LOC110487447 (LOC106605310)


Basic Information

Item Value
gene id LOC110487447
gene name LOC106605310
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 32896415 ~ 32939810 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021559388.2
tctcctcctctcaatcCACAATCTGCGACGACAGACCCTCCCCCGATGGATGCGGCTGAAACCAATGCACTGAAGTTGTGAAGTTATGCTACTGCTCTTTCTTCACTGACTTCATCTGGAACTCATTTTTCACCGCTGGAAATTTGTTATAATATCTTGAGGTAGCCTACTTTGAGATCGCAAATACAGTGGATTAACAACAAATGCTTTTCACCCAGgACCATGCAGTCACTGCAGACCTGTACCGTCCTGCTGGTTCTGAGCGTTCTGATTGGCCTGTCCTGGTCTCTGAACCCCAGGGACCCCAACGTGTGTAGCCTATGGGAGAGCTTCACAACCTCAGTGAAGGAGTCGTATGCCCACCCTTAtgaccaggtgacagaggaaCCTTGCTCTGAGCCACGCACCTCCTACAGATGCACCCGTCACAGGATCACCTATAAGACAGCATACAGACAGGCGGTGAAGATGGACTACCGCCGGAGGTACCAGTGTTGCCCTGGCTACTACGAGAGCAGAGACAACTGTGTCCCCCGCTGTACTAAGGAGTGTGTCCATGGGAGATGTGTTGCTCCAGACCGCTGCCAGTGTGAGGGAGGCTGGCGTGGCGACGACTGCTCCAGTGCCTGCGATGACCAACACTGGGGTCCAGGTTGTGGTCAGCTGTGTAAGTGTGAGAACGGTGGCCTGTGCAATCCTGTGACCGGTACCTGCCAGTGTCCTCCAGGCTACATTGGGCGCCGCTGCGAGGACCCCTGCCCACCAGGCACCTTTGGCAAGGGCTGTCTTCAGAAGTGCCAGTGTGGAACTGGGGGTTCCTGCAATAAAGTGACCGGAGAGTGCCTGTGTCGAGAAAATTTCACTGGGACATTCTGTGAGAAGGCATGCCCAAGGAGTCGATGCCCGCTGCGATGCCCGTGCCAGAATGGGGGAATCTGCCAGGGGAAGGGGATCTGTGCGTGCCCCCCTGGGTGGACGggTGAGGTGTGTACAGAGCGCTGTGCAGAGGGCAGGTTTGGTCCTAACTGTGCCAACGAGTGTGTGTGTCACAACCGGGGCCACTGCGACCCTGAGACAGGCCATTGCCAGTGTGCTGAAGGCTTCACtggaaacagGTGCAGCGAGGAGTGCCGGGTGGGTAGTTACGGGCGGGACTGTAAGGGTGTGTGCGACTGTGCCAACGGGTCTCGCTGCTATAACATAGACGGAGGCTGTCTGTGTGAGCCTGGCTTCAGTGGACCCCAGTGCAGAGAGAGGATGTGTAGGCACGGCACCTACGGCCTTCAATGTGAACGCACCTGCCGCtgccacgacacacacacactcagCTGTCACCCACTGAAAGGCGAGTGCACGTGCCAGCCAGGCTGGGCGGGGCTTTACTGCAACGAGACCTGCGCCCGTGGTTACTACGGCCATGGTTGCCTGGAGCCCTGCCTGTGTGTCAACGGAGGGGTGTGTGACAGTGTGAGCGGGGGCTGCCACTGTGCCCCTGGGTACACGGGTGCTCACTGTGAGAGTCCCTGTAAGAGTGGTACCTATGGGAAGGACTGTTCTCTGGAGTGCTCCTGCTCCAACTCAGTGTACTGCTCTCCCATTGATGGGACCTGCTTCTGCAAAGAGGgctgGCGAGGGCGGTACTGCTCCATGCCCTGTTCTAAGGGCACCTGGGGCCCAGGTTGCAACGCCACGTGCCAGTGCGCCAATGGGGCATTGTGTAACCCAGCAGACGGATCCTGCACTTGCTCTCCAGGCTGGCAGGGGCCCCTGTGCGACCAACCATGTCCCATGGGCACGTTCGGGCCAGGCTGCCTGAAGAGGTGTGACTGCCTAAACGCAGACGGCTGCCAGGGTGCCAGCGGGCAGTGCCAGTGTCTGCCAGGGTGGACTGGTGCTCGCTGTGCCCAGACATGCCCAGAGGATACATGGGGACGTCACTGTAACCAGAGCTGCTTCTGTCAGAACAGCGCCACCTGTCTGCCACACAGCGGTGCCTGCGTTTGTCTCCCTGGTTACTGGGGACCCACCTGTCAACAAAtgtgCAGTGCAGGTGTGTATGGTGACCAGTGCAGTATAACATGCCCTTCCTGTgcccactcctcctcctgccaCCATGTCacaggccagtgtgtgtgtaccctcGGGTACACTGGAGCCCTTTGTGAACAAGCCTGTCCAGTGGGTCTCTATGGTAAGCAATGTACTGGAGTGTGTAGATGTGCCCACAACTCATCGTGCCACCATCAGGATGGGTCCTGCCTCTGCCCCCCAGGATGGACAGGCCCTGACTGTACTCTACAATGCCACCATGGGATGTTTGGCCTTAACTGTGCCCAAGTCTGCTCCTGCCCACCCAACTTCTACTGCGACCCACAgacaggggagtgtgtgtgtgaatcaggACCAGGGATCGACTGCAAAAAAGAACGCTTTGTGAGTATGATGGTGCCCGTGTCCCCGGGGGAGAGGGACTCGTGGGGGGCCATCGCAGGCATCGTGGTGCTGGTCATGCTGGTGGTGCTGCTGATGGCCCTGCTCCTGCTCTACCGCCGCCGGCAGAAAGACAAGCAAGCCAACACACCGAcagtctccttctccacctcacGCACCGTCAACTCCGAATACGCAATACCAGATGTTCCTCAcagctaccaccactactacaaccccAGCTATCACACATTGACTTGGAGCAGACCCCCTCTACCACACGTCCCCAACAACCAGGACCGCGCCATCAAGAACACCAATAACCAGCTCTTCTGTGATGTGAAgaacatggagagggagagaggcctgTTCGGGGTGGAGAGCAATGCCACTTTGCCTGCAGACTGGAAACACCACGAGGCTCGCAAAGAACCAGGAGCTTTCAGCATTGACCGCAGTTATAGCTACAGTGCCAGCCTTGGGAAATATTACAACAAAGTGACAGAACTAAAGGACACTGGGGTTGCAGCTAGCAGCAGTTCTCTGAACAGTGAGAACCCCTACGCCACCATTAAAGACCTGCCCGGCCTGCCCTTCAGCCCTCCTGAGAGCAGCTACATGGAGATGAGGACGACCGTGCCCGATGAGAGGTCCTACACGGAGATCAGCCCTCCACCATTCAGCACAGCAACATTACCCAGAGAGCGCAGTTCCCTTGGGCAGGTCCCAGAGCAGGAGCCCCAGAATCACTATGACCTACCTGTGAACAGCCACATCCCAGGACACTATGACCTGCCACCTGTCCGACGCCCACCCTCTCCCGTACGCAGGAGACTGCCCCAATGACACCAGCCCTACTCTGAACATCACAACTCAGAAGAACTACTTTTAAACGTTACTGCCATTCAAAAAATATTGGTAGGAAGTTGTCTTGGGGTTATTCAAGGCTGCAAAACAGTCAGTTGCAGCAGTGACAGTCAGTGCAACCTGACAAAGACAGCAGATTATGCCGATGCTTCTGTCAGTAGGTTTACATCGTAACACTGCCCCCTGGTGGATTAAGGTGGCATTGTATCCACCGTTACACTCTTGTGATCCAGACTCAAGGGCCAAGGCATGTGGGGATAGGCTTTGAGAATGCCAGTATCGCAGTTTGAGGACATACATGCATGCATTCGAGTTTGACCAAACTTGGGATTCCTTCAAATGTTATTTTCACACTGCAgatgaagggacttggcttggagCACATGATTTGGCATACAAGCCTTTTAACCAGAATGACATAAACCGGGACGGCAATTGAAAGACATTTTTATATCCATGATGTCAGTAGTTTAGTATGATGTCTTCTCAAGCCCCTTTTCCCCTCCCCTATAGACAATAGAATGTCAGCTTCCAATTCGGGGAAATCCAGAGCACATTTGTACAGCTAGCGCCTCAGAATGTTGTTCAATGTAATCATGCAATATGTTGTATATAATGTACATTAAATGGCTTAACATTGTATGCACTTGTTCAGAAGCATTTTGTGCTCAGGTAGGTACTCTAATATCACACATCAAACCACAGATGACATTTTATTAAGAAGTCAACCACAAGACGGCATTTGTTGGGAAAATAGTTTTCATTGTGTCGTCTTGAACAGAAAAGGCTGGTACATCATCACTAATTCATTCTACCTGGATTGCATGGTTTTCCCATATTAGGTATAATCATTTCTTACAAATTCAATTGAGCATTATGTACAAGGGCAATTTCCGTACAAATATGCAACTATAGCCAACATACTCTGTAAATCTATAAATTCCATGGTCTTTAAAGACAAAATATCACATATCTTTGGAATTGACCCCTCATAATGCAAAAAGAATACATCATTTCCAATGATCACTAGCAGGTATCAATAAGGCACTTGAGACATGACGAGAAAAGAAATGCTGAAAAGTGACAAAAGtaattatatatatgtataagtTAAAAAATTATTGAGCTTCTCTAAGGTATGTCTGGGGCAGTGAGAATAATCACATTTTCTCCAAATTGGTAGTGATAGAAATGTGTATGaagtacaaaaaaaaaactttcatgTTTCATAAAGTATCAAGTATTCTCAGAAACTCTTCACTGCTTATACATCCTATAAAAAGGCTGCCAGACTACTGTACATGCCTCTAATATATTCAGTGGATAAATATTTGTAGATGATTGTAGCTCATTTGACATAATTGTAAAGAAATAAGACAGAAGAATAAACATGGCCAAAAGAAAAGACACTAAgctcagaaaaacacagccattataaTCCTTTAGTGGGAGAGAGGCCTCTGGA
>XM_036946103.1
TACCCAAAGAGGAAGGGATGCTCCCTCTTCTTCCTTGCCTGCCCCCCGCGTTATTTGCCCAGGACGTCCTTTGTGGTGGCGGTGGTGTGCATCTGGCCCTTGTTTCCAGGTCGCCCCCTGCCTTCCTGTTCTGTCGAGCAGACCTGCAGgACCATGCAGTCACTGCAGACCTGTACCGTCCTGCTGGTTCTGAGCGTTCTGATTGGCCTGTCCTGGTCTCTGAACCCCAGGGACCCCAACGTGTGTAGCCTATGGGAGAGCTTCACAACCTCAGTGAAGGAGTCGTATGCCCACCCTTAtgaccaggtgacagaggaaCCTTGCTCTGAGCCACGCACCTCCTACAGATGCACCCGTCACAGGATCACCTATAAGACAGCATACAGACAGGCGGTGAAGATGGACTACCGCCGGAGGTACCAGTGTTGCCCTGGCTACTACGAGAGCAGAGACAACTGTGTCCCCCGCTGTACTAAGGAGTGTGTCCATGGGAGATGTGTTGCTCCAGACCGCTGCCAGTGTGAGGGAGGCTGGCGTGGCGACGACTGCTCCAGTGCCTGCGATGACCAACACTGGGGTCCAGGTTGTGGTCAGCTGTGTAAGTGTGAGAACGGTGGCCTGTGCAATCCTGTGACCGGTACCTGCCAGTGTCCTCCAGGCTACATTGGGCGCCGCTGCGAGGACCCCTGCCCACCAGGCACCTTTGGCAAGGGCTGTCTTCAGAAGTGCCAGTGTGGAACTGGGGGTTCCTGCAATAAAGTGACCGGAGAGTGCCTGTGTCGAGAAAATTTCACTGGGACATTCTGTGAGAAGGCATGCCCAAGGAGTCGATGCCCGCTGCGATGCCCGTGCCAGAATGGGGGAATCTGCCAGGGGAAGGGGATCTGTGCGTGCCCCCCTGGGTGGACGggTGAGGTGTGTACAGAGCGCTGTGCAGAGGGCAGGTTTGGTCCTAACTGTGCCAACGAGTGTGTGTGTCACAACCGGGGCCACTGCGACCCTGAGACAGGCCATTGCCAGTGTGCTGAAGGCTTCACtggaaacagGTGCAGCGAGGAGTGCCGGGTGGGTAGTTACGGGCGGGACTGTAAGGGTGTGTGCGACTGTGCCAACGGGTCTCGCTGCTATAACATAGACGGAGGCTGTCTGTGTGAGCCTGGCTTCAGTGGACCCCAGTGCAGAGAGAGGATGTGTAGGCACGGCACCTACGGCCTTCAATGTGAACGCACCTGCCGCtgccacgacacacacacactcagCTGTCACCCACTGAAAGGCGAGTGCACGTGCCAGCCAGGCTGGGCGGGGCTTTACTGCAACGAGACCTGCGCCCGTGGTTACTACGGCCATGGTTGCCTGGAGCCCTGCCTGTGTGTCAACGGAGGGGTGTGTGACAGTGTGAGCGGGGGCTGCCACTGTGCCCCTGGGTACACGGGTGCTCACTGTGAGAGTCCCTGTAAGAGTGGTACCTATGGGAAGGACTGTTCTCTGGAGTGCTCCTGCTCCAACTCAGTGTACTGCTCTCCCATTGATGGGACCTGCTTCTGCAAAGAGGgctgGCGAGGGCGGTACTGCTCCATGCCCTGTTCTAAGGGCACCTGGGGCCCAGGTTGCAACGCCACGTGCCAGTGCGCCAATGGGGCATTGTGTAACCCAGCAGACGGATCCTGCACTTGCTCTCCAGGCTGGCAGGGGCCCCTGTGCGACCAACCATGTCCCATGGGCACGTTCGGGCCAGGCTGCCTGAAGAGGTGTGACTGCCTAAACGCAGACGGCTGCCAGGGTGCCAGCGGGCAGTGCCAGTGTCTGCCAGGGTGGACTGGTGCTCGCTGTGCCCAGACATGCCCAGAGGATACATGGGGACGTCACTGTAACCAGAGCTGCTTCTGTCAGAACAGCGCCACCTGTCTGCCACACAGCGGTGCCTGCGTTTGTCTCCCTGGTTACTGGGGACCCACCTGTCAACAAAtgtgCAGTGCAGGTGTGTATGGTGACCAGTGCAGTATAACATGCCCTTCCTGTgcccactcctcctcctgccaCCATGTCacaggccagtgtgtgtgtaccctcGGGTACACTGGAGCCCTTTGTGAACAAGCCTGTCCAGTGGGTCTCTATGGTAAGCAATGTACTGGAGTGTGTAGATGTGCCCACAACTCATCGTGCCACCATCAGGATGGGTCCTGCCTCTGCCCCCCAGGATGGACAGGCCCTGACTGTACTCTACAATGCCACCATGGGATGTTTGGCCTTAACTGTGCCCAAGTCTGCTCCTGCCCACCCAACTTCTACTGCGACCCACAgacaggggagtgtgtgtgtgaatcaggACCAGGGATCGACTGCAAAAAAGAACGCTTTGTGAGTATGATGGTGCCCGTGTCCCCGGGGGAGAGGGACTCGTGGGGGGCCATCGCAGGCATCGTGGTGCTGGTCATGCTGGTGGTGCTGCTGATGGCCCTGCTCCTGCTCTACCGCCGCCGGCAGAAAGACAAGCAAGCCAACACACCGAcagtctccttctccacctcacGCACCGTCAACTCCGAATACGCAATACCAGATGTTCCTCAcagctaccaccactactacaaccccAGCTATCACACATTGACTTGGAGCAGACCCCCTCTACCACACGTCCCCAACAACCAGGACCGCGCCATCAAGAACACCAATAACCAGCTCTTCTGTGATGTGAAgaacatggagagggagagaggcctgTTCGGGGTGGAGAGCAATGCCACTTTGCCTGCAGACTGGAAACACCACGAGGCTCGCAAAGAACCAGGAGCTTTCAGCATTGACCGCAGTTATAGCTACAGTGCCAGCCTTGGGAAATATTACAACAAAGTGACAGAACTAAAGGACACTGGGGTTGCAGCTAGCAGCAGTTCTCTGAACAGTGAGAACCCCTACGCCACCATTAAAGACCTGCCCGGCCTGCCCTTCAGCCCTCCTGAGAGCAGCTACATGGAGATGAGGACGACCGTGCCCGATGAGAGGTCCTACACGGAGATCAGCCCTCCACCATTCAGCACAGCAACATTACCCAGAGAGCGCAGTTCCCTTGGGCAGGTCCCAGAGCAGGAGCCCCAGAATCACTATGACCTACCTGTGAACAGCCACATCCCAGGACACTATGACCTGCCACCTGTCCGACGCCCACCCTCTCCCGTACGCAGGAGACTGCCCCAATGACACCAGCCCTACTCTGAACATCACAACTCAGAAGAACTACTTTTAAACGTTACTGCCATTCAAAAAATATTGGTAGGAAGTTGTCTTGGGGTTATTCAAGGCTGCAAAACAGTCAGTTGCAGCAGTGACAGTCAGTGCAACCTGACAAAGACAGCAGATTATGCCGATGCTTCTGTCAGTAGGTTTACATCGTAACACTGCCCCCTGGTGGATTAAGGTGGCATTGTATCCACCGTTACACTCTTGTGATCCAGACTCAAGGGCCAAGGCATGTGGGGATAGGCTTTGAGAATGCCAGTATCGCAGTTTGAGGACATACATGCATGCATTCGAGTTTGACCAAACTTGGGATTCCTTCAAATGTTATTTTCACACTGCAgatgaagggacttggcttggagCACATGATTTGGCATACAAGCCTTTTAACCAGAATGACATAAACCGGGACGGCAATTGAAAGACATTTTTATATCCATGATGTCAGTAGTTTAGTATGATGTCTTCTCAAGCCCCTTTTCCCCTCCCCTATAGACAATAGAATGTCAGCTTCCAATTCGGGGAAATCCAGAGCACATTTGTACAGCTAGCGCCTCAGAATGTTGTTCAATGTAATCATGCAATATGTTGTATATAATGTACATTAAATGGCTTAACATTGTATGCACTTGTTCAGAAGCATTTTGTGCTCAGGTAGGTACTCTAATATCACACATCAAACCACAGATGACATTTTATTAAGAAGTCAACCACAAGACGGCATTTGTTGGGAAAATAGTTTTCATTGTGTCGTCTTGAACAGAAAAGGCTGGTACATCATCACTAATTCATTCTACCTGGATTGCATGGTTTTCCCATATTAGGTATAATCATTTCTTACAAATTCAATTGAGCATTATGTACAAGGGCAATTTCCGTACAAATATGCAACTATAGCCAACATACTCTGTAAATCTATAAATTCCATGGTCTTTAAAGACAAAATATCACATATCTTTGGAATTGACCCCTCATAATGCAAAAAGAATACATCATTTCCAATGATCACTAGCAGGTATCAATAAGGCACTTGAGACATGACGAGAAAAGAAATGCTGAAAAGTGACAAAAGtaattatatatatgtataagtTAAAAAATTATTGAGCTTCTCTAAGGTATGTCTGGGGCAGTGAGAATAATCACATTTTCTCCAAATTGGTAGTGATAGAAATGTGTATGaagtacaaaaaaaaaactttcatgTTTCATAAAGTATCAAGTATTCTCAGAAACTCTTCACTGCTTATACATCCTATAAAAAGGCTGCCAGACTACTGTACATGCCTCTAATATATTCAGTGGATAAATATTTGTAGATGATTGTAGCTCATTTGACATAATTGTAAAGAAATAAGACAGAAGAATAAACATGGCCAAAAGAAAAGACACTAAgctcagaaaaacacagccattataaTCCTTTAGTGGGAGAGAGGCCTCTGGA

Function

NR:

description
platelet endothelial aggregation receptor 1-like isoform X1

GO: NA

KEGG:

id description
K24331 PEAR1, MEGF12; platelet endothelial aggregation receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021559388.2 False 4762 mRNA 0.51 23 32896415 32939810
XM_036946103.1 True 4693 mRNA 0.52 23 32902516 32939810

Neighbor

gene id symbol gene type direction distance location
LOC110487411 LOC106605313 coding upstream 14357 32877901 ~ 32882058 (+)
LOC110487428 NA coding upstream 20565 32873188 ~ 32875850 (+)
LOC110487398 LOC106605316 coding upstream 44272 32775600 ~ 32852143 (+)
rhbg2a rhbg2a coding upstream 211691 32673648 ~ 32684724 (+)
LOC110534753 LOC106605320 coding upstream 263560 32608262 ~ 32632855 (+)
LOC110487479 LOC106605309 coding downstream 49024 32988834 ~ 33002008 (+)
LOC110487536 NA coding downstream 89063 33028873 ~ 33045721 (+)
LOC110487571 m4a8a coding downstream 90500 33030310 ~ 33033853 (+)
tmem176l.1 m4a8a coding downstream 106022 33045832 ~ 33049288 (+)
LOC110487588 NA coding downstream 190507 33130317 ~ 33160062 (+)
G133324 NA non-coding upstream 51881 32844251 ~ 32844534 (+)
isg20l2 isg20l2 non-coding upstream 290816 32597101 ~ 32605620 (+)
G133185 NA non-coding upstream 350424 32545778 ~ 32545991 (+)
G133163 NA non-coding upstream 375320 32520810 ~ 32521095 (+)
G133157 NA non-coding upstream 381208 32515008 ~ 32515207 (+)
G133374 NA non-coding downstream 41372 32981182 ~ 32982028 (+)
G133272 NA non-coding downstream 71252 33011062 ~ 33012909 (+)
G133415 NA non-coding downstream 141877 33081687 ~ 33081982 (+)
G133417 NA non-coding downstream 143538 33083348 ~ 33083575 (+)
G132342 LOC100136303 other upstream 1008843 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 1530093 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 1603381 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 2146461 30748055 ~ 30749954 (+)
G131491 NA other upstream 2195792 30700182 ~ 30700623 (+)
G133473 LOC106605294 other downstream 227628 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 556644 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 874223 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 1022607 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 1748145 34687955 ~ 34692286 (+)

Expression


Co-expression Network