Item | Value |
---|---|
gene id | LOC118939517 |
gene name | NA |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 33531590 ~ 33540695 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005036461.1 | True | 898 | mRNA | 0.39 | 3 | 33531590 | 33540695 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
ntrk1 | LOC106605284 | coding | upstream | 70593 | 33434698 ~ 33460997 (+) |
LOC110487688 | LOC106605287 | coding | upstream | 123071 | 33406809 ~ 33408519 (+) |
LOC110487649 | LOC106581815 | coding | upstream | 209756 | 33316290 ~ 33321834 (+) |
LOC110487588 | NA | coding | upstream | 371528 | 33130317 ~ 33160062 (+) |
tmem176l.1 | m4a8a | coding | upstream | 482302 | 33045832 ~ 33049288 (+) |
LOC110487797 | LOC106605278 | coding | downstream | 127448 | 33668143 ~ 33694941 (+) |
LOC110487856 | LOC106581981 | coding | downstream | 179138 | 33719833 ~ 33726238 (+) |
tap1 | tap1 | coding | downstream | 192749 | 33733444 ~ 33746441 (+) |
LOC110487876 | NA | coding | downstream | 208952 | 33749647 ~ 33758792 (+) |
LOC110487915 | LOC106582023 | coding | downstream | 333210 | 33873905 ~ 33880108 (+) |
G133678 | NA | non-coding | upstream | 17728 | 33513333 ~ 33513862 (+) |
G133677 | NA | non-coding | upstream | 18797 | 33512312 ~ 33512793 (+) |
G133676 | NA | non-coding | upstream | 21783 | 33509545 ~ 33509807 (+) |
G133670 | NA | non-coding | upstream | 27124 | 33504144 ~ 33504466 (+) |
G133655 | NA | non-coding | upstream | 49038 | 33482283 ~ 33482552 (+) |
G133699 | NA | non-coding | downstream | 19236 | 33559931 ~ 33560301 (+) |
G133725 | NA | non-coding | downstream | 52928 | 33593623 ~ 33593990 (+) |
G133761 | LOC106605277 | non-coding | downstream | 93464 | 33634159 ~ 33715078 (+) |
G133781 | NA | non-coding | downstream | 136689 | 33677384 ~ 33680485 (+) |
G133785 | NA | non-coding | downstream | 199899 | 33740594 ~ 33742572 (+) |
G133663 | LOC106605282 | other | upstream | 34305 | 33496454 ~ 33497285 (+) |
G133473 | LOC106605294 | other | upstream | 362212 | 33167438 ~ 33169378 (+) |
G132342 | LOC100136303 | other | upstream | 1644018 | 31834170 ~ 31887572 (+) |
eaf1 | LOC106581241 | other | upstream | 2165268 | 31360408 ~ 31366322 (+) |
LOC110534710 | LOC106605356 | other | upstream | 2238556 | 31262054 ~ 31294577 (+) |
G133760 | LOC106605274 | other | downstream | 273338 | 33814033 ~ 33814483 (+) |
G134735 | LOC100136012 | other | downstream | 421722 | 33962417 ~ 33962658 (+) |
si:dkey-30e9.6 | LOC106605205 | other | downstream | 1147260 | 34687955 ~ 34692286 (+) |
G135916 | NA | other | downstream | 1430945 | 34971640 ~ 34971931 (+) |
G135920 | LOC106605214 | other | downstream | 1431754 | 34972449 ~ 34972801 (+) |