bola1 (bola1)


Basic Information

Item Value
gene id bola1
gene name bola1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 33254556 ~ 33256182 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021559550.2
TACAAGTCCCAGGCAGTCCAAAGCAGGCAGCACTTCCTGTGTACGTTGGAAAACTGAGGACACTGTGAAAAGGCTTTCTACAGTCGTCGACTTCCCCAAAATCCTCTGAATGCTGCCCAGTGTTCTCCGCTGTGCCAGTCCAATCTCCACCACCCTCGCCTTCACCAGGCCCTTAGCCCACTTCAGACCCCACATGGCTCCTGATCCCAACCGGCCCGTGGAGGGGGCCATACGGACCAAGCTCACCCAGCAGTTGGAGCCAGAACACCTGGAAGTCCACAATGAGAGCCACATGCACGCCGTGCCCCCTGGATCCGAGTCCCACTTCAGAGTCCTGGTGGTCAGCCCACGCTTCGACGGCCTCTCCCTGCTACAGCGCCACCGCCTTGTCAACGAGACCCTAGCCGAGGAGCTGAAGAGCTGTGTCCACGCGCTGGCCATCCAGGCCAAGACACCCCTGCAGTGGGGCAGCAACCCCAGCATAGCCAAGAGCCCACCCTGCATGGGAGGATCCAAGGGGGACCACACGGTGGAGGAGAAACTCAAGGCTGGACGGGACTGACCAGCAAAACTCAGCAGTCATCAACCCTGGTTCTAGAGAGTAACAGCCTGTGCGGGCTTTGGTTCCAGCACTAACTCATCTATTaaaatgtgttgtctgttcaaTACCTTGATAAGTTTAATCAggtctggaacaaaagcctgaacGCCCCATATGCCTGCAGTTGAAGAGGGTGTCAATTAACATTGTTGTAAACTAGTGTGATATCATTTCAATACTGCTTGAGAGATTGTTTCTAAATGAGCAACATCGCTTCGGTCTCTTGGCAGTTTAATTCAAGAAGAGTTTGGTTTTAGATTAGACTCCTGCATTTTAGTGGCCATCACTAAAATGAAGTGCACGAAGAAGTGAAGTGCACGAAGTCGAGACAGAATAAAGAATATGTTTTCTCAAGGTGCATTGGGGCAGTTTTGTGGTTAGcattatttcccccccccccccccaaagggctTGGGTGTCTGCtaataaaaatacatatttgatGACA

Function

symbol description
bola1 Predicted to be active in mitochondrion. Orthologous to human BOLA1 (bolA family member 1).

NR:

description
bolA-like protein 1

GO: NA

KEGG:

id description
K22066 BOLA1; BolA-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021559550.2 True 1049 mRNA 0.52 2 33254556 33256182

Neighbor

gene id symbol gene type direction distance location
LOC110487618 LOC100380645 coding downstream 29431 33208500 ~ 33225125 (-)
LOC110487594 LOC106605294 coding downstream 81587 33164978 ~ 33172969 (-)
LOC110487587 LOC106605297 coding downstream 98947 33144374 ~ 33173493 (-)
LOC110487585 LOC106605295 coding downstream 116578 33134138 ~ 33137978 (-)
LOC118936288 LOC106605301 coding downstream 174528 33075283 ~ 33080028 (-)
sv2a LOC106605292 coding upstream 292 33256474 ~ 33313903 (-)
LOC110534759 LOC106605290 coding upstream 70830 33327012 ~ 33357457 (-)
LOC110487659 LOC106605289 coding upstream 102977 33359159 ~ 33391810 (-)
rbm8a rbm8a coding upstream 144593 33400775 ~ 33404514 (-)
LOC110487699 NA coding upstream 152734 33408916 ~ 33413968 (-)
G134369 NA non-coding downstream 1134 33253213 ~ 33253422 (-)
G134367 NA non-coding downstream 4368 33249920 ~ 33250188 (-)
G134364 NA non-coding downstream 18367 33235965 ~ 33236189 (-)
G134361 NA non-coding downstream 23355 33230996 ~ 33231201 (-)
G134379 NA non-coding upstream 30557 33286739 ~ 33287261 (-)
G134385 NA non-coding upstream 36662 33292844 ~ 33293687 (-)
G134456 NA non-coding upstream 177522 33433704 ~ 33434590 (-)
G134102 NA other downstream 466435 32748208 ~ 32788121 (-)
LOC110514821 NA other downstream 502978 32738829 ~ 32756992 (-)
LOC110486999 prdm1 other downstream 1605761 31631886 ~ 31648795 (-)
G132197 NA other downstream 1711547 31536047 ~ 31543009 (-)
G134668 NA other upstream 609306 33865488 ~ 33865937 (-)
G135575 NA other upstream 1348033 34604215 ~ 34604478 (-)
G136399 psmc4 other upstream 2050185 35306367 ~ 35307729 (-)
drd2l LOC106582624 other upstream 2418116 35674291 ~ 35700846 (-)
G137479 NA other upstream 3113822 36370004 ~ 36370328 (-)

Expression


Co-expression Network