LOC110488639 (LOC106605005)


Basic Information

Item Value
gene id LOC110488639
gene name LOC106605005
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35785691 ~ 35788114 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021560940.2
cctctacaaatactcagccctgccacttccacaccgtcagatcgtaatctctgctcaTTCTGCCCACTCTGACtttggtccctgtctccagtcctaCTTCTCGTcagtcctgctactctgtccttgTCCCCCACTCTACGgttcccttggattcccctctggatctgcttaccctgtcccaacACGTCTCGCTCCAGCTCCGGCCTCCGCACCTGGTTTACTGCAACCTGCCTTAGCTCCCCCTGGCCTGCCCTCAATCTTACccctgtgttttaataaatacatTGGTCACCTCATCCCAGTCACCTGTTCACCTGGGTTCACCTGTTCCGCTTCGCGTGACACAacagggttctaactggaaccaaaaagggttctcctatggggacagctgaagaaccctttggaactctttttctaagagtgtagcaccTTAATTAACCCCCTAGTCAAAGGGACACCTTATGGTGACAGTTATGCAAAACTTCAATGATTTAGGCCCAGTGATGGCTGTTACACTTGGTTTATTACACCGTTGCTTATCTCATTATATACAAACCACCCATTCATTGACTGCTTACTTGTTCTGATAAAATGAGCTATAGAGAACATTTTTTCAAGTAAAAGTAGGAGCATGTAATTAGAAAGAGGTGGACAGTCCTCCCCAACCAAGCTGAGGAGAGAAGTGACTTTAATCTGCACAAATAACTTTCCATGAAGCCTGTGTAGCGGATAGCCTTGGACTTTCCACCATATCCTCTGTTTGATGAACTGTTGATAGCTTGAAAGCCATGGTGGTGAGGAGTGGGGTGATTCTGTCTGTCTACATCATCACCTTCCTGGTTGGCCTGCCTGGCAACATCCTGGCACTTTACGCCTTCAGCGTCAAGATCCACAACAAACCCACTCCCACAGACATCCTCCTGCTCAACCTGACTGTGTCCGACCTTATCTTCCTGCTCTTCCTGCCCCTCAAGATGCACGAGGCAGCCTCCGGCATGGTCTGGACTCTCCCCAGGCTTCTCTGCAACGTTACCTCTTTCGTCTTCTTCTCCACCATCTACACCAGCTCCCTCCTGCTGATGGTGGTCAGTGTTGACCGCTACCTGTGTGTGGCCTTCCCTGTCCAGTACAGGCTCCGCCGCAAGCCCTTGTACGGAGTGGTGAGCAGCCTGGTGGTGTGGGTCTTCAGCTCGGTCCACCTCTGCTTCATCTACATCGTGGAGAACCAGACCTCATCTGATTTATTTACCTGCTATAACAACTTCACCCAGGAGCAGCTGAAGGTGGTGCTTCCCATGCGCTTGGAGCTGTGTGTGGTTCTATACATCGTGCCACTGCTGGTCTGTGTGTTCTGCTACCTGAACTTCATCCTCATCCTCAATAGGACCCCTAACCTTTGTGCAGAGAAAAGGAAGAGAGCCGTCGGAATGGCTGTGGGGACCTTGCTTGTTTTTGTTGTCTGCTTCCTGCCCTATAATGTCACCCATGTACAGGGGTTCATCATCCAAGACAACGTGGAGTGGCGGCTCTACGCTCTGCTCCTGACCACGGTCAACACCGTCCTGGATCCTGTGACGTtctacttctcctcctccatgttccAGGCCACCATGAAGAGGATCCTAACTGGGAAGCGAAGGAACAGCACCCCTGGTGTCTTCATGACAGCTCAAAACAACACTAGAGACATAGAGGGACACTGTAACCCAGCCACAACTGAGGGAGGTTTGTCTGACAAGTGACAGAGC
>TU157479
gaacccaaaaggattctacctggaaccccaaATTtgacatctgctcctgccacgccctctactgctcatccggtgtctccttgacctgcctccactcccccagtgctctttccttttctgtgtgtgtgtgtgattgtgtgggcagagacaggtgtgctggagtcagagcagatccccaccagctgcaacctgttccataatcaagacctctacaaatactcagccctgccacttccacaccgtcagatcgtaatctctgctcaTTCTGCCCACTCTGACtttggtccctgtctccagtcctaCTTCTCGTcagtcctgctactctgtccttgTCCCCCACTCTACGgttcccttggattcccctctggatctgcttaccctgtcccaacACGTCTCGCTCCAGCTCCGGCCTCCGCACCTGGTTTACTGCAACCTGCCTTAGCTCCCCCTGGCCTGCCCTCAATCTTACccctgtgttttaataaatacatTGGTCACCTCATCCCAGTCACCTGTTCACCTGGGTTCACCTGTTCCGCTTCGCGTGACACAacagggttctaactggaaccaaaaagggttctcctatggggacagctgaagaaccctttggaactctttttctaagagtgtagcaccTTAATTAACCCCCTAGTCAAAGGGACACCTTATGGTGACAGTTATGCAAAACTTCAATGATTTAGGCCCAGTGATGGCTGTTACACTTGGTTTATTACACCGTTGCTTATCTCATTATATACAAACCACCCATTCATTGACTGCTTACTTGTTCTGATAAAATGAGCTATAGAGAACATTTTTTCAAGTAAAAGTAGGAGCATGTAATTAGAAAGAGGTGGACAGTCCTCCCCAACCAAGCTGAGGAGAGAAGTGACTTTAATCTGCACAAATAACTTTCCATGAAGCCTGTGTAGCGGATAGCCTTGGACTTTCCACCATATCCTCTGTTTGATGAACTGTTGATAGCTTGAAAGCCATGGTGGTGAGGAGTGGGGTGATTCTGTCTGTCTACATCATCACCTTCCTGGTTGGCCTGCCTGGCAACATCCTGGCACTTTACGCCTTCAGCGTCAAGATCCACAACAAACCCACTCCCACAGACATCCTCCTGCTCAACCTGACTGTGTCCGACCTTATCTTCCTGCTCTTCCTGCCCCTCAAGATGCACGAGGCAGCCTCCGGCATGGTCTGGACTCTCCCCAGGCTTCTCTGCAACGTTACCTCTTTCGTCTTCTTCTCCACCATCTACACCAGCTCCCTCCTGCTGATGGTGGTCAGTGTTGACCGCTACC

Function

NR:

description
free fatty acid receptor 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021560940.2 False 1751 mRNA 0.51 3 35785897 35788114
TU157479 True 1313 TUCP 0.50 3 35785691 35787470

Neighbor

gene id symbol gene type direction distance location
LOC110533750 LOC106584585 coding upstream 233 35783955 ~ 35785664 (+)
LOC110488629 LOC106605006 coding upstream 7904 35760137 ~ 35777993 (+)
LOC110488622 LOC106605163 coding upstream 34011 35744227 ~ 35751886 (+)
LOC110488583 LOC106582465 coding upstream 212737 35567202 ~ 35573160 (+)
LOC110488573 LOC106605190 coding upstream 231658 35548120 ~ 35554239 (+)
si:ch211-231m23.4 LOC106605003 coding downstream 947 35789061 ~ 35791241 (+)
LOC110488684 LOC106605158 coding downstream 40863 35828977 ~ 35845886 (+)
LOC100653444 LOC106584591 coding downstream 67089 35855149 ~ 35865269 (+)
iglon5 iglon5 coding downstream 140786 35928900 ~ 36069412 (+)
LOC110488747 LOC106605155 coding downstream 321175 36109289 ~ 36113122 (+)
G136658 NA non-coding upstream 56376 35729233 ~ 35729521 (+)
G136657 NA non-coding upstream 57585 35727239 ~ 35728312 (+)
G136584 NA non-coding upstream 81969 35638113 ~ 35703928 (+)
G136589 LOC106582601 non-coding upstream 149398 35635157 ~ 35636499 (+)
G136610 NA non-coding upstream 153489 35631404 ~ 35632408 (+)
G136789 NA non-coding downstream 23620 35811734 ~ 35813460 (+)
G136805 NA non-coding downstream 92235 35880349 ~ 35887245 (+)
G136842 NA non-coding downstream 136641 35924755 ~ 35924957 (+)
G137053 NA non-coding downstream 301942 36090056 ~ 36090288 (+)
LOC110488391 LOC106582385 other upstream 601901 35180650 ~ 35184002 (+)
lypc LOC106584559 other upstream 632247 35151760 ~ 35153650 (+)
LOC110488281 apom other upstream 785342 34984948 ~ 35000555 (+)
G135920 LOC106605214 other upstream 813096 34972449 ~ 34972801 (+)
G135916 NA other upstream 813966 34971640 ~ 34971931 (+)
G136994 NA other downstream 194718 35982832 ~ 36037741 (+)
G137058 LOC106605156 other downstream 311497 36099611 ~ 36100277 (+)
LOC110488849 LOC106605147 other downstream 593778 36354883 ~ 36405310 (+)
G139004 NA other downstream 1988947 37777061 ~ 37824010 (+)

Expression


Co-expression Network