Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110487587 |
| gene name | LOC106605297 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 33144374 ~ 33173493 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021559504.2 | False | 3323 | mRNA | 0.43 | 3 | 33144374 | 33155609 |
| TU154639 | True | 1690 | lncRNA | 0.37 | 2 | 33144403 | 33173493 |
33,132,000
33,136,000
33,140,000
33,144,000
33,148,000
33,152,000
33,156,000
33,160,000
33,164,000
33,168,000
33,172,000
33,176,000
33,180,000
33,184,000
33,188,000
33,192,000
NC_048566.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487585 | LOC106605295 | coding | downstream | 6396 | 33134138 ~ 33137978 (-) |
| LOC118936288 | LOC106605301 | coding | downstream | 64346 | 33075283 ~ 33080028 (-) |
| LOC110487583 | LOC106605302 | coding | downstream | 69494 | 33057005 ~ 33074880 (-) |
| LOC110487525 | LOC106605242 | coding | downstream | 117237 | 33020821 ~ 33027137 (-) |
| LOC110487507 | LOC106580651 | coding | downstream | 124077 | 33017135 ~ 33020297 (-) |
| LOC110487594 | LOC106605294 | coding | upstream | 9369 | 33164978 ~ 33172969 (-) |
| LOC110487618 | LOC100380645 | coding | upstream | 52891 | 33208500 ~ 33225125 (-) |
| bola1 | bola1 | coding | upstream | 98947 | 33254556 ~ 33256182 (-) |
| sv2a | LOC106605292 | coding | upstream | 100865 | 33256474 ~ 33313903 (-) |
| LOC110534759 | LOC106605290 | coding | upstream | 171403 | 33327012 ~ 33357457 (-) |
| G134231 | NA | non-coding | downstream | 37869 | 33084935 ~ 33106505 (-) |
| G134227 | m4a8a | non-coding | downstream | 94781 | 33031249 ~ 33049593 (-) |
| G134229 | NA | non-coding | downstream | 142457 | 32994377 ~ 33001917 (-) |
| G134253 | NA | non-coding | downstream | 162095 | 32981056 ~ 32982279 (-) |
| G134361 | NA | non-coding | upstream | 75387 | 33230996 ~ 33231201 (-) |
| G134364 | NA | non-coding | upstream | 80356 | 33235965 ~ 33236189 (-) |
| G134367 | NA | non-coding | upstream | 94311 | 33249920 ~ 33250188 (-) |
| G134369 | NA | non-coding | upstream | 97604 | 33253213 ~ 33253422 (-) |
| G134379 | NA | non-coding | upstream | 131130 | 33286739 ~ 33287261 (-) |
| G134102 | NA | other | downstream | 356253 | 32748208 ~ 32788121 (-) |
| LOC110514821 | NA | other | downstream | 392796 | 32738829 ~ 32756992 (-) |
| LOC110486999 | prdm1 | other | downstream | 1495579 | 31631886 ~ 31648795 (-) |
| G132197 | NA | other | downstream | 1601365 | 31536047 ~ 31543009 (-) |
| LOC110486868 | LOC106605361 | other | downstream | 1945562 | 31196917 ~ 31199241 (-) |
| G134668 | NA | other | upstream | 709879 | 33865488 ~ 33865937 (-) |
| G135575 | NA | other | upstream | 1448606 | 34604215 ~ 34604478 (-) |
| G136399 | psmc4 | other | upstream | 2150758 | 35306367 ~ 35307729 (-) |
| drd2l | LOC106582624 | other | upstream | 2518689 | 35674291 ~ 35700846 (-) |
| LOC110487659 | LOC106605289 | coding | upstream | 185666 | 33359159 ~ 33391810 (-) |
| G134254 | NA | non-coding | downstream | 162515 | 32981436 ~ 32981888 (-) |
