LOC110488492 (LOC106605237)


Basic Information

Item Value
gene id LOC110488492
gene name LOC106605237
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35366832 ~ 35380061 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021560726.2
AAAAAAACACAGACAACTGTGTTGTCTCATGTTTAGACCTGACACAGCAAGACAGCAGCCATTCCTGAGCTAAACAGACTGCGTTATAGATGGCGTACTCCACCAAAACTCTTGCTGCTGGCTCGTTTGGGAAGGTATACAAGGAGAAGTACAATGACACCTGGGCTGCAATCAAGAAGGTGCCACAACACTTAATCAATAGGAGAGACCTGGAGAGAGAGTGTCAAGTATACAATAAAGCGATTCATCCTAACATAGTGAAGCTTCTGGGTAATCCAACACTCAAGGACTCTAAGTGGATCATCCCCATGGAGTTCATCTTTGGAGAGGAACTGGAGACAACCATCTTCAAATCACAAAAATCTAAAATACAGTTGACTCCATCTATAAAGGCCACCATCATCACAGGCATGTGTGAAGGACTGCTTCACCTACACAGCAAAGATATCGTCCATCAAGACCTCAAGCCTGAGAACATCATGGTAGAGCATGACACTCACAGAGCTGTGATCATTGATATGGGACTGGCCAAATTCTTCCGCAATGGCCTAAATTCTGCCGTGGATATGGGCAACGAGGCCTACTCTCCACCTGAGGTCCTGCAGAGGCGGGGCCACCGAGACCAGCGTTCGGACGTGTGGGCTATGGGTAAAATCATTGCTGAACTCTGTGCCAGAGTCAGGCTGCACACCCCCAGTGTCTGTCCGGCTAAGATCCATGAGATCCTCAGTCTCCAAGGACAGCAGTACTGTAACGCTGTCTGTAGGATGGTGCAGAGTGACCCCACAGTGCGAGCCACCATGGCCGGGATCATGCCAGAGATACGAAAGGCAGTGGGAGGTGGCAACACCGAGGAACAACAAAGAGGACATCTTCCGACACCCTTTCCTCACACTGAGATAAAAGTCACATCGCCACGTCCTCAAGCTCCTGTACAGCAATCACTCCCTCTATCAAGAGCTGAGTGCGCAGCCTCACCAAGGCCTGAGGTCAAGACGCTAGTGCGAGCTCCTGTGCGAGCACCTTCTCCATCAATATGGGAGCGTGCAGCCTTGCCAAAGACTGAGGTCAAGACTGAGGTCAAGACAACACTGCAACCACAACCCGTACAGCGTTCACCTTCCCCGTCAAGGTGGGAGCGTGCAGCCTTGCCAAAGACTGAGGTCAAGACTGAGGTCAAGACAACACTGCAACCACAACCCGTACAGCGTTCACCTTCCCCGTCAAGGTGGGAGCGTGCAGCCTTGCCAAAGACTGAGGTCAAGACTGAGGTCAAGACAACACTGCAACCACAACCCGTACAGCGTTCACCTTCCCCGTCAAGGTGGGAGCGCGCAGCCTTGCCAAAGATTGAGGTTAAGGCGACACTGCAACCACAACCTGTACAGCGTTCATCTTCCCCGTCAAGATGGGAGCGTGCAGCCTCTCCAAATCCTGAAGTCAAGAACTCATCATCTCCCCTTCCaaaggtagaccagggtaatgcACTGGTTCCATTAGGCATGGTTCAACCCAGTCAAGATGTCATGAAACAGCTTCTCTACGAAGAGGCCTTGAAGGGTCTCCCATGCCCACTCCCAACAACGGGCAAGGTGCGAATCCGCCGTTATGAGCAAAGGAATGGGGAAGTGGAGACTTGGGAGCAAAAGGAGGTGGAGACTGAAGGAGGGAGGATAGTCAAGTTTGAGGATGTGATGTTTAACAACAAGTCATAAGTAGGTTATTGAGAGGTTGTGAAATAGTTGCGAGTTGATTTGACTCTGCTTCTGAAATAGTTGGGAGTTGATTTGACTCTGGTCACTCCCCTTATATCCTTCATTGTAAAAGACTGACATTTGTATGGAGAAGGGGAAGAGTATATTTGGGAGATTGGATAAACTAATGGAAGAATTCTAACTTCCAGTGAAACTATACCAGATGTACTGTGCCTAAAAACAAAGTGGCACAATATCCCACAAcgtgagacccccccccc

Function

NR:

description
serine/threonine-protein kinase Nek8-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021560726.2 True 1975 mRNA 0.50 5 35366832 35380061

Neighbor

gene id symbol gene type direction distance location
LOC110488508 LOC106605236 coding downstream 8841 35347843 ~ 35357991 (-)
LOC118939540 NA coding downstream 42150 35307742 ~ 35324682 (-)
LOC110488446 LOC106582421 coding downstream 101184 35240548 ~ 35265648 (-)
si:ch211-225p5.8 LOC106605232 coding downstream 161704 35199344 ~ 35205128 (-)
LOC110488360 LOC106605226 coding downstream 192639 35158483 ~ 35174193 (-)
LOC118939553 LOC106582593 coding upstream 227480 35607541 ~ 35609429 (-)
LOC110534863 LOC106605168 coding upstream 229568 35609629 ~ 35610797 (-)
LOC110488593 LOC106605167 coding upstream 249488 35629549 ~ 35663662 (-)
LOC110488606 LOC106605166 coding upstream 284187 35664248 ~ 35668411 (-)
drd2l LOC106582624 coding upstream 294230 35674291 ~ 35700846 (-)
G136371 NA non-coding downstream 82058 35245049 ~ 35284774 (-)
G136340 NA non-coding downstream 175161 35191088 ~ 35191671 (-)
G136332 NA non-coding downstream 190643 35175646 ~ 35176189 (-)
G136319 NA non-coding downstream 225103 35141550 ~ 35141729 (-)
G136318 NA non-coding downstream 225394 35140408 ~ 35141438 (-)
G136433 LOC106605238 non-coding upstream 42805 35422866 ~ 35538723 (-)
G136432 LOC106582469 non-coding upstream 46177 35426238 ~ 35426969 (-)
G136435 NA non-coding upstream 48938 35428999 ~ 35477440 (-)
G136437 NA non-coding upstream 113756 35493817 ~ 35498313 (-)
G136539 LOC106605190 non-coding upstream 172987 35553048 ~ 35572904 (-)
G136399 psmc4 other downstream 59103 35306367 ~ 35307729 (-)
G135575 NA other downstream 762354 34604215 ~ 34604478 (-)
G134668 NA other downstream 1500895 33865488 ~ 33865937 (-)
LOC110487618 LOC100380645 other downstream 2141730 33208500 ~ 33225125 (-)
G134102 NA other downstream 2578711 32748208 ~ 32788121 (-)
G137479 NA other upstream 989943 36370004 ~ 36370328 (-)
G137839 LOC106605146 other upstream 1254132 36634193 ~ 36639005 (-)
G138080 NA other upstream 1445805 36825792 ~ 36828397 (-)
pnrc2 LOC106605140 other upstream 1464872 36844929 ~ 36849373 (-)

Expression


Co-expression Network