LOC110487180 (mcl-1)


Basic Information

Item Value
gene id LOC110487180
gene name mcl-1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 32427587 ~ 32429982 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021559104.2
CCGCACCAGACTCACTGTTGTAGTTAGCAGTCAACGATGGGTGATATTTGAGCAACAAAGTAGCTAACCGCTAGCTTTTCGTAAAATAACAGCTAGAagtgtatattttatttatttatcaaacGCTTGTTTCTTTATCTAAACGTTAAGCCAAGATGAGTCTGTCGAAGTCGATTGCACGAGCCACAACTACGATGTTGCATTTTCAAAATGGAGGATCTTCGTACCTAGCTGATGATGCTAGCCCTTTGTACTATTTCGACGGGGCCGTATGTGCTGCGGCGTCACCGAAGTCTAAAGTGGACTTGGGAAATGGGACCGGCGATACTCCACCACGACCCACGACGTTAGGAGTGAATGTCGTGAAAAGCAACGTCCTCGATAATCATTTGTCAGACCGAAGCAACAATGACGATTCTTTGCCCTGCACTCCTCAGATGGCGTCAGAATGTGGGCCTGAACTATCGAATTGTCCATCGGGCGATGAAGTATTGGAACATGATATCAGACAACTCATTGAGAATTTTTTGGGGGACTACACAGGACTGTCTCAGCCTCGATGGAAGCAAAGCAAGCCTCTTACGACCATGAAGCGAGTGGTGGAGGACGTAATAGCAAAGCACCGATATGCATACAAGGgtATGGTCGTCAAACTTGACCTGGATGATCGATGCGATGACATGAGCGTCGTCAATTCTGTGGCCAAGACCATGTTCAGTGATGGGATCACGAACTGGGGTCGCATCGCCAGCCTGGTGGCATTTGGCGCAGTGGTGAGCCAGCACCTGAAGGAGAGTGGCAGGGGACACTGCGTTGATTTGGTGGGCCAAGAGATTGCCACATACCTCCTCTCTGACCAAAGGGACTGGCTGGTCAAAAACAATGCTTGGGATGGATTTGTAGAGTTCTTTCATGTTCAAGATCCTGAGTCCTCGGTAAGGAACACCCTCCTAGCCTTTGCTGGAGTTGCTGGGATTGGGGCAACACTTGCCATGTTGATCAGGTGAATTGAACAATACTTACCTGTTACTTTTTTCAACGAAGAAAATGGACTATGCCCGCAAGTTCTCTGAAATCCTTGACAGCACCATGGTTGGAATGAGTACCCAGTGATGTCCTGCTTAGTCAAAGAAGAGGGTCAGTCTGTTGGATTATAGTGATGGACTGAATTGGGACGGTGCTTTGGTGTCAAGCTCAAGTTTGCTTTTTTCCCCGCATCAACATTTTGGTGCCTTTTTTTATTTGAGGGGTCATTTGAGGATATTTGGTAACAGTCTCCAAATATATTCATCTGACTTCTTAAATATAATGGACTTGTTAAATGGCGCTTTTATTTAATGTAAAAAGTACagacattttatttttgtaataaatGTATAGTTGAATTTAGACTCGTACAAAGTTAATTCATCTGCAAACTGTCAACTCTCTTTTTAAGTAATCAAGATGGAAAAGCACTAGCTAATAGCTATAATTCACAATGGCAAAGTTCTGCCTCTGACCATAAATTTGGCTCAAATGACTTGTTTCTAGTCCTTGTGATATTAGTCATACATGTACATACAGGGATTGGTGTAAGAAAGGCAGAACCTGCATTGAACTGACCACTGAGGGCCTTAGAATTCAACTAAGAAGGTATACCCAGGTTATGGGCATTGACAATGGAAAGTGCTTACAGCAGAAAGGATTTATTTTATATGCAATGAATTGCCTTAGGGTCTTTATGACATGCATGTATGTCATAAAGCCCCTATCTCCCCTACACCACATTCATAAGTCCTTATTCCTGTTCCTTGGGGTAGATTTTCCAGTCTTGCCTGGCAATGCATGTGTGTGGTTGCAATGTGACTTCCTGGTTAATGAAATCTTGTGACTGTTGCACTAGGCTTTActgggagggggaaggggggacCTGTTTGAAAGTCAATTGAAAATTCCATTCTCAAGACTATGCTGATTTGTATTTGAAGTGTTTCATTTCCAAATTATTGCTGGCAAATTCCTGTAATCTCCTGAAGTTAAATGATTTAAAGGATAAAATCATGCAACTTTATTCACTTTTGTGACTGCAATGAATAAAGGATGTGACTTTA

Function

NR:

description
induced myeloid leukemia cell differentiation protein Mcl-1 homolog

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021559104.2 True 2093 mRNA 0.43 3 32427587 32429982

Neighbor

gene id symbol gene type direction distance location
LOC110487143 tmod4 coding downstream 39705 32374622 ~ 32387882 (-)
lysmd1 LOC106605332 coding downstream 56636 32368622 ~ 32370951 (-)
LOC110487106 LOC106605335 coding downstream 209417 32095531 ~ 32218170 (-)
LOC110487099 NA coding downstream 352451 32068818 ~ 32075136 (-)
LOC110487053 LOC106605337 coding downstream 371349 32027226 ~ 32056238 (-)
ensab ensa coding upstream 2485 32430455 ~ 32441999 (-)
LOC110487241 LOC106605328 coding upstream 59622 32489604 ~ 32497994 (-)
ctsk catk coding upstream 68821 32498803 ~ 32505857 (-)
rrnad1 cl026 coding upstream 162681 32592663 ~ 32597152 (-)
LOC110487305 LOC106605321 coding upstream 202997 32632979 ~ 32640545 (-)
G133061 NA non-coding downstream 2248 32424236 ~ 32425339 (-)
G133105 NA non-coding downstream 14247 32412999 ~ 32413340 (-)
G133101 NA non-coding downstream 19506 32406909 ~ 32408081 (-)
G133100 NA non-coding downstream 21570 32405373 ~ 32406017 (-)
G133099 NA non-coding downstream 28169 32398230 ~ 32399418 (-)
G133113 NA non-coding upstream 22659 32452641 ~ 32452849 (-)
G133114 NA non-coding upstream 23737 32453719 ~ 32453947 (-)
G133115 NA non-coding upstream 24658 32454640 ~ 32455116 (-)
G133118 NA non-coding upstream 29164 32459146 ~ 32459377 (-)
LOC110486999 prdm1 other downstream 778792 31631886 ~ 31648795 (-)
G132197 NA other downstream 884578 31536047 ~ 31543009 (-)
LOC110486868 LOC106605361 other downstream 1228775 31196917 ~ 31199241 (-)
LOC110486852 LOC106605360 other downstream 1231295 31192419 ~ 31196292 (-)
trnae-cuc LOC106605367 other downstream 1528023 30897026 ~ 30899564 (-)
LOC110514821 NA other upstream 308847 32738829 ~ 32756992 (-)
G134102 NA other upstream 318226 32748208 ~ 32788121 (-)
LOC110487618 LOC100380645 other upstream 782682 33208500 ~ 33225125 (-)
G134668 NA other upstream 1435506 33865488 ~ 33865937 (-)
G135575 NA other upstream 2174233 34604215 ~ 34604478 (-)

Expression


Co-expression Network