAGTTGTAATGTGGTTACTTCCCCATTTTATTTTGGGGATATAGCTGTGAAAGACTACGCCACTCTGGACTCCACTTTGCACTGGTGTGCTCTACTCTCTTAAAACCACTTTCCCCTTTTGTTCATGCAGCTCTGAGTTGTGACTGTGAAAGTCCCTTTGCCACTCTGAGGTCAAGGGTCAAACAGGAGAGTGCTCCAGAGCTCCACTTAACTGGAGTGTCGTTCTCATTATCCCTGTGACTCATTCTGCCTTTTTACCAGTGTGGCTTTGAAGTTACTTAACAACCCCAGTGTAATCATTCCAGTGTAAAAGCTACAGTATTGTTGGGTACAAATCATCTCACCAATACAGGTGAGGCATTTTAGCAATAAGCTGTTCGTTACTCAGACTTGAAGGTTTCTACATATTATACAACATTCATCAATTGTAATAGTTTCAAGCAGCGTTTTCAATTAAATGCAAGAAGTTTATTTCAATGTATTCTGCTATTTCTGTGACTGTTCATGAATAGCACAGCAAGTCTTTTATGCTAAGTTTATTTTTGGTTATGTCCAAGATATACAGTAAGGTACTGAAGTAATCTTGAAAGCAAAATGCCTGTTTATAGTGGTGGAGCGGTGACCACACAATTTGAAATATTTTGACATCAACATTTCTTGTGACAGGCCTAGCTTTGTCTAATGCTTGTTGATTTCATCTGtattttgaaaataaaatgtttatcaGCA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K24553 DPY19L; C-mannosyltransferase DPY19L

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945737.1 False 3849 mRNA 0.46 21 31841738 31857595
XM_036945736.1 True 3968 mRNA 0.46 22 31841739 31857595

Neighbor

gene id symbol gene type direction distance location
LOC110486995 atg5 coding upstream 217724 31589474 ~ 31624014 (+)
eaf1 LOC106581241 coding upstream 475416 31360408 ~ 31366322 (+)
LOC110486933 can7 coding upstream 525825 31300002 ~ 31315913 (+)
LOC110534710 LOC106605356 coding upstream 547161 31262054 ~ 31294577 (+)
mxtx2 NA coding upstream 580608 31255824 ~ 31261130 (+)
LOC110487037 LOC106605342 coding downstream 56085 31913680 ~ 31933154 (+)
LOC110487045 LOC106581064 coding downstream 84371 31941966 ~ 31974601 (+)
LOC110487089 LOC106581052 coding downstream 127764 31985359 ~ 31987549 (+)
LOC110534747 LOC106605338 coding downstream 130089 31987684 ~ 32027099 (+)
LOC110487062 LOC106605340 coding downstream 198924 32056519 ~ 32063386 (+)
G132014 NA non-coding upstream 144658 31696846 ~ 31697080 (+)
G132012 NA non-coding upstream 145446 31696060 ~ 31696292 (+)
G132011 NA non-coding upstream 146289 31695190 ~ 31695449 (+)
G132004 NA non-coding upstream 159043 31681888 ~ 31682695 (+)
G132002 NA non-coding upstream 172313 31669214 ~ 31669425 (+)
G132402 NA non-coding downstream 45445 31903040 ~ 31903689 (+)
G132407 NA non-coding downstream 55361 31912956 ~ 31913253 (+)
G132413 NA non-coding downstream 76362 31933957 ~ 31934251 (+)
G132416 NA non-coding downstream 79529 31937124 ~ 31937342 (+)
G132417 NA non-coding downstream 81600 31939195 ~ 31939419 (+)
G131517 ccne2 other upstream 1091784 30748055 ~ 30749954 (+)
G131491 NA other upstream 1141115 30700182 ~ 30700623 (+)
G130414 NA other upstream 2051907 29789576 ~ 29789831 (+)
G132342 LOC100136303 other downstream 53 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 1309843 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 1638859 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 1956438 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 2104822 33962417 ~ 33962658 (+)

Expression


Co-expression Network