LOC118936740 (LOC106582469)


Basic Information

Item Value
gene id LOC118936740
gene name LOC106582469
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35445101 ~ 35454058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933794.1
aTGTACGAGGAGGAGAACGAGAATGGTAAGCCAGCAGCAGAGACATATGAGAATACAGAGCTTTACTCCAACGTCAAGGCTATTATGGGTGACGCCCCTGTCCTTCTGGAAGAGTCCAAGTGCACAGTGGTGAGGGAGGGAGTCCAGTGTGTTTGCATGGCTACGGGTAACCCTGAGCCCATCATCGAGTTCTACCTCCCCGACAAGAACATCACCATCAACGACACGGACGGCCGCTACAACTACTACACGCACACGGACGGCCACACGTCCACGGGCATGATAAAACTACGGGAGAAGGGCGAGCGCCTGGGCAACGGTGCTGTCAATGTGCACTGCAGCATCAGCAACATATACGGGTCGGAGAGCTTTCATCTGGAGTTACAGCAGGAGAAGAAGTACATGATGGCAGTGATTGTTGGCACCATCGGTGGAGTGGCTGTCATCGCCTTCATCATCGCAGCAGTGAGATATGTGGGCCATAACAACAAGAAAGAGAATGGCAACCCTGGGCAGGACCTGGTCTCTAAACTGGAGAACCCAGCGTTGTACTACAGCACAGTCAAGAAGGACAAACAATGTCTGAGGAAGAAAGTGCTTAAGACAGAGCTTCTGGGCTCAAAGTTTAACTCCATTCTAGAGGAGAGCACGGGAGAAGACGGGGATTATCAACCTGTGGGCTCTATGGCAGACCTGGAGAGGCAAGAGCTGAATTACGCCGCCCTGCAGTTTCTCGGGGGGCGCTCCAGGGATGGGGGGGCCTCAGGGAGGGGGGATGACGGCAGCGACTACACCGAGATCAAGGCCAAATGAATCGCGATCCTTCCCTGACCCATCGTCACCGCGGGACACAGTGGCAGCCATGTTGTCGCCCCCCTCCTCACGTCATTCGCCCCCTCTTCAAACGTCTTCCCCCCTCCCCCGTAGACTCCACCCCCAACCTTCACCGTCACACCAAGAACTCCCACCGTCTCCGCCCGTCCCTGAATCATCTCAAATGACGTCCCCGTTAGTCGACCCCCAAGCCTCCAAGGGGAACCCCAGTCACATCTCGCCACCCAGGACTGCTGGTAGCTACTTGCAGGGTCAGAACACGGCCCAGTGGACAATGTAAAAAGATCTTTGTATTATCAGCAGCTGTCGGTCTCCAGGCTCTTACTCTATTGTTCATAGTCAAACAATTCCCTCACAACAGGTGCAATGCgttagttactgtactgtatcatctAGATTCAATGTTGCTATTTCCATCTCTACACCATTAATTGTTGGCATTGCTTTTCTGGGGCTCCCCTTCTGTATGTCACCCTATATCATACTCATagctagcctggttaaaccagattGAACGCTGAGCTCACCAGTTTTCCTGTGAAACGCAGCGCAATCAGTTTGGATACCAGGCTAACTGTCTAGATCCATCCGTTATAGTTCTTCTCCACTGTGTCCGCTGCCAGTCGAAGTGTCAGGGAAAGGGGTGTGTTTTGTGCTTTTTCTTttcttatctctatttctgacccTGGATCTGGAGGAAATGAGggatctcttctctcttcctgatCCAGTGGTTGTCAACGCTGACCAGTGTTCAACAAACGTTAGGCCTGAtacacatccaattgaagccTGTCATCTTCATCTCACATATTCTGTTCCAACATATAGTTCAATAGTGATGTGTGCTGTGACTCTGTGGCTTTTGATGATGATGAGAAATGAATATTTCTTTGATTTTATATAAAGAGAGAAAATTGATACTCTTACAGGTTTGTGGAGCCTCGAACACAAGGTTCTGCTCGTGCAAGAAGTGGCCtgaatatttttgtttttatgcATTATAAGCACTGATTGCATTGTGTTTTGCTCTTGTGGAAATATGCCGGGGTAACACAGAATGTTCTATTTATTCCGTTGCCCATGATTTAATTACTAGTATTTTTGGACGATGTTTTGCTAAGGGTAAGTGTTAACTTATCCTTAAATGGGAACCAATGGATTAGAATACATTTTTGGATCAATCTGGCATACATGACTCCACTGTAACACTCGCACAGCAGGACAAAATGTATCTCGTtgagacaatgtgtgtgtgtgtgtatgtaaacagTGCTGAAAGATCAGCGAACACTGATCACTGTGGGTGTTTCAAAAGATCACTTTACCTGAGACCGCTTCTCACAAAATGTCTACGTCAATGGTTGTGAAGTGTGAAATCGATGCCTAATCCTATAGGGTTGTATCAGAGGAGGCATTTGAGTGGCACAACATTGAAGTTGTTATACCAGTTGGTTGTGCTATTCAAACATACTTGATCAACTCATGTAATGTAATCTCCAAGCTCACTAATGGCAACACTAGATAACAATGACTGTTAATACAATATTAATAAGCTGCATATGGATGGGTAAAAGGATACCTGTATACATTATGTAAATAAATACCCTGCATGACTATTATGCTGTCAGCCATATGTGTAGATACACTACGGTATGTACATGCTCACTATTGCAACAATGGTTTACACAGGCAAGTCGGATACAGGTTCGGTAACACTTTAACTGACTTCTCTGTCATAAGGGTGACATAACGctgtcataacataacacatgTCATTTTCGGTCATGTAAACTGATGTCAAAATACTGACAACCCTTTACACTGTCATGACACAAATGGGTATTTATGTAAATTAGTTGGCTAGCGGTATGCTAAGCCAATAACCTGACTGAAGCAAAGATTTGTGCCATGACGGTGTCAAGCTTATGTCAGCTGTCATGACTGTTTAATAACATATTTTATGTCATTGTTCTGACATGGTTAAGTCACTAGACCTAATGGCAGAGCGTTCAAGATGTGTTGCCCAACATTGAGACATGCCAATATGGACATCCGTTTAGTAACACTTACTGTCGTCAGTTCTCTTGAACGCCTCATGGGGGGGTTTATTTCTTTCTAAACCTGGGAACAAAATGGAGAAGCGTTGTTCATGTCTTCTCTAATTTGTTTGTCACATAGTGTGTTGTAAAGCAGATTTGTACTTTCTTTACTTTGTggtattcattattattattgtgatgattttttttttatatctttgACACAATAATTCCGATCAGAATTCTGCAATCCTTCTGCAAATTAGCACTGTTATTACTTAATGACAATAAGAGCTCTATGATGATGTTTGATCATTCTCTTTCTTTTACAAGTCTGTCCCGCCTCAAGCAAAGCCATCTTTCTTTGGGTCCAAACAACAAATAAATCAAGTAAACAA

Function

NR:

description
myelin-associated glycoprotein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933794.1 True 3274 mRNA 0.45 6 35445101 35454058

Neighbor

gene id symbol gene type direction distance location
LOC118936739 LOC106605239 coding upstream 1071 35442141 ~ 35444030 (+)
LOC110488530 LOC106605238 coding upstream 13196 35406919 ~ 35431905 (+)
LOC110488522 lsr coding upstream 39129 35396335 ~ 35405972 (+)
LOC110488474 LOC106605235 coding upstream 110658 35325276 ~ 35334443 (+)
LOC110488465 psmc4 coding upstream 137649 35294099 ~ 35307452 (+)
LOC118939544 LOC106605239 coding downstream 12208 35441730 ~ 35470406 (+)
LOC118939545 LOC106582469 coding downstream 18065 35472123 ~ 35477382 (+)
LOC118939546 LOC106582469 coding downstream 38759 35492817 ~ 35498083 (+)
LOC110488566 LOC106605239 coding downstream 52599 35506657 ~ 35512190 (+)
LOC110534853 NA coding downstream 72028 35526086 ~ 35540448 (+)
G136202 NA non-coding upstream 49918 35394744 ~ 35395183 (+)
G136201 LOC106584099 non-coding upstream 51313 35393308 ~ 35393788 (+)
G136199 NA non-coding upstream 53817 35391068 ~ 35391284 (+)
G136144 NA non-coding upstream 155457 35289377 ~ 35289644 (+)
LOC110488573 LOC106605190 non-coding downstream 94490 35548120 ~ 35554239 (+)
G136554 NA non-coding downstream 120066 35574124 ~ 35574329 (+)
G136561 NA non-coding downstream 123900 35577958 ~ 35578281 (+)
G136573 NA non-coding downstream 131971 35586029 ~ 35586280 (+)
G136583 NA non-coding downstream 140477 35594535 ~ 35594840 (+)
LOC110488391 LOC106582385 other upstream 261105 35180650 ~ 35184002 (+)
lypc LOC106584559 other upstream 291451 35151760 ~ 35153650 (+)
LOC110488281 apom other upstream 444546 34984948 ~ 35000555 (+)
G135920 LOC106605214 other upstream 472300 34972449 ~ 34972801 (+)
G135916 NA other upstream 473170 34971640 ~ 34971931 (+)
LOC110488639 LOC106605005 other downstream 331633 35785691 ~ 35788114 (+)
LOC100653444 LOC106584591 other downstream 401091 35855149 ~ 35865269 (+)
G136994 NA other downstream 528774 35982832 ~ 36037741 (+)
G137058 LOC106605156 other downstream 645553 36099611 ~ 36100277 (+)
LOC110488849 LOC106605147 other downstream 927834 36354883 ~ 36405310 (+)

Expression


Co-expression Network