LOC110488219 (agmo)


Basic Information

Item Value
gene id LOC110488219
gene name agmo
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 34824933 ~ 34849214 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036946769.1
TTCTATCTCCCCATGGCGTTGGCAGTACCACCCTCTGTGTTTGCTGTTCACATCCAATTCAACCTGGTCTACCAGTTCTGGATCCACACTGAGGTGATCAGAGATATGGGACCTCTGGAGTGGGTCCTAAACACCCCCAGTCACCACAGAGTTCACCACAGTACCTTTGCTCCAGATGGCGATAAAGTTGTCTACGGTCTCGTAcacaaaataaacacatttgaaGTCCTCCATATTCAGATGCTATCCCAGCTGACTGTTCTGATGATGACTGGCTACATTCTACTCAGTCTGACCTCCATTGGCTTCATCATTGACCAAAACTGCAGGTCAACGGCATCCATGTTGGAGTTGCTGCGCTGTGTTCTGACGGTGATGCTGCTGCGATACGGCTACATGACGGCACCAGCACCACTGGTTGTGCCCATTGAGgCCTTTGTCTCCATCTCCCTGCTGTACTGGGGCCTGCAGACATTCAGCCAATTGATTGCAGTCAAGCAGAAGACAACATGAGATTGTCAGGTCCCATTGGCTTACTGTACCTGGCTTCACCAAATGTTCGAAGGACTTTAGCCATGACTTTAGGTAGCCACACTTTACCATGTATTAACCAACTTACAAGCTTCTATGAATCAAAGAGGATTTATAATGAGCATATCTTGCCTCATAACAATATTTGTTAGTGTTTTTAATCGGACAAGCATATTATGTATGAACGGCCATAGGCCACTATACCTACGGCCATTCATAGTGTTTCTATGCTTTATCTTATGGGAAGGCAGCTTTTCTGATTTTGTTCAAATTATACTGTTATATGCTGctattgattgactgattgattacaatacaatacaatacattccAGTTTAGTGAGCCATTGAGAATATTATGAATGACTTTTAAAACTTTACCTACACCTTTACCTGTACAACAAATACCTCCTAAAACTGCAGGATAACTTTTCCTAGGATCTCTTTTTTCATGAAATATAATACTTCTTAACTCTATATTTTTCAGTTCCATTTTTGACTAAACAGTTTTCTG

Function

symbol description
agmo Predicted to enable glyceryl-ether monooxygenase activity and iron ion binding activity. Predicted to be involved in ether lipid metabolic process and membrane lipid metabolic process. Predicted to act upstream of or within lipid biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human AGMO (alkylglycerol monooxygenase).

NR:

description
PREDICTED: alkylglycerol monooxygenase isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036946769.1 True 1044 mRNA 0.42 6 34824933 34849214

Neighbor

gene id symbol gene type direction distance location
dgkb dgkb coding downstream 9759 34762165 ~ 34815174 (-)
etv1 etv1 coding downstream 65788 34740495 ~ 34759145 (-)
LOC110534811 LOC106582196 coding downstream 147278 34646955 ~ 34677655 (-)
LOC110534798 LOC106582184 coding downstream 224542 34493522 ~ 34600391 (-)
LOC110488138 LOC106605258 coding downstream 331648 34484065 ~ 34493285 (-)
meox2a meox2 coding upstream 32519 34881733 ~ 34895112 (-)
crppa ispd coding upstream 64482 34913696 ~ 34946214 (-)
LOC110488240 LOC106582291 coding upstream 97685 34946899 ~ 34949511 (-)
ankmy2a ankmy2 coding upstream 103847 34953061 ~ 34960249 (-)
LOC110488264 LOC106605214 coding upstream 117693 34966907 ~ 34982793 (-)
G135668 NA non-coding downstream 88899 34735621 ~ 34736034 (-)
G135522 NA non-coding downstream 223482 34600883 ~ 34601451 (-)
G135438 NA non-coding downstream 351456 34443079 ~ 34473477 (-)
G135850 NA non-coding upstream 28524 34877738 ~ 34878215 (-)
G135950 NA non-coding upstream 55630 34904844 ~ 34905084 (-)
G135980 NA non-coding upstream 102632 34951846 ~ 34952080 (-)
G135982 NA non-coding upstream 125151 34974365 ~ 34974590 (-)
G135575 NA other downstream 220455 34604215 ~ 34604478 (-)
G134668 NA other downstream 958996 33865488 ~ 33865937 (-)
LOC110487618 LOC100380645 other downstream 1599831 33208500 ~ 33225125 (-)
G134102 NA other downstream 2036812 32748208 ~ 32788121 (-)
LOC110514821 NA other downstream 2073355 32738829 ~ 32756992 (-)
G136399 psmc4 other upstream 457153 35306367 ~ 35307729 (-)
drd2l LOC106582624 other upstream 825084 35674291 ~ 35700846 (-)
G137479 NA other upstream 1520790 36370004 ~ 36370328 (-)
G137839 LOC106605146 other upstream 1784979 36634193 ~ 36639005 (-)
G138080 NA other upstream 1976652 36825792 ~ 36828397 (-)

Expression


Co-expression Network