LOC110533750 (LOC106584585)


Basic Information

Item Value
gene id LOC110533750
gene name LOC106584585
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35783955 ~ 35785664 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002475033.2
TTGTTGTCGTTAAACAACTGAAAAAATACAACAGATTGTGATCAGATGAACAGTACTTCATTACTTTGACATCTGTATTTAAGAGTGATAGTGATAAGTAGTTGGAGCACTATGTTAAAACTGAATGAGAATTGCAGACAGGGCATTAAACCATGAGTCACGGGAACTGGTAATGCCTTGTTTGCCTTTGGTTCCAGCTAATAATCATTTATTTGAACTTGCAGATAGAAAAGCTCCTGTCTTATCCATGAAGAatgcattggtggatggagcctTATTCCAGGCCAACTGTACTGTCTGGCATTCCtgcccatcctctcctccatcccttcacTGGAGCCGCTTGCCTGTAAATTCTACAGCAGTGACTTCCATGGAGGAAAAGGGAGGGCTGTGGGTGTCTACTGAGACAATACAAGGAAGAGGAACGTGCCAACTGCACAAAAAAGAGATGAAATGCACAGCTCAATTCGCTACAGTACAATCTGAGAGTCAACCAGTCATTCTTAACATCTCATATGCCCCAGTAGGTGTGAAGGTGATGGTGGATGAACAGCCAGTCAGTGAAGGTCATAGTGTCAACCTGGAGTGTGTTGCTGACAGCAACCCCCAGCCAGGCAGGTATATCTGAATCAGACGACAGGGAGGCCAAAGCATCCAAATGAATTCAACTCAGGGCAAAATGTCCTATCCCAACATTAGCAGAGACACCTCATTCTCCTGCATTGTCCAAAATAATATTGGATCAAATCAGTCAGCCTGGCTGTTTCTGGATGTCAACTGATGATCAAGGGAAGCAGTGCTCTCCCATCCTCTTTCACTTCCATCAcaatatacagagaaaatatgGTGTCAACAGAACTCACTGGGCCTGTGGAAAGAGGCCCGAATGTCTCCTGTGTAGCCAGTAACTCACTGGCCACTGACATCCAGCAGCTGCCCCTTGACACAAAATTCACAGCTGGACAGTTTCTGCCATGGATGCTGACTGCTCTGGCAGTTGTAAGTGTCTTTCTGTGGGGAGCTGTAATGTTTGTATGCAGAATACGTTGCAGAGAGAGACCAAAGGCCAGCTCTAATCTCCCCACTTTGGATATCCCTCTAAGGTACTTTCATTTTTGCATCTGTATTTTACATACAACAAATAATAATGTTCAAGCTCATTGACATTGAGATGTTTTTGTCTTTAAGGCAACCTGTCCCTAAGGTACAGCAATCCCCAAAAGTaacataggataaccctttgaagaacccgttTTGGTTCCTAGTAGtactcttttggttccaggtagaacccttttgggttccaggtagt

Function

NR:

description
sialic acid-binding Ig-like lectin 14 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002475033.2 True 1315 mRNA 0.44 4 35783955 35785664

Neighbor

gene id symbol gene type direction distance location
LOC110488629 LOC106605006 coding upstream 5962 35760137 ~ 35777993 (+)
LOC110488622 LOC106605163 coding upstream 32069 35744227 ~ 35751886 (+)
LOC110488583 LOC106582465 coding upstream 210795 35567202 ~ 35573160 (+)
LOC110488573 LOC106605190 coding upstream 229716 35548120 ~ 35554239 (+)
LOC110534853 NA coding upstream 243507 35526086 ~ 35540448 (+)
LOC110488639 LOC106605005 coding downstream 233 35785691 ~ 35788114 (+)
si:ch211-231m23.4 LOC106605003 coding downstream 3397 35789061 ~ 35791241 (+)
LOC110488684 LOC106605158 coding downstream 43313 35828977 ~ 35845886 (+)
LOC100653444 LOC106584591 coding downstream 69539 35855149 ~ 35865269 (+)
iglon5 iglon5 coding downstream 143236 35928900 ~ 36069412 (+)
G136658 NA non-coding upstream 54434 35729233 ~ 35729521 (+)
G136657 NA non-coding upstream 55643 35727239 ~ 35728312 (+)
G136584 NA non-coding upstream 80027 35638113 ~ 35703928 (+)
G136589 LOC106582601 non-coding upstream 147456 35635157 ~ 35636499 (+)
G136610 NA non-coding upstream 151547 35631404 ~ 35632408 (+)
G136789 NA non-coding downstream 26070 35811734 ~ 35813460 (+)
G136805 NA non-coding downstream 94685 35880349 ~ 35887245 (+)
G136842 NA non-coding downstream 139091 35924755 ~ 35924957 (+)
G137053 NA non-coding downstream 304392 36090056 ~ 36090288 (+)
LOC110488391 LOC106582385 other upstream 599959 35180650 ~ 35184002 (+)
lypc LOC106584559 other upstream 630305 35151760 ~ 35153650 (+)
LOC110488281 apom other upstream 783400 34984948 ~ 35000555 (+)
G135920 LOC106605214 other upstream 811154 34972449 ~ 34972801 (+)
G135916 NA other upstream 812024 34971640 ~ 34971931 (+)
G136994 NA other downstream 197168 35982832 ~ 36037741 (+)
G137058 LOC106605156 other downstream 313947 36099611 ~ 36100277 (+)
LOC110488849 LOC106605147 other downstream 596228 36354883 ~ 36405310 (+)

Expression


Co-expression Network