Item | Value |
---|---|
gene id | LOC110488375 |
gene name | LOC106605227 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 35172574 ~ 35180466 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
protein C-ets-2-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021560615.2 | False | 2097 | mRNA | 0.47 | 9 | 35172574 | 35180466 |
XM_021560610.2 | True | 2129 | mRNA | 0.47 | 9 | 35172575 | 35180466 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
lypc | LOC106584559 | coding | upstream | 18939 | 35151760 ~ 35153650 (+) |
LOC110488356 | ccdc105 | coding | upstream | 20867 | 35150511 ~ 35151707 (+) |
LOC110488331 | LOC106582353 | coding | upstream | 31098 | 35127970 ~ 35141476 (+) |
LOC110533739 | ppt2a | coding | upstream | 45060 | 35122803 ~ 35127514 (+) |
tnf-alpha | tnf-alpha | coding | upstream | 147566 | 35023007 ~ 35025008 (+) |
LOC110488391 | LOC106582385 | coding | downstream | 184 | 35180650 ~ 35184002 (+) |
dnajc28 | dnajc28 | coding | downstream | 7359 | 35187825 ~ 35195853 (+) |
LOC110534843 | LOC106605230 | coding | downstream | 24715 | 35205181 ~ 35239245 (+) |
LOC110488465 | psmc4 | coding | downstream | 113633 | 35294099 ~ 35307452 (+) |
LOC110488474 | LOC106605235 | coding | downstream | 144810 | 35325276 ~ 35334443 (+) |
G136086 | NA | non-coding | upstream | 14537 | 35157832 ~ 35158037 (+) |
G136079 | NA | non-coding | upstream | 27128 | 35143735 ~ 35145446 (+) |
G136055 | NA | non-coding | upstream | 70499 | 35101843 ~ 35102075 (+) |
G136044 | LOC106605219 | non-coding | upstream | 83242 | 35087279 ~ 35089332 (+) |
G136097 | NA | non-coding | downstream | 18876 | 35199342 ~ 35200486 (+) |
G136144 | NA | non-coding | downstream | 108911 | 35289377 ~ 35289644 (+) |
G136199 | NA | non-coding | downstream | 210602 | 35391068 ~ 35391284 (+) |
G136201 | LOC106584099 | non-coding | downstream | 212842 | 35393308 ~ 35393788 (+) |
LOC110488281 | apom | other | upstream | 172019 | 34984948 ~ 35000555 (+) |
G135920 | LOC106605214 | other | upstream | 199773 | 34972449 ~ 34972801 (+) |
G135916 | NA | other | upstream | 200643 | 34971640 ~ 34971931 (+) |
si:dkey-30e9.6 | LOC106605205 | other | upstream | 481628 | 34687955 ~ 34692286 (+) |
LOC110488639 | LOC106605005 | other | downstream | 605225 | 35785691 ~ 35788114 (+) |
LOC100653444 | LOC106584591 | other | downstream | 674683 | 35855149 ~ 35865269 (+) |
G136994 | NA | other | downstream | 802366 | 35982832 ~ 36037741 (+) |
G137058 | LOC106605156 | other | downstream | 919145 | 36099611 ~ 36100277 (+) |