LOC110534863 (LOC106605168)


Basic Information

Item Value
gene id LOC110534863
gene name LOC106605168
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35609629 ~ 35610797 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021619801.2
CAGATCATTGCCATGAAAAGCTAGACCTAGCCTATCAAGTTGGATACGGCCCACTTCTGGTGTAATTCAAAGTAGTAACTGGGCCACATCTACAGTATATGCCAGCCCAAGTTTGGCCCTTATTGTGGAAAGGATCTGGCTTAGGTATGGCAACTGAATCTGGCTCACAGCTGGCTTTATTGTATAGAATTACAGACATGTAGCATGGGAAGTATGGATAGGCAGACTAACACCACTGTTGAGAAGTGTATAATACACTGTTTTCTTCCAGATCCCCCCAAGAAcacctcagtgtcagtcagtccctctagCTCAGTAGCAGAGGGCAGctctgtggctctgacctgcagCAGCAATGCCAACCCAGCAGTGAATAACTACACCTGGTACAGAGTTGAGGGATGGGAGAAGGACATTGTAGGGTCTGAAGAGAACCTCAACATCTTCAATGTAACCAGGCTTTCAAATGAACAGTACTACTGTGAGGCTCAGAATGTCCATGGACTGCAGAACTCTGAGGCCATCAATATCGATGTgacatTTGCTTCAGAGATCCAGAACACCTCTCGCTGCATCAGGATTTCAGCTACATCTCAGATCAGATGTTTCTGTGATAGCTTTGGAAACCCTGCTCCCACAGTGGTGTGGCAATTGGCTGGAGAGTCTGTCAATCACTCCACTAACACCATCATCAGGGAGGAGCCAATGGGCCGAGCCGGGCTGAGGAGCTCCCTCACCATCCGCCAATCACAGGAAGAGGAAATACCGAGTCTGGTCTGCCTCAGCTCCAACATGGATGGTTTTGACAGCTTCTCATTTAACTTAACATCAATGGAAACATATGAAGTTCAAAAGAATACAAGATAA

Function

NR:

description
myelin-associated glycoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021619801.2 True 867 mRNA 0.47 3 35609629 35610797

Neighbor

gene id symbol gene type direction distance location
LOC118939553 LOC106582593 coding downstream 200 35607541 ~ 35609429 (-)
LOC110488492 LOC106605237 coding downstream 229568 35366832 ~ 35380061 (-)
LOC110488508 LOC106605236 coding downstream 251638 35347843 ~ 35357991 (-)
LOC118939540 NA coding downstream 284947 35307742 ~ 35324682 (-)
LOC110488446 LOC106582421 coding downstream 343981 35240548 ~ 35265648 (-)
LOC110488593 LOC106605167 coding upstream 18752 35629549 ~ 35663662 (-)
LOC110488606 LOC106605166 coding upstream 53451 35664248 ~ 35668411 (-)
drd2l LOC106582624 coding upstream 63494 35674291 ~ 35700846 (-)
LOC110488613 LOC106605164 coding upstream 92085 35702882 ~ 35726314 (-)
LOC118936742 LOC106605187 coding upstream 125534 35736331 ~ 35738872 (-)
G136676 NA non-coding downstream 2144 35606590 ~ 35607485 (-)
G136675 NA non-coding downstream 3069 35605701 ~ 35606560 (-)
G136671 NA non-coding downstream 10601 35598666 ~ 35599028 (-)
G136669 NA non-coding downstream 11896 35597522 ~ 35597733 (-)
G136581 NA non-coding downstream 18341 35591051 ~ 35591288 (-)
G136680 NA non-coding upstream 6446 35617243 ~ 35617497 (-)
G136743 NA non-coding upstream 140564 35751361 ~ 35751639 (-)
G136744 NA non-coding upstream 140963 35751760 ~ 35752076 (-)
G136749 NA non-coding upstream 143477 35754274 ~ 35754488 (-)
G136399 psmc4 other downstream 301900 35306367 ~ 35307729 (-)
G135575 NA other downstream 1005151 34604215 ~ 34604478 (-)
G134668 NA other downstream 1743692 33865488 ~ 33865937 (-)
LOC110487618 LOC100380645 other downstream 2384527 33208500 ~ 33225125 (-)
G134102 NA other downstream 2821508 32748208 ~ 32788121 (-)
G137479 NA other upstream 759207 36370004 ~ 36370328 (-)
G137839 LOC106605146 other upstream 1023396 36634193 ~ 36639005 (-)
G138080 NA other upstream 1215069 36825792 ~ 36828397 (-)
pnrc2 LOC106605140 other upstream 1234136 36844929 ~ 36849373 (-)

Expression


Co-expression Network