si:ch211-231m23.4 (LOC106605003)


Basic Information

Item Value
gene id si:ch211-231m23.4
gene name LOC106605003
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35789061 ~ 35791241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021560951.2
CTTCAGAGCCATGGTGTGGGTGAAAAGTGAGGTGATTCTATCCGTCTACATCATCACCTTCCTGATTGGCCTGCCTGCCAACATCCTGGCACTCTACGCCTTCAGCGTCAAGATCCATAACAAACCCACTCCCACAGACATCCTCCTGCTCAACCTGATTGTGTCcgacctcctctttcttctcttcctGCCTCTCAAGATGTACGAGGCGGCCTCCGGCATGCTGTGGAACCTGCCCGAGTTCCTCTGCTCCATCACTTCCTACACCTTCTTCTCCACTATCTACACCAGTTCTCTCCTGTTGATGGCTGTCAGTGTGGTCCGTTACCTGGCGGTGGCCTATCCCATCGCCTACCACCAACTTCACAAACCGTTCTATTCTGTGGTGGCCAGCACAATCATCTGGCTTCTCTCCACCGCCCACTGCAGCATCGTGTTCATCATCCAGCACCATCCGGACCTCTCCCCAAGCAACACCTCCGTCTGCTACGAGGACTTCACCGAACAACAGCTGGCCATCCTCCTCCCGGTGCGTCTGGAGTTCTTCATCATGCTCTGCTTGGTTCCTCTCATAGTTTGCGTCTTCTGCTACCTCCGCTGTATCTGGATCCTGTACACGCTCCCCAGGATCAGCCCGGGCCAGAAGCAGAAGGCCATCGGGATGGCGCTGGGTACTCTGGCCGTCTTCCTTGTGTGTGTCTTTCCCTACAACTTCTCCCATGTGCTGGGTTTTTTCACAGGCTCCAGCCCCTCGTGGAGGTACTACACCCTGCTGCTTAGCGCCTTCAACACTTGCCTGGACCCTATCATCTTCTACTTCTCCTCCTCTGCTTTCCGCATCACTACCAAGATGGCCATCTGCAAGATGCTGGGACTGCGACAGGGTCAGGCTGCAGTCCAAAGGGAAAGCACAATAGCCAATATTGGCCAAGAGTAGAAAATGTAATCACCTTACTCCAAGGTGCCTTTTGGGTAATTTTGTTAAAAATAACTATTCATTTCACCAATTGTTTTAATTCTATCATAAAGAGCAAATGTTCAACttcattcaaaaaaacatgttttcccatctcaagaggttcaaTTAAGAAGAATAACTATACAAATTCAAATTAAAGTGACAGGATTGACTGTAATAGGGTTAACAATGTTATCTTAAATCCGCCATAACTCCCTTTGTGACAGGGTGAATGGAAGCATGTTGTGTGCAGCAGCGGGAGGCAATTGCAATGCAAGTTCAACAAAAACATTTCTAGTAACTTGttgaaaacatttctagcctatctatctatgggtaacacaGGGTTGATGGGTTATGCTCGACGTGTTTTCCAGCACAAAGCAAATGGCCTAAAaaagtagaaccagctcacctgcttttacactatgatatGGCTATATTACCAGATGGTACGTTTTTCTTTGGATTCAATCATTTAAAATCTAATAGTTTTACCATATTAAAACGTGAGTTCAGGTCATGTTACAGGGTTAACATAAACCTGAGGGACAAATGTAAATTAATCATTAAATAAGTAGGAATCTTCAGACATTACTTTCCTAAAGTAACAAAATAACTTGGACTTAACTTGGACGTAATTAAGTAGATATATTTCGTAGAAGGTGAACAAAGATGACATTGGACATGCCAAATGGGGATTTTCAGAGAGAAACAAATACCTTACTTTAATGAAAACACACTGCTATTAGAatgtgtaaataaataaaaataaaaaaagtcttGGCTTAGTTAAAGCATAGATGCATGTGATTCCATTGAAATGACAAAAGGCACTCTATTCGTGGAGAGACCTAGCTATGTGCAGTATATTTCAAGATAATATGTAGTTTGTGTTTTACACATTTCTGTGAACTGTACCTTTCTTGCCAAAGTCATTCATATTTAAATGTTCAAAAGTTTACATTCCATTTACAAAAGTGAGCACTTCATACATGATTCATTTGTTTCATCACAGTAGCTTCTGTTACACTTTTGAATTGCACACTATGTGAAAGCTTGGTTGTTACCCTTTAAAATTATGAATTTGTTTGGTTAGAGTATGTGCTGTGTTACCTATTTTAATTGACACATAATGCTAAATATTTTCTACCTCCATTTGTATTGGCATGAATCAGCTAACACATTTGTGTTGCAAAGACCTTTCTGTATTCAAGAGTTTC

Function

NR:

description
free fatty acid receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021560951.2 True 2181 mRNA 0.42 1 35789061 35791241

Neighbor

gene id symbol gene type direction distance location
LOC110488639 LOC106605005 coding upstream 947 35785691 ~ 35788114 (+)
LOC110533750 LOC106584585 coding upstream 3397 35783955 ~ 35785664 (+)
LOC110488629 LOC106605006 coding upstream 11068 35760137 ~ 35777993 (+)
LOC110488622 LOC106605163 coding upstream 37175 35744227 ~ 35751886 (+)
LOC110488583 LOC106582465 coding upstream 215901 35567202 ~ 35573160 (+)
LOC110488684 LOC106605158 coding downstream 37736 35828977 ~ 35845886 (+)
LOC100653444 LOC106584591 coding downstream 63962 35855149 ~ 35865269 (+)
iglon5 iglon5 coding downstream 137659 35928900 ~ 36069412 (+)
LOC110488747 LOC106605155 coding downstream 318048 36109289 ~ 36113122 (+)
LOC110533753 LOC106605184 coding downstream 326825 36118066 ~ 36123229 (+)
G136658 NA non-coding upstream 59540 35729233 ~ 35729521 (+)
G136657 NA non-coding upstream 60749 35727239 ~ 35728312 (+)
G136584 NA non-coding upstream 85133 35638113 ~ 35703928 (+)
G136589 LOC106582601 non-coding upstream 152562 35635157 ~ 35636499 (+)
G136610 NA non-coding upstream 156653 35631404 ~ 35632408 (+)
G136789 NA non-coding downstream 20493 35811734 ~ 35813460 (+)
G136805 NA non-coding downstream 89108 35880349 ~ 35887245 (+)
G136842 NA non-coding downstream 133514 35924755 ~ 35924957 (+)
G137053 NA non-coding downstream 298815 36090056 ~ 36090288 (+)
LOC110488391 LOC106582385 other upstream 605065 35180650 ~ 35184002 (+)
lypc LOC106584559 other upstream 635411 35151760 ~ 35153650 (+)
LOC110488281 apom other upstream 788506 34984948 ~ 35000555 (+)
G135920 LOC106605214 other upstream 816260 34972449 ~ 34972801 (+)
G136994 NA other downstream 191591 35982832 ~ 36037741 (+)
G137058 LOC106605156 other downstream 308370 36099611 ~ 36100277 (+)
LOC110488849 LOC106605147 other downstream 590651 36354883 ~ 36405310 (+)
G139004 NA other downstream 1985820 37777061 ~ 37824010 (+)

Expression


Co-expression Network